Dermochelys coriacea (leatherback sea turtle): 119858346
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Entry
119858346 CDS
T09064
Symbol
VCL
Name
(RefSeq) vinculin isoform X2
KO
K05700
vinculin
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04510
Focal adhesion
dcc04520
Adherens junction
dcc04810
Regulation of actin cytoskeleton
dcc04820
Cytoskeleton in muscle cells
dcc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119858346 (VCL)
04520 Adherens junction
119858346 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119858346 (VCL)
04810 Regulation of actin cytoskeleton
119858346 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119858346 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcc04812
]
119858346 (VCL)
04147 Exosome [BR:
dcc04147
]
119858346 (VCL)
Cytoskeleton proteins [BR:
dcc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119858346 (VCL)
Exosome [BR:
dcc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119858346 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
119858346
NCBI-ProteinID:
XP_038264670
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All DBs
Position
7:61582245..61697554
Genome browser
AA seq
1067 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKSSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLKDPNASPGDPGEQAIR
QILDEAGKVGELCAGKERREILGTCKTLGQMTDQVADFRVRGQGATPMAIQKAQQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEQIRGIMAEARKIAE
LCEDPKDRDDILRSLGEISALTAKLSDLRRHGKGDSPEARVLAKQVATSLQNLQSKTNRV
VANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANAMIGPYRQD
LLAKCDRVEQLAAQLADLAARGEGESPQARAIATQLQDSLKDLKTRMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPPDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVEG
IQAAVKSARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKKEVENSEDPKFR
EAVKAASDDLSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPPDIEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMM
MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGVSGNKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacccgcaccatcgagagcatcctggagcccgtggcgcagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggcaaggccattccggacctg
accgcccccgtggccgcagtgcaggccgccgtcagcaacctggtccgggttggaaaagaa
acagtgcagacaaccgaagaccagattttgaaaagggacatgccaccagcctttatcaaa
gtggagaatgcctgcactaaacttgtccaggcagcccagatgctgcaagcagatccttat
tcagtacctgctcgtgattatctcattgatggatcaagaggcatcctctccggtacatca
gacttgcttctgacgtttgatgaggctgaggtccgtaaaatcatccgtgtctgcaaagga
attttggaatacctaactgtagcagaggtggtagagactatggaggatttggtgacatac
acaaagaatctgggtccaggaatgacaaagatggccaaaatgattgatgaaagacagcag
gaattgactcatcaggaacacagagtgatgttggtgaactccatgaacactgtgaaggag
ctgttgccagtccttatttcagctatgaagatttttgtaactactaaaagttccaaaagc
caaggaatagaagaggccttgaaaaaccgcaatttcacagtagagaagatgagtgctgaa
ataaatgagatcatccgggtgttacagctcacttcctgggatgaggatgcctgggctagc
aaggacactgaagctatgaagagagctttggccttaatagattccaagatgaaccaggca
aagggctggctaaaggatcccaatgcatcaccaggggatcctggtgagcaagctataagg
cagatccttgatgaagccggaaaagtgggagaactgtgtgcaggcaaagaacgcagagag
attctgggaacctgtaagacgctaggccagatgactgatcaagtggctgatttccgagtt
agaggacaaggtgctacaccaatggccattcagaaagcccagcaggtgtctcaaggtctg
gatttgcttacagcaaaagtggaaaatgcagcccgcaaactggaggccatgaccaactct
aagcaggcgattgctaaaaaaattgatgctgctcagaactggctcgcagacccgaatggg
ggaagtgaaggggaagaacaaattcggggaattatggccgaagccaggaaaattgcagaa
ctgtgtgaggaccccaaagacagagatgacattctgcgttccctgggagaaatctctgct
ctgacagctaaactgtcagatctacgaagacatgggaaaggagactctccagaggcccgg
gtactggctaagcaagtagctacatcactgcagaatttacagtctaaaacgaacagggta
gtagcaaacaccaggccagttaaggcagctgttcatttggagggcaagattgagcaagct
caaaggtggattgacaatccgacagttgatgaccgtggagtaggccaggctgcaatccgg
ggactggtggctgaaggtcgtcgtttagccaatgccatgataggaccttatcgtcaagac
ctccttgccaaatgtgatcgtgtagaacagctggctgcccagctagctgatctggcagca
agaggagaaggagagtcacctcaggctagggcgattgccactcagctccaggattctttg
aaggatctgaaaacaaggatgcaagaagctatgacccaggaggtttctgatatttttagt
gacactacaaccccaattaaactattggcagtggcagccactgcacctcctgatgcaccc
aatagggatgaggtgtttgatgaaagggcagcaaactttgaaaaccatgctgctagactt
ggagcaacagcagaaaaagcagctgctgttggaactgctaataaaaccacagtagaaggc
attcaagcagctgtgaaatcagccagagaactcacaccgcaggtaatatcagctgctcgt
atcctcttaagaaaccctggaaatcaagctgcttatgaacattttgagaccatgaaaaac
caatggattgataatgtggaaaaaatgacaggattggtagatgaagcaattgatactaag
tctctgttggacgcatcagaagaagctattaagaaagacctagataaatgtaaagttgca
atggccaatatccaacctcagatgcttgtagctggtgccaccagcattgctcggcgagca
aaccgaatcctgttggtggcaaagaaggaagttgaaaattcagaagatcccaaattccgt
gaagctgttaaggcagcctctgacgacctaagcaaaactatatcaccaatggtaatggat
gctaaagctgtggcaggaaacatttctgatcctggtttgcagaagagcttcctggattct
ggatataggattctgggagctgtggcaaaagtcagagaagccttccagcctcaagaacct
gatttccctcctcctcccccccctgacattgagcagcttcatctgactgatgaacttgcg
cctccaaaaccaccccttccagagggtgaagttccaccacccagaccacctcctcccgaa
gagaaagatgaagagttcccagagcagaaagcgggagaagtgattaatcagcccatgatg
atggctgctaggcagctacatgatgaagcccgaaaatggtctagcaagggtaatgatata
attgctgctgcgaagcgaatggccctgctgatggcagagatgtcccgcctagtgagaggt
gtcagtggaaacaagcgtgcccttattcagtgtgccaaggatattgctaaagcatcggat
gaagtgactcgattggctaaggaggtggcaaagcagtgcaccgacaagcgcattcgaaca
aaccttttgcaggtctgtgagcgaatcccaaccatcagcacccaactcaaaatcctctcc
actgttaaagctacaatgttgggcaggacgaacatcagtgatgaggagtcagaacaggct
actgagatgttggttcacaatgcccagaaccttatgcaatctgtaaaggaaactgtgaga
gaagcggaagcagcgtctattaagattagaacagatgctggattcactcttcgctgggtt
agaaagactccttggtatcagtaa
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