Dermochelys coriacea (leatherback sea turtle): 119858444
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Entry
119858444 CDS
T09064
Symbol
CCDC88B
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil domain-containing protein 88B
KO
K25392
girdin
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dcc03037
]
119858444 (CCDC88B)
Cilium and associated proteins [BR:
dcc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119858444 (CCDC88B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
119858444
NCBI-ProteinID:
XP_043374593
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All DBs
Position
7:complement(30967105..30996440)
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AA seq
1518 aa
AA seq
DB search
MGDPSLWIGVQSKPPTLAALGSPIAPKLGVGSDLPAAFRGFPPPTHSRSAVGAGFLASLQ
APPTPAAPHPVIAEVPLCAARKTRAGGAWLGWGGADAPVCRGPLCGTCTNHRDPSRGWMG
TGVAWRAWRTLSQVPLLHGPTPWRARPPQSQEGDERLRLQTLQVLLQQLRAFYQDDLQQL
ILMTPPNVQLLAREPLTEQGIKEMRKLLLLLLGAAVQCERKAEILERIQGDIETRLDALA
SAIQEVRTPTGGGLSLQWGALAELHPLELTRVXQDLSSRLRSLVGRSGIQCERLWELQQE
RELSSPHGPLSPEGPXDNRQHLGVQTGXCQGKARRLRQELEEKAEELLDQHQEXQELEAE
LRRLRQEHQAVVGEXRLAGLYRDELDAMREKAARAERLQGELSALRERLPALERCQGKLK
EERAFSQALLDSNAQLEGQLESARARAQRLSQLEKENLLLRSQLEQVEEEQERERQRLEE
LQQEKVLLEGELRQNLGVPQHLSWEEEQEPSEAPNDIAETPKSLSYEXTEVTSSRXLALE
RENQELRRRLQQALEAPGEPRSPGLEQKNKALSKEVQRLGAELEAQRARSCQEREELSAA
LLGEKEQLERELHSLQEQRHCQQESLQSQGDPGAWAQEQQEALAESGRQLCQVEEQASSL
QEALRRLEATHAKALEGLTASQEARGRLEQELLRLRQELEQQRLEALLLGQLEAEAQVLE
KEREALRAELSQAERELAEARSSLEAERQRAGRQAEQAREAAEELRASERELGTLQRGLE
QHKAALAQLEGERGALEAVLSQAXRERRALDKEXRRLRAQTQAQEEALAEQGRRAAQLEA
QSRLQALELGGLRERVQRLRELEQESKGLREQLAAERKAAAALREELLGEKVKGQEREAD
LVRLREQLERREEEQRLLEEQQGTQQSQYQSLEXRLESSFREMLALKEEKIGALRSRVEE
LLTLNQHLGKQLRQVKSSPGXPPPEAVGAVQQGQGXPEPTLGLRAELESDTLSKHLIEGS
AAXNAALLAEKEALMGRLGQLESQLGALQGELLSLQGQSXGLREESGRLQAQCGALQVEQ
AALRSQKAALEARRRSXGERLAGLEAEVRAARQERDEWRGRHEGLVRNHDKLALLHERQG
AELEGLLGKQAGLKGALRALEQEHRELQDRHSHLVAQQAGLEQRETALRGERERLEGAER
EHRQLGEQHARLQDEHARVQAALAAAERAQEEQQGELRGLRGRLTGLQLEQARLEAEGTA
LREQNHQLEVALGRIGDQCELLAQLKGNQEEENRHLLQEIQKLSKENRTLLERSMESREQ
YHSEQRQHLDKLNELRREKQKLVEKIMDQYRVLEPALPKSKKSNWIADMMKKLMKPRREP
CREQQRPXAEGPNSIENLPGLGQDGRAPDGDSSTPASPVPLRKASSMLSLPDTQRMYLRL
NRRKLSSRVLVSESFGPGDAXPRQRFRQRQRPLAFLGGSCEEAAVSWEPQEGQRLPSAGS
EGEARGGGGTRKRRARAM
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgggagacccatccctttggatcggggttcagagcaagcctcccaccctagcagcattg
gggtccccaattgcccccaagctgggggtggggagcgacctaccggcagctttcaggggt
ttccctcctcccacccacagcaggtctgctgtgggtgctggtttcctggcgtccctgcag
gccccccccaccccagccgctccccaccctgtgattgcggaagttcctctttgcgcagcg
cggaaaaccagagcggggggagcctggctggggtgggggggagcagacgcacctgtgtgc
aggggccctctttgtgggacctgcaccaaccacagagacccaagcagaggatggatgggg
acgggcgtggcttggagagcctggaggactttgtctcaggtccccttgttacatggaccg
accccttggcgtgcccggccaccccagagccaggagggtgacgagaggctgcgactccag
accctgcaggtcctgctgcagcagcttcgtgctttctaccaggatgatctgcagcagctg
attctaatgactccccctaatgtgcagcttctcgccagagagcccctgacagagcagggc
atcaaggagatgcggaagctgctgctgctgctgctgggggctgctgtgcagtgtgagcgg
aaggcagagatccttgaacggatccagggggacatcgagaccagactcgacgcgctggcc
agtgccatccaggaggtaagaacacccaccggtggtgggctgagcctgcagtggggggcg
ctggctgagctgcaccccctggagctgacacgggtcncgcaggatctgtcctcccggctg
cggagtctggtagggcggagcgggatacaatgcgagaggctgtgggagctgcagcaggag
cgagagttgtcgtccccccatgggccactgtcccccgaggggccgnnggacaatcgccag
caccttggggtgcaaactggctgatgccagggcaaggcccggcgcctgcgccaggaactg
gaggagaaggctgaggagctgctggatcagcaccaggagntgcaggagctggaggccgag
ctgaggaggctgcgacaggagcaccaggcggtggtgggtgagnngcgcctggcgggcctg
taccgggatgagctggatgccatgcgggagaaggcggcccgggctgagcgcctgcagggg
gagctctcggccctgagggagcgactacctgcgttggagcggtgccaggggaaactgaag
gaggagcgggccttctcccaggccctgctggacagcaacgcccagctggaggggcagctg
gaatctgcccgcgcccgggcccagcgcctgtcccagctcgagaaggagaatctactgctg
cggagtcaattagaacaagttgaggaggagcaggagcgggagcgtcagcggctggaggag
ctgcagcaggagaaggtgttgctggagggggagctgaggcagaatctgggggtgccccag
cacctgtcctgggaagaggagcaggagcccagtgaggctcccaatgacattgctgagact
cccaagtccctgagctacgagnngaccgaggtgacatccagccgtnngctagcactggag
cgggagaaccaggagctgcgccggaggctgcagcaggcactagaggccccgggagaaccc
aggagtccgggccttgagcagaagaataaggccctcagcaaagaggtgcagcggctgggg
gcagagctggaagcccagcgggcccggagctgccaggagcgggaggagctgagtgccgcc
ctgctgggggagaaggagcagctggagcgggagctgcacagcttgcaggagcagcggcac
tgccagcaggagtctctgcagagccagggggacccaggcgcctgggcccaggagcagcag
gaggcactggcagagagtgggcgccagctgtgccaggtggaggagcaggcatccagcctg
caggaggcattgcgccggctggaggccactcatgccaaggccctggaggggctgacggcc
tcccaggaggcccggggccgcctggagcaggagctgctgagactgcggcaggagctggag
cagcagcgcctggaggccctgcttctggggcagctggaggccgaggcccaggtgctggag
aaggagcgggaggcgctgcgggcagagttgagccaagccgagcgggagctggcggaggcc
cggagcagtctggaggcagagcggcagcgggccgggcgccaggctgaacaggcgcgggag
gccgcggaggagttacgggcgtccgagcgtgagctgggcaccctgcagcgcgggctggag
caacacaaggcggccctggcccagctggagggcgagcgaggggcgctggaggcggtgctg
agccaggccnngagagagcgccgggcactggacaaggagnnacggcgtctgcgggcccag
acccaggcccaagaggaagccctggcagaacagggccgccgggccgcccagctggaggcc
cagagccggctgcaggcgctggagttgggcgggctgagagagagagtgcagcggctgcgg
gagctggagcaggagagcaaggggctgcgggagcagctggcagcagagcgcaaggccgca
gccgctctgcgggaggagctgctgggcgagaaggtgaaggggcaggagcgggaggctgac
ctggtgcggctgcgggagcagctggagcggagggaggaggagcagcgcctcctggaggag
cagcagggcacccagcagagccaataccagagcctggagnncaggctggagtcgtccttc
agggagatgctggctctgaaggaggagaagattggcgccctccgcagccgggtggaggaa
ctgctcaccctcaatcagcacctggggaaacagctgcgccaggtgaagagcagtcctggg
ngcccaccacctgaggctgtgggggccgtgcagcagggccaggggnaccccgagccaacg
ctggggcttcgggctgagctggagagtgacaccctgagcaagcatctcattgaggggagc
gcagcgtaaaacgcggcgctgctggcagagaaagaggctctgatggggcgactggggcag
ctggagtcgcagctgggtgccctgcagggggagctgctgagcctgcaggggcagagcnng
ggcctgcgggaggagagtgggcggctgcaggcccagtgtggggccctccaggtggagcag
gcagcgctgcgctcccagaaggcagccctagaggcccggcgtcggagcnntggggagcga
ctggcagggctggaggctgaggtgcgggcagcccggcaggagagggacgagtggcgcggg
cgccacgaagggctggtgcgcaaccatgacaagctggcactgctgcatgagcgccagggc
gctgagctggaggggctgctgggcaagcaggccggcctcaagggggccctgcgggcactg
gagcaggagcaccgagaactgcaggacaggcacagccatctggtggcacagcaggccggg
ctggagcagcgggagacagccctgcggggggagcgggagcggctggagggggctgagcgg
gaacaccggcagctgggggaacagcatgccaggctgcaggacgagcatgcacgggtgcag
gcggcgctggcagcagccgagcgagcacaggaggagcagcaaggggagctgcggggcctg
cggggccggctgacgggactgcagctggagcaggcgcggctggaggctgagggcaccgcc
ctgcgggagcagaaccaccagctggaggtggcgctgggccggatcggagaccagtgtgag
ctcctggcccagctgaaggggaaccaggaggaggagaaccgacacctgctgcaggagatc
cagaaactgagcaaggagaaccgcaccctgctggagcgcagcatggagagccgggagcag
tatcactcggagcagcgccagcacctggataagctgaacgagctgcgccgggagaaacag
aagctggtggagaagataatggaccagtaccgagtgctggagccagcacttcccaagagc
aagaagagcaactggatcgcggacatgatgaagaagctaatgaagccacggcgtgagccc
tgccgggaacagcagcgccccntggcggaggggcccaatagcattgagaacctgccggga
cttgggcaggatggacgcgcacctgatggggactccagcacccctgcttcacctgtgccc
ctgcgcaaggccagcagcatgctgagcctgcccgacacccagaggatgtacctgcggcta
aatcggcgcaagctgagctcccgtgtcctggtcagcgagtccttcgggcctggggacgcc
nacccccggcagcgcttccgccagcgccagcgcccccttgccttcctggggggctcctgc
gaggaggccgctgtctcctgggagccccaggaggggcagagactccccagtgctggcagc
gagggagaggcccggggcggcggcggcaccaggaagcgccgggcccgggccatgtaa
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