Dermochelys coriacea (leatherback sea turtle): 119858597
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Entry
119858597 CDS
T09064
Symbol
PBRM1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119858597 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcc03021
]
119858597 (PBRM1)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119858597 (PBRM1)
Transcription machinery [BR:
dcc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119858597 (PBRM1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
119858597 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119858597
NCBI-ProteinID:
XP_038265511
LinkDB
All DBs
Position
7:43502968..43585171
Genome browser
AA seq
1711 aa
AA seq
DB search
MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSISGGDFDDGHHSTNVPGPSRKRRRLSNL
PTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKL
KMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYMRTKNEFVQKGDAEEEE
EEDEGHDNQGAISEVSSPSYLKEILEQLLEAVAIATNPSGRLISELFQKLPSKVQYPDYY
AIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFN
MKKAEIEHNELAKSSLRIRTPSNLAASKLTGPSSQGKGSVGDERNSTNKYYRNKRSVQGD
RLSAITMALQYGSESDEDAALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRNCRNN
QGQLYQNPFXHLPSKKKYPDYYQQIKMPVSLKQIRTKLKNHEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIK
KQRMKILYNVVLETREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRSDK
YSGEEAMIEDMRLMFRNARHYNEEGSQVYNDAHILEKILKEKKKELGPLPEDDDIASPKL
KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVT
IKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET
KRDIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPP
LTFDIIRKNVENNRYRRLDLFQEQMFEMLERARRMNRTDSEIYEDAVELQQFFIKIRDEL
CKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEFEEDKLKREEEKREAEKSEDSAGGAG
LSSLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFY
RPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVC
ESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANTDKVEDEKHTETLEDN
KMGDSILNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGR
IEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSF
KDFLSCRPTEISENDVLLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQ
KEPSPLLEKKIQQLEAKFAELEGGDEDIEEMAEEEGEIIEAPSMPQLQTPLSSELDIMPY
TPPQSTPKSAKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWR
NLEATKKAEYEERAAKVAEQQERERAAQQQQQNSSPRAGTPVGALMGVVPPPTPMGMLNQ
QLTPVAGMIGGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGV
IGQSVSSMVGTPAPGGSPFGQPMGMLGPPGQQAPPPYPGQSQASQQVIQQPTTPMFVSPP
PKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLSARRRDVHLSKEQESRLPSHWLKSKGA
HTTMADALWRLRDLMLRDTLNIRQAYNIENV
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggtgctggttgtactctgaagaagttggattccatgggt
tccaagagacgaagggctacttctccttccagcagcatcagtggaggagattttgatgat
ggtcaccattcaacaaatgtaccaggcccaagcaggaaaaggaggagactttcaaatctc
ccaactgtagatcctattgctgtgtgccatgaactgtacaacacaatcagagattacaaa
gatgaacagggcaggctcttatgtgagcttttcattagggcaccaaaacgaagaaatcag
ccagactactatgaagtggtttctcagcctattgatttaatgaaaatccaacagaaacta
aaaatggaggagtatgatgatgtgaacctactgactgctgactttcagctactatttaac
aatgcaaaggcttactataagccagattctcctgaatataaagcagcctgcaaactgtgg
gatttgtatatgcgcacaaagaatgagtttgttcagaaaggtgatgctgaggaggaggag
gaagaggatgaagggcatgacaatcaaggggcaatatctgaagtatcttctccaagctac
ttgaaagagattcttgaacagctgcttgaagctgtagccatagccaccaacccatcagga
cgtctcataagtgagctgtttcagaagcttccctctaaagtgcaatatcctgactattat
gcaataattaaagagcccatagatcttaagactattgcccagaggatacagaatggaagt
tataaaagcattcatgcaatggccaaggatatagatcttttagcaaagaatgccaaaacc
tataatgagcctggatctcaagtattcaaggatgcaaatgctattaaaaaaatatttaat
atgaaaaaggctgaaattgaacataatgaactggccaagtcaagtcttcgaatcaggact
ccatcaaatttggctgcttccaaactgacaggtccttcctcacagggtaaaggcagtgtt
ggtgacgagagaaattctactaacaaatattaccgtaacaaaagatcagtccaaggggat
cgtttgtctgcaataaccatggcattgcaatatggatcagaaagtgatgaggatgctgct
ttggctgctgctgcccgttatgaagaaggagagtctgaagcagagagcatcacttccttt
atggatacttctaaccctctttatcagctttatgatacggttagaaactgccgaaataac
cagggtcagctatatcagaacccttttnntcatttgccttccaagaaaaaatatccagat
tattatcagcaaatcaaaatgcctgtttcattgaagcaaatcagaaccaaactgaagaac
catgaatatgaaactctagaccacttggagtgtgatctgaacttaatgtttgaaaatgcc
aaacgctacaatgttcctaattcagccatctataagagagtactgaaaatgcagcaagtt
atgcaggcaaagaagaaagagctagctaggagagacgacattgaggacggagacagtatg
atctcttctgccacatctgatactggaagttcaaaaaggaaaagtaaaaagaatataaag
aagcagcgaatgaaaatcttatataatgttgttcttgaaactcgagagcctggtacaggc
agaagactgtgtgatctatttatggttaaaccctccaaaaaggactatccagattattat
aaaatcatcttggagccaatggatttaaaaattattgagcataacatccgtagtgataaa
tactcaggggaggaagctatgatagaagatatgaggctaatgttccgaaatgcaaggcac
tataatgaggaaggctcacaggtatataatgatgcccatatcctagagaagattcttaaa
gaaaaaaagaaagagctgggacctcttcctgaagatgatgatatcgcttcccctaaacta
aagctaagtagaaaaagtggtatttcccctaagaaatcaaaatacatgactccaatgcaa
cagaaactgaatgaggtgtacgaagcagtgaagaactatacagataaacgaggcagacga
ttaagtgccatcttcctgaggcttccatctcgatcagaactgcctgactattacgtaacc
attaaaaagccagttgacatggaaaagataagaagtcacatgatggccaacaagtaccag
gacatcgattccatggtagaagactttgtaatgatgttcaataatgcctgcacttataat
gagccagagtctctgatttacaaagatgcccttgtcttacataaagttttgcttgaaact
aaaagagacatagaaggagatgaggattctcatgtccccaatgtaacattgctaatccag
gaacttatccataacctttttgtgtccgtaatgagccatcaggatgatgagggcaggtgt
tatagtgactccttagctgaaattcctgctgttgatcccaacttcccaaacaaaccacct
ttgacttttgatattatccgaaagaatgtagaaaataatcgctacaggagactggacttg
tttcaagagcagatgtttgaaatgctagagagggcaaggaggatgaaccggactgattca
gaaatttatgaggatgctgtggaacttcagcagttctttattaaaatccgtgatgaactc
tgcaagaatggagagattcttctatcaccagcactcagctacaccaccaagcatcttcac
aacgatgtagaaaaagaaaaaaaggaaaagctacccaaagaattcgaagaggataaactc
aaaagagaggaagagaagagagaagctgaaaagagtgaagattctgctggaggagctggt
ctgtcaagcttacatcggacttacagccaggattgcagctttaaaaacagcatgtaccat
gttggggattatgtctatgtggaacctgcagaagccaacctgcaacctcatatagtctgc
attgagcgattatgggaagattcagctggagaaaaatggttgtatggctgctggttttat
cgaccaaatgaaacattccatcttgcaacacgaaaatttctggagaaggaagtttttaag
agtgattactataataaagttcccgttagcaaaattttaggcaaatgtgtggtaatgttt
gttaaggagtattttaaattatgtcccgaaaactttagagatgaggacgtctacgtctgc
gagtctcgttactctgcaaagacaaagtcttttaagaagattaaactgtggaccatgccc
attagctctgtaaggtttgtccctcgagatgtgcccctgcctgtggtccgtgtcgcttct
gtgtttgctaatacagacaaagtggaagatgagaaacacactgaaaccttagaggataat
aaaatgggagacagtatccttaacctcgaaaaggagaaagaagatgttccagtggaaatg
tcaaatggagaacctggttgccactactttgaacagctccgttataatgatatgtggctt
aaggttggggattgcgtatttataaaatcacatggcttagtgcgacctcgggtgggcaga
attgagaagatgtgggtacgggatggagctgcgtatttctttggcccaattttcatacac
ccagaagaaactgaacatgagccaactaaaatgttctacaagaaggaagtatttttgagt
aacctagaagagacctgtccaatgacctgcattctggggaaatgtgctgtgttatcattc
aaggacttcctgtcttgtagaccaacagagatctctgaaaatgatgttctactctgtgag
agccgttacaatgaaagtgacaaacagatgaaaaaatttaaagggcttaagaggttttca
ctctctgcaaaagtagtggatgatgaaatttactactttagaaaacccatagttcctcag
aaggagccatctccactactggagaaaaagattcagcaactagaagcaaaatttgcagaa
ttggaagggggtgacgaggatattgaagagatggcagaagaagaaggtgaaatcatcgaa
gcaccttctatgcctcagcttcagactccactgtctagtgaactggatataatgccatac
actccaccacagtccaccccaaagtctgccaagggcagcacgaagaaggagggatcaaaa
aggaagatcaacatgagtgggtatatcctgtttagcagtgagatgagagctgtgattaaa
gctcagcacccagactactcctttggagagctcagcaggcttgtaggaactgaatggaga
aacttggaagcaactaagaaagcagaatatgaagagcgggcagctaaagttgctgagcag
caggagagagagcgagcagcacagcaacagcagcagaattcctccccccgggcaggcact
cctgtcggggctcttatgggggtggtgccgccaccaacaccaatgggaatgctcaatcag
cagttgacacctgttgcaggcatgataggtggctatccgccagtgctgccacctttgcag
ggcccagttgatggcattgttagcatgggcagcatgcagccacttcaccctggggtgccc
ccaccccaccaacttccgccaggtatgccaggcatcccaggcatcccaccaccgggtgtt
atcggccaaagcgtgtcttccatggtaggcactccggcaccaggaggaagtccctttgga
cagccgatgggaatgcttgggccacctggccagcaggcaccacctccataccctggtcaa
agccaagcaagtcagcaggttatacagcagcccacaactccaatgtttgtctcccctcca
ccaaagacacagcggcttcttcattctgaggcctacctgaaatatattgaaggacttagt
gctgaatcaaatagtattagcaagtgggaccagaccctttcagcacgaagacgtgatgtc
catctatccaaagaacaagagagccgtcttccttcacactggttgaaaagtaaaggggcc
cataccacaatggcagatgcactgtggcgtcttcgagacttgatgctacgagacaccctc
aatatccgtcaagcatacaacatagaaaatgtttaa
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integrated database retrieval system
