Dermochelys coriacea (leatherback sea turtle): 119858307
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Entry
119858307 CDS
T09064
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X8
KO
K06084
F-box protein 20
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04517
IgSF CAM signaling
dcc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119858307 (LMO7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119858307 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119858307 (LMO7)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119858307 (LMO7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119858307
NCBI-ProteinID:
XP_038264522
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All DBs
Position
1
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AA seq
1389 aa
AA seq
DB search
MEGREDAEGSCDVAFAEAQRWVEAVTGKSFGTKDFRAALENGVLLCNLINRIKPGIIKKI
NRLSTPIAGLDNINVFLKACENIGLKEAQLFHPGDLQDLSSRVTVKQEETDRRLKNVLIT
LYWLGRKAKNNPGYNGPYLNLKAFEKLLGQALTRALEESSSLKSSGRDSGYGDIWYIDRG
EAFSPSTSHKRDDSFDSLDSFGSRSSTSFSSDITLKGGSEGCESDTDSELPYKMHDSGKD
DMSYRRTAVIEPKPTTEFNRFLPSKTKQASYMPAPLRKKRTEKNEDNRRSWASPVFTEPD
GTFSRSKSLNDVSADEAQMLRQVRYEELQKIKSKLQEQDQKWQDDLAKWKNRRKSFTSDL
QKKKEEREEIERRASENSERNSKSLKEMQQDRENRDQGSYSDKQQKSERSRMYLSDDVFS
EEKHPSRPSVAKDYLVEEDASYSFKKNEKSYAAQTNKENSQKLESYATVETQIPSKSLLE
EQSSVPLSTHHSMNEQMGSAQVSASLPRSYQKTDTSRLTSVVTPRPFGVPSRGISSLPRS
FMVDDVQKYNGEVDGAKRSQTLLTSYSFSTLEAGPLLSADAMTNGGEEEKESIKRKESPT
LRASATSQYQDAVSPDLKSEYYTHPDPVTVAASVEIRSLPEPEVSVSQDQYSEMRISINQ
RSGNSRNFGFTTNWKPSGVFVQTIEEGSTADLGQLQVDDEIIAVDGARVSQMDHNQWEEA
MANALETGNLVMDVRRYGKNDWGKDQPSLPYVRHKILNLTSMATNIVGTPENKWIDATSG
DHNSTNSSDISAKRDFSYSLQNSDAGAKVINGMQADMSSNEQKESEPISLKNLKRRSQFF
EQGGSEPAVSDLLVPSINAPSRWTWDQEEERKRQEKWQKEQERLLQEKYKREQEKLREEW
LHAQQEAERESSKYLDEEPTVLTLNAVSVPAHAPPISSWRTNMGEDIDVLKGGRKHEWGE
PQQNEEEKEMERRRLQEERRLQEEKALHLEQKRKAQELELEREQKEKEQQYAEEQKRRAE
AEEQKRRMEKEREIPIQMPQYRRHYDHYEVSKNFEDPSGHFLADRNKSRSTSELDDYPRS
RNGEYGKPLGGIAQWLLQDELNRKQSTKTLQKAKEPELEAKRKQMVYQMEHANPDQGTNN
KYLEKSWNVSDSQKGSQKEHAPSSAEIERQHILQEMRKKTSLHTDNSWIRQRSSSVHKDP
VNLHKNTMKRGESLDNLDSSRTSSWRHPPWTNQSASSTSLSSNQDFSRSAAPLVSTSNRA
YMRTPSSSVALPSASSGRSATSSHSFPSAPSSVPRAQFPTSASQSGAQQRNRSVSGKKIC
SYCNNVLGKGAAMIIESLGLCYHLHCFKCTACACDLGGSHSGAEVRIRNNELFCNDCYVK
FKTGQPTSM
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagagaggatgccgagggcagctgcgatgtagcttttgcggaagcccagaga
tgggtagaggcagtcactgggaaaagttttggaaccaaagattttcgagcagctttagaa
aatggagtcctgttgtgcaatttgattaacaggatcaaacctggcatcattaagaagatc
aatcgtctgtctactccaatagctggtttggataatataaatgtttttctgaaagcttgt
gaaaatattggattgaaagaagctcagctctttcatcctggggatcttcaggatttgtcc
agtcgagttactgtcaagcaagaagagaccgatagaagactcaaaaatgttttgattaca
ttatactggctggggaggaaagcaaaaaacaaccctggttacaatggtccataccttaac
cttaaagcatttgagaaattactaggacaagctctgaccagggccctcgaagaatccagc
agtctgaaaagcagtggcagggatagcgggtacggtgatatttggtacattgaccgtgga
gaagcattttcaccttccactagccataaaagagacgattctttcgatagcctggactcc
tttggttcaagatcctccacaagcttttcatcagatataaccttgaagggtggcagtgaa
ggttgcgaaagtgacacggactctgaactgccttacaaaatgcatgattctggcaaagat
gacatgtcatatcgcaggactgctgtgattgaaccaaaacctactacagagttcaatcgt
ttcttacccagcaaaaccaaacaggcatcatatatgccagcaccgctcaggaaaaaaagg
acagagaagaatgaggacaacagaagaagctgggcaagtcctgtcttcactgagccagat
ggaacattttcaaggagcaagtctttgaatgatgtcagtgcagatgaggcccaaatgctg
cgccaggttcgttatgaagagctacagaaaataaaatccaagctacaggaacaagatcaa
aagtggcaagatgatctagcgaaatggaaaaatcgtcgaaaaagtttcacttcagatttg
cagaagaaaaaggaggagagagaagaaatcgaaaggagagcctctgagaattctgaaaga
aatagcaagtcactgaaagaaatgcagcaggacagggagaacagagatcaaggatcctac
agcgacaagcagcaaaagagtgaacgtagtcgaatgtatttatcagatgatgtatttagt
gaagaaaaacatccttccagaccatcagtcgcaaaagattatcttgttgaagaagatgcc
tcttacagttttaagaagaatgaaaaatcgtatgctgcacaaactaacaaagagaattct
caaaagctagagagctatgcaacagttgaaactcaaattccatctaaaagccttttagaa
gaacagagctcagtccctttgtctactcaccattcaatgaatgaacaaatgggatcagct
caggtttcagcttctctccccagaagttaccagaaaacagatacttctaggttaacatct
gtggttacaccaagaccttttggtgtcccctcgagaggaatttcatcacttcccagatca
tttatggtggacgatgtccagaaatataatggagaagtagatggagccaagagatctcaa
actttgctcaccagctattcattttcaacactggaagcaggaccacttctctctgcagat
gcaatgacaaatggtggtgaggaagaaaaggaaagcattaaaagaaaagagtctcctacc
ctgagagcctctgctacatcccaataccaggatgcagtgtcccctgatcttaaatcagag
tattatactcatcctgaccctgttacagttgcagcttctgtggaaataagaagcctgcca
gagccagaggtttcagtgtcacaggaccagtacagtgaaatgagaatcagtataaaccag
agatctggtaatagtcgcaactttgggttcaccacaaattggaaaccttctggggttttt
gtacagacaattgaagaaggtagcactgcagaccttggccagctgcaagtagatgatgaa
atcattgctgttgatggcgcaagagtttcacaaatggaccataatcagtgggaggaagcc
atggccaatgcactagaaactggaaacttggtcatggatgtcagacgatatggaaaaaat
gattggggcaaagaccagccttccctgccatatgtaaggcataaaatcctcaatctcacc
agtatggctaccaacattgtaggtacacctgaaaataaatggattgatgcaacttctgga
gatcacaattctaccaactcttcagacatatcagccaaaagagatttctcctacagcctt
caaaattctgatgctggagcaaaagtgataaatggaatgcaagcagatatgagctctaat
gagcaaaaagaatctgaacctatttctttgaaaaacttaaaaagacggtcacaatttttt
gaacaaggaggctcagagcctgcagtgtctgatctcctagttccatctattaatgctccg
agtcgttggacttgggaccaagaagaagagagaaaacgacaggaaaaatggcagaaagaa
caggaacgtttacttcaggagaaatacaaacgtgaacaggagaaattacgggaagaatgg
ctacacgctcagcaagaagcagaaagagagagttccaaatatttagatgaggagccgact
gtcctaaccttaaacgcggtatcggtacctgcacatgcaccacctatttctagctggaga
acaaacatgggagaagacattgatgttcttaaaggaggccgaaaacatgagtggggggaa
ccgcagcagaatgaggaagagaaggaaatggaaaggaggagactccaggaggaaagaaga
cttcaagaggaaaaagccctgcatttggagcaaaaaaggaaagcccaagaactagagctt
gaaagagagcagaaagaaaaggaacaacaatatgccgaagagcagaagcggcgagcagag
gccgaggagcagaagcggcgcatggaaaaagaaagggagataccaatacagatgccccaa
taccgaagacattatgaccattatgaagtatctaaaaactttgaagatccatctggccac
tttcttgctgacagaaataaatccagatcgacttcagaactggatgattaccccagaagt
cgaaatggtgaatatggaaaaccattaggtggtattgcccaatggctgttgcaagatgag
ttaaaccgaaagcaaagtacgaagactctgcaaaaggcaaaagaaccagagctggaggct
aaaagaaaacaaatggtttatcagatggaacatgctaacccagaccaaggtacaaacaac
aaatatttggaaaagtcttggaatgtcagtgattcacagaaggggtctcagaaagagcat
gccccgtcttcagcagaaatagagagacaacatatccttcaggaaatgagaaagaaaaca
tcactacatacagacaacagctggattaggcagcgtagttctagtgtgcataaggaccct
gttaatcttcacaagaatacaatgaagagaggtgaatctttagataatcttgattcctca
agaacaagttcatggagacatccaccttggacgaatcaatctgcctcttccacatccttg
tcgtctaatcaagattttagtcgctctgctgctccactagtgtctacttcgaaccgagct
tacatgcgtaccccctcctccagtgtagcacttccttcagccagctctggaagatcagca
acttcgtcccacagtttcccctcagcaccttcttctgtacctcgtgctcagtttcctacc
tctgcttcccaatcaggagctcagcagcggaataggtcagtcagtgggaagaaaatatgt
tcatactgtaataacgttctgggcaaaggagcagccatgatcatcgaatctcttggtctt
tgttatcatttacattgttttaagtgcacggcttgtgcatgcgacctcggaggctcacac
tcaggagctgaagtcaggatccgaaacaatgaactcttctgcaacgactgctatgtcaaa
tttaaaactggacagccaacctccatgtga
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integrated database retrieval system
