Dermochelys coriacea (leatherback sea turtle): 119858462
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Entry
119858462 CDS
T09064
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcc03036
]
119858462 (JMJD1C)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119858462 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
zf-C5HC2
C1_2
FYVE
Motif
Other DBs
NCBI-GeneID:
119858462
NCBI-ProteinID:
XP_038265006
LinkDB
All DBs
Position
7:complement(78726096..79048558)
Genome browser
AA seq
2541 aa
AA seq
DB search
MAVVETRPELVGKRFLCVGAGEEEPPERGESGRWRAGVIRAVSHRDSHSPELAVYVEFDD
LEWEKREWVKVYEDFAAFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYS
SITAVEFLVDKQLDFVTEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKVWVKEQKVQEIFM
QGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTFL
DDVVHSLLKGENIGITSRRRSRSNQNSNTAHGHYTRAQANSPRPAMNSQTATPKQNSHQH
HQQRNARPNKRKGSDSSMPDEEKMKEEKYDYIGRGENPKSKHKHFISKRRKPEEDEKKLS
MKRLRTDNISDYSESSDSENSNKRLTDSSSEQNSENELKSKNISNINGEEGKSQSSEGVE
EQTLIDRQSPWDEIQADKNHQDAERPKSAELDLQEKKSLHPAEQVKFHSQSASDAHVQEC
SVENRHTMELLTNEQFVPRPPTPKCGVDATNETNSDEKSQENAASTFGLQKLQKIVSCGS
NLKHQFTNVNFLEVRKQETDQSWVSNVVSKMDLIQSGIMKTTVNEHTNSEKEKVQHGSFV
SSLNVVSLAEEGKLHKRSPASDAMKSKSSTSVDHPKTKSNSSPDVKPKLTQSPDTVKSKV
SYQNSHVTGVLRSANKIEHDMPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLI
GQETGTNHISPYLHQHNYPLHSSSHRTCLNPNTHHPALSGAPHLLTGSSNQTPLSAINTH
SLTASHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQS
PHLLGQAHPSASYNQIGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTP
SPWLHQPTPVTSADSLGLLSHIPVRPSSADPHRPLKLTTHSSPPLSKNIVDHHKEELERK
AFIEPLRAVTTAPVKTDLEHSRTQTAKESHLHRHFVDPMLSQLQKPPQETGERLSKYKEE
HRRILQESIEVAPFTAKIKALEGERENYSRVTPLSSSSPKSYAVKHDKEPERSVSELYKI
KHSAPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSSLYVDKQNSCLSTAPNPQSLTSFIS
SLSKPPPLIKHQPEGEGSVSKITEQLSHQMTSHSVNSFRNDCRSPTQLSVSSSNTLRSMP
ALHRAPVFHPPVHQNLERKESSYSSLSPPTLTPVQPVNAGGKIQELQKPPTLVPEPKEAQ
TMYKNTSEQNLSDIWKSNNAPNNEKVEWHVERTSGKTQSATASVIVRPPSSTKYDSMPVM
QSASKDRVNERSSSTGANQTDCLKPVEARDTGRIILPNMNSDTTHTHYEKNFPSVSQGSI
PSSVTPTTTIMCSTKTDVTTSAATTTSVSSWGSSEVTYSLSNTVLACTPLECTSSKTVSQ
VVAQTQESKVSTTAPITPASGKTGSAIQPNSGFSGPTDFIHLKKHKAALAAAQFKSSNAS
ETESNTVKNQTFPASISLDSTIVCNTINKANCVGNGQASQTSQLNYHTKLKKAWLTRHSE
EDKNTNKKENSGNYVSEIIKPCTVNLIASTSSDLQNNIDSTILADKFVKEDKHTRRKAKR
TYESGSECGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKE
RSKLKLQSSSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRS
KKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDDAMSLWTHDNYEDDEVDL
ETSKYILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWV
CQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDT
MHSLREKFEIKSYCQCTSKQTMQTGKFPTMNGVSQVLQNVLNHSNKISLCMPESQQLNTP
QKSETNGNTSPGSDVSADSKLTPPESQSPLHWLADLAEQKAREEKKENKECLPGKHTKEE
RDQESSESLNCKTSPPVSQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTTGG
KGGRTMPNILDDIIASVVENKIPPNRPPKINVKSELKDGPKDGQKSILDDCSKFYSGIPH
SWICDKHILWLKDHKNSSNWKLFKECWKQGKPVLVSGVHKNMNINLWKAESISLDFGDHK
ADLLNCKDSIISNINVKEFWDGFEEVAKRQKIKGGETVVLKLKDWPSGEDFKAMMPARYE
DLLKSLPLPEYCNPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAAAKDQDIGTTNLHIEV
SDVVNILVYVGIAKGNGVLSKAGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDV
EKIREFLQKIAKEQGQEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTIIQFLGDAII
LPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKMQVKNILYHA
VKEMVRALKIHENEMEDVEEN
NT seq
7626 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtggagacgcggccggagctggtggggaagcggttcctgtgtgtcggggcc
ggcgaagaggagccgccggagcgcggggagagcgggcgctggcgcgccggggtcatccgc
gccgtgtcccaccgggattcgcacagccccgagctggcggtatatgtggaatttgatgac
cttgaatgggaaaaacgagagtgggttaaggtttatgaagattttgcagccttcttggtg
gagtaccagctggtctgggcaaaaagaaaggaccctagccagactcagggatcaaagatc
aaacaaattcaatggcctgcattgacattcaagcccttggttggaaaaagtgtgtacagt
tcaatcactgcagtagaattccttgtggacaaacaactggattttgtaactgaagatagt
gcctttcagccctatcaggacgacgtagacagtctaaacccagttctcagggacaacccg
cagcttcacgaggaagtaaaagtctgggtaaaagaacagaaggttcaggagatttttatg
caaggtccatattccttaaacggatatagagtgagagtatacagacaggattctgccacc
cagtggttcactggtataattactcatcatgatctctttacccgcactatgattgttatg
aatgaccaggtgttagaaccacagaatgttgatccttctatggttcagatgacctttcta
gatgatgttgttcactctttgttgaaaggagaaaatattggcatcacatcacgtcgcagg
tctcgttccaaccagaacagcaacacagcccacgggcattatacacgtgctcaagcaaat
agtcccagaccagccatgaattcccaaactgcaacaccaaaacagaactctcaccagcac
catcaacaacggaatgctcgtccaaataaaaggaaaggttcagatagcagcatgcctgat
gaggagaagatgaaggaagaaaaatatgattatataggtcgaggagaaaatcccaaaagt
aaacataaacattttattagtaaaagaagaaaacccgaagaggatgaaaagaaactaagt
atgaaaagattgcggacagacaatatctctgactactctgagagcagtgactcagaaaat
tcaaataaaagattaacagattcttcatcagagcaaaattcagagaatgagttgaaaagc
aagaacatttcaaacataaatggagaagaaggaaaatcccagagtagtgagggggtagag
gaacagacactaatagataggcagtctccatgggatgaaatacaagcagataaaaatcat
caagatgcagaaagaccaaagtcagctgaattagacctacaagaaaaaaaatcactccat
ccagcagaacaggtgaaatttcatagtcagagtgccagtgatgcacatgttcaagagtgc
agtgtagaaaatcggcatactatggaattgttaacaaatgagcagtttgtacccaggcct
cctacaccaaaatgtggtgttgatgcaactaatgaaaccaattctgatgagaagagccag
gaaaatgctgcaagtacctttgggttgcaaaaacttcagaaaatagtgtcctgtggcagc
aatttaaaacatcaatttacaaatgtaaattttctagaagtaagaaaacaagaaactgat
caaagttgggttagcaatgttgtcagtaaaatggatttgatacagtctgggattatgaaa
acgacagtaaatgaacatacaaattctgaaaaagaaaaagttcagcacggctcatttgtg
tcttcattaaatgtagtttcattagctgaagagggtaaactacataaacgaagtccagcc
tctgatgctatgaagtcaaaatctagtacttcagttgatcatcctaaaacaaagtcaaat
tcttcacctgatgttaagcctaaactcacccaatctcctgatactgtgaagtcaaaggtt
agttatcagaacagccatgttactggagtattaaggtcagcaaataaaattgagcatgat
atgcctaggtctagttttcatccggttccagctagagttagtgcgttagaagctactaaa
agtcctcttattattgacaagaatgaacatttcacagtatacagggatcccactcttatt
ggtcaagaaacaggaactaatcacatttcaccttacttacatcagcataattatcctctt
cattcctcatcccacagaacctgtttaaatccgaacacccatcatcctgcattaagtggt
gcaccccatctattaactgggtcttcaaatcagactccattatctgctattaacactcat
tctcttactgcatctcaccattctgttcatcaccctcatctacttcctgcagtgttacct
ggagtgcctacagcttccttattaggtggccatccacgactagagacagctcatgccagc
agcttaagccatttggcattagcacaccagcagcagcaacagatgttacagcaccaatct
ccacatcttcttggacaagctcatccttctgcttcatataatcagataggactttatcca
attatttggcagtatccaaatggaacacatgcttattcaggacttggtctaccctcctct
aaatgggtccatccagaaactcctgttaatgctgaggcttctttaagaaggaatactccc
agcccttggttacaccaacccacccctgtgacctcagctgacagtcttgggttactgagt
cacattcctgtaagaccatccagtgcagatccgcatcggccactcaaattgacaacacat
tctagtccaccgttgtccaaaaatatagtagatcatcacaaagaagaattggagaggaaa
gcatttattgaacctttacgtgctgttacaactgcacctgtaaagactgatctggaacat
agcagaacacagactgcaaaagagagtcatttgcacagacattttgtggacccaatgttg
agtcaattgcagaagccacctcaagagactggagagcgactaagcaaatataaagaagaa
catagacggatacttcaagagagtattgaagttgctccttttacagctaaaatcaaggct
cttgagggtgagagagagaattattctagagtaacgccattatcgtcttctagccccaaa
agctatgcagtgaaacatgacaaagaaccagagcgttctgtgtcagaactttataaaatc
aagcattcagcaccacagagtttgccacaaagtaactatttcaccaccttgtcaaacagt
gtagtgaacgaaccaccaagatcctacccatctaaggaagtttcaagtttgtatgtcgat
aaacagaatagttgtctttcaacagcacctaatccccagtctctcacttcttttatttca
tctctttcaaaacctccacctttgattaagcatcaaccagagggtgaaggttcagtaagc
aagataacagagcagctttcccatcaaatgacatctcactctgtaaattcttttagaaat
gactgcagaagccctactcagttatcagtttcatcttcaaatactctccgaagtatgcct
gccttacacagagcaccagtgtttcaccctccagttcatcaaaacctggagagaaaagaa
agcagctatagcagcctttcacctccaaccctaacaccagtgcagccagttaatgctggt
ggcaaaattcaagaattacaaaaaccaccaactttagtacctgaacctaaggaagcgcaa
acaatgtacaaaaacacttctgagcagaatttatcagatatttggaaatctaataatgcc
ccgaacaatgaaaaagttgaatggcatgttgagcgaaccagtggaaaaacgcaatctgcc
acagcatctgtcattgtacgtccaccttctagtacaaaatatgatagtatgccagtaatg
cagtcagcttccaaagatcgagttaatgaaagatcttcttcaactggggcaaatcaaaca
gattgcctaaaaccagtggaagccagagacactggaagaataattctgccaaatatgaac
tcagacactacacacacacattatgaaaagaactttccatctgtctcacaaggcagcatt
cccagttctgtcacacctaccacaactataatgtgcagtaccaaaacagatgtaaccaca
tctgcagccacaactaccagtgtttcaagctggggtagttcagaagtgacttattcttta
tcaaacacagttttggcctgcacaccattggaatgtacctcctctaaaacagtaagtcag
gtagtggcacagacacaagaaagtaaggtcagtaccacagctccaattacaccagccagt
ggcaagacaggaagtgccattcagcccaactctggattttctggcccaactgattttatc
catttgaaaaagcacaaggcagcattggctgcagctcaatttaaaagtagtaatgccagt
gagactgagtccaatactgtgaaaaatcagacatttccagcctccatttccctagacagt
actatcgtctgcaatacaataaacaaagccaactgtgtaggcaatgggcaagcttcccag
acaagtcagctgaactaccacacaaaactgaaaaaggcttggcttactagacattcagaa
gaagataaaaacactaataaaaaagagaattcagggaattatgtatcagaaattattaaa
ccatgtactgtcaatttaatagcttctacatctagtgatttacaaaataacatagacagt
acaatcctagcagataaatttgtgaaagaagataaacacacaagaagaaaagcaaaaagg
acttacgaatctggctctgaatgtggagactctgatgaaagtgagagcaagtcagagcaa
aggactaaacggcagcctaagccaacttacaaaaagaaacaaaatgatttgcaaaagaaa
aagggtgatacagaggaagaagtaaaacccaatggtgttcttagcaggagtgccaaagaa
agaagcaagttgaagttacagagcagcagtaacagcactggaatacctcgttcagtatta
aaagattggcgcaaagtaaagaagctgaagcaaaccggagaatcctttctgcaagatgac
tcttgctctgaaatagggcctaatctgcagaaatgcagagaatgtagactcattagaagt
aagaaaggtgaagaaccaactcactcaccagtattttgtagattttattactttcgtcgg
ttgtcttttagtaagaatggagtggttaggatagatggtttctcttctcctgaccaatat
gatgatgatgcaatgagtttgtggacacatgacaattatgaagatgatgaagtggatcta
gagacttctaaatacattttagacatcataggtgataaattttgtcagctagtaacatct
gagaaaacagccatgtcctgggtgaagaaagatgccaaaattgcctggaagagagcagtg
agaggagtccgtgagatgtgcgatgcatgtgaagccacactgtttaacattcattgggtc
tgccaaaaatgtgggtttgtggtctgcttagattgttataaagcaaaggaaaggaagagt
tctagagataaagaattatatgcttggatgaaatgtgtgaaaggacagcctcatgatcac
aagcatttgatgccaactcagattattccaggctctgttctgacagatcttctagatacc
atgcacagtcttagagagaaatttgagattaaatcctattgtcagtgtaccagcaaacag
accatgcaaactgggaaattccctacaatgaacggtgtctctcaggttttacagaatgtc
cttaatcacagtaataaaatttctctgtgcatgcctgagtctcagcagctgaatacccct
caaaagtctgagacaaatggcaatacaagtccggggagtgatgtaagcgcagacagcaag
ttaactccaccagaatcccagtctccgctgcattggttagctgatctagcagagcaaaaa
gccagagaggaaaagaaagaaaataaagaatgtcttcctggaaaacatactaaagaagag
agagaccaagagagttcagagtctctaaattgtaaaacatctcctcctgtgtcccagaac
aacgaacagggctcaaccttacgagacctactgactacaacagctggcaaactgcgtctg
ggctctacagatgctggcattgcttttgctccagtttactctacaggaacaacaggtggc
aaaggtggaaggactatgccaaacattcttgatgacataattgcttcagttgtagaaaac
aagattccaccaaatagaccaccaaagataaatgtaaaatctgaactgaaggatgggcca
aaagatggtcaaaaatctattctggatgattgcagtaaattctacagcggtattccacat
tcatggatctgtgataagcatattttgtggctcaaagatcataaaaacagcagcaactgg
aagctctttaaagagtgctggaaacaaggaaagcctgtattagtgtctggagtgcacaag
aatatgaacatcaacttgtggaaggcagagtcaattagcctagattttggagaccacaaa
gctgatctcctaaactgcaaagacagcattatttcaaacatcaatgtcaaggaattctgg
gatggttttgaagaagttgcaaaacgacaaaaaataaaaggtggggaaacggttgtacta
aaactgaaagactggccctctggtgaagacttcaaggctatgatgcctgcaagatatgaa
gacttattaaaaagtttaccattgccagaatattgtaacccagaaggaaaattgaattta
gcttcccatttaccagggttttttgtacgtccagatttgggacccagattatgcagtgcg
tacggtgtggctgctgctaaagatcaagatataggaactacaaatctccatattgaagtt
tctgatgtagtgaacatccttgtctatgtgggcatagcaaaaggaaatggagtactctca
aaagcaggagtattaaagaagtttgaagaagaagatttggatgaccttttaaggaaaaga
ttgaaagactcaagtgaattacctggggctttgtggcacatttatgctggcaaagatgtt
gaaaagataagagaatttctgcaaaagattgcaaaagaacagggtcaggaagttttacca
gagcatgatccaatacgtgaccagagttggtatgtgaacaaaaaacttcgccaaagactt
cttgaagaatatggagtaaaaacctgcactattattcagttccttggtgatgctattatt
ttaccagcaggagcccttcatcaggtgcaaaattttcacagctgcattcaagtaactgaa
gactttgtgtctccagaacatcttgtacagtcatttcacttaacacaggaactgaggctg
tcaaaagaagaaatcaattatgatgataaaatgcaggttaaaaatatcttgtatcatgca
gttaaggaaatggtgagggctttgaagattcatgaaaatgaaatggaagatgtggaagaa
aactaa
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integrated database retrieval system
