Dermochelys coriacea (leatherback sea turtle): 119858645
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Entry
119858645 CDS
T09064
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119858645 (ZSWIM8)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
119858645 (ZSWIM8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
119858645
NCBI-ProteinID:
XP_038265661
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All DBs
Position
7:54316332..54443805
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AA seq
1820 aa
AA seq
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MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCTQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAVQQRNCRLQCVETTCEAGRGHGQEPGGTCLQPGDRSRPS
SQEPAVRPKELIGKRKVVTEAPQRALRRLSAEGDKVVYKTAVGKAKLPVGKSLASKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPVNRSYRDTFEDDGGVYFSEG
PEPSVRSNPAAKKAPKDPVEEVGSGDDDLPSADENGASRKPEVGENGAAGGGEEGEEEDD
YQVYYLNPQEVAKEEEDKAEGGNEEEQDIFAGIKPLEQENRMEILFACAEALYAHGYSNE
ACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLSERL
EYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIVALLKKIPLGTNEMNTIRGRAEE
LREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAAVAA
LGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQT
LSSFYSSSKPTVANQKSPSKHAAQSTTAIQQLPGTSVTQQAGVTTAVQSSPSESFVEKSA
QESSQRSPCEPPGESSVVKQEGKVPSRLALGSRGGYNGRCWGSPVRQKKKHTGMASIDSS
APETTSDSSPTLSRRPLRGGWAATSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARA
KTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGG
HQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVEC
WDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDN
LMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSVSGARAA
SEAVRGLTDSRVAAEPTTVTVAAAVTAAATVVPVISVGSTIYQQHTMAGPAMAHAHTQGL
HPYTTLQTHIPCNPQYIGHPIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTTPSLA
ATAVSFPGVPVPSMTQIAVHPYHAETGLSLSSNVAIGSVHAGSTFPAIPGASLTALSSQP
NSLVTGGFPSEDEQHSQPVSPQGLQYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYT
EDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTPAF
HQLVQRCQQAYMQYIHHRSIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKR
SKQTKELWQRVSLEMTTFSP
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcggagtgggaggacggggaaaggttttcatttgaagactctgac
cgctttgaggaagactccctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggaggaagcaatcagctggacccaattcccctactgtcaaaatgaaagat
ggtttggtgattccactggtggaactgtctgcgaagcaggttgcgtttcacattccattc
gaggtagtggagaaagtctacccccccgtacctgaacagctgcagcttcggatcgccttc
tggagcttcccagagaacgaggaggacatcaggttgtactcctgcttggcgaatggcagt
gcggatgagttccagcgtggggagcagctgttccggatgcgggctgtcaaagaccctctg
cagataggtttccacctgagtgccacagtggtacctccgcagatggtgccaccaaaaggt
gcatacaacgtggccgtgatgtttgaccgatgcaggatcacctcgtgcagctgtacctgt
ggagctggagccaagtggtgtgcccatgtcgtggccctctgtctcttccggatacacaat
gcatctgcagtatgcttgcgagcacctgtttcagagtccttgtctcggctgcagagagat
cagctacagaaatttgctcagtacctgatcagtgaactcccacaacagattcttcctact
gctcagcgcctactggatgagctgctatcttctcagtccactgccatcaacacagtgtgt
ggagccccagatcccactgctggtccctcagcctcagaccaaagcacctggtacctggat
gaatctactttaagtgacaacataaagaaaacccttcacaaattctgtgggccctctcct
gttgtcttcagtgatgtgaactctatgtacctctcctccacggagccaccagccgctgcc
gagtgggcatgtctcctgcgtcccctgagagggagagagcctgaggggatctggaacctg
ctctctattgttcgggagatgttcaagagaagggacagcaatgcagcccctctgctggag
atcctgactgaccagtgtttgacctatgagcagataacgggttggtggtacagtgtgcga
acatctgcgtcccacagcagtgctagcgggcacactggccgcagtaatggtcagtcagaa
gtggctgctcatgcctgtgccagcatgtgtgatgagatggtggttctctggaggctggct
gtcctagacccaaccatcagcccgcagaggcgcagggacctttgcacccagctcagacag
tggcagctgaaagtcatagataatgtcaagagggggcagcacaagaaatccctagagaag
ctcttccaaggtttcaagccagctgtggaagcctgttacttcaactgggaggaggcctat
cccatccctggtatcacctatagcagcactgataagaagaattcgttctgttgggtaaag
gccgtccaacagaggaactgtcggttgcagtgtgtggaaaccacgtgtgaggctggcaga
ggccatgggcaggaacctgggggaacctgtctgcagccaggggacaggtcacgcccctct
tcgcaagagccagctgtccgtcctaaggaactcattgggaagcggaaagttgtcactgaa
gccccccagagggctctgcgccgactttcagcggaaggagataaggtggtttataagaca
gcagtaggcaaggccaagctgccagtggggaaaagcttagccagtaaacatagtgggaaa
cgccgcatgagcagtgaagacagctctctggaaccagacttggcagagatgagcctggat
gacagcagcttggctctgggggcggaggccagtaacaccttcagtttcacggagagcccc
gtgaataggagctacagggacacctttgaagatgacgggggggtgtacttctcggagggt
cctgagcccagcgtccggagcaatcctgctgccaagaaagctccaaaagatcccgtggaa
gaagtgggcagcggagacgatgatctgccttctgcagatgagaacggtgcaagccggaag
ccagaagtgggagagaatggtgcagcagggggcggggaggagggagaagaggaagatgat
taccaggtatactatctgaatccacaggaggtggccaaggaggaggaggacaaagcagag
ggggggaatgaagaggagcaggacatctttgctggtataaagcccttggagcaggagaac
aggatggagatcctctttgcctgtgcagaggctctctatgcacatggatacagtaatgaa
gcatgccgtctgactgtagaactggccagggacctactggccaaccctccagatctcaag
gtggagcagcccccaaccaaggggaagaagaacaaggtgtcaaccagcaagcagacgtgg
atggcaaccaacaccctgtccaaagctgctttcctgctgactgtgctgagtgagaggctg
gaataccacaacctggccttccgcattggcatgttcgccctggagctacagaggcctcct
gcctctaccaaggccctggaggttaagctggcataccaggaatctgagattgtggccttg
ttaaagaagatccctttgggcactaatgagatgaacaccattcgaggaagggctgaagag
ctgagagaaggaaccttgtgtgattaccgccctgtcctgcctctcatgctagctagcttc
atatttgatgtcctatgtactccagtggtttctccgacagggtccaggcccccaagccgt
aattggaataatgaaatgcctggagatgaggagcttggttttgaggcagctgttgctgct
cttggcatgaagacgactgtgagtgaagcagagcaccctcttctctgcgagggaacgcga
agagagaagggtgatctggctctagctctgatgatcacatacaaagatgaccagtctaaa
ctgaaaaagattttagacaaactgctagacagagagagccaaacgcacaagccacagact
ctgagttccttctactcatccagcaagcccacagtagccaatcagaaatctccttccaaa
catgctgcccaatccaccactgctatccagcagcttccagggacatcagtcactcagcaa
gcaggtgtaaccactgcagtccagagcagtccttctgaaagctttgtggagaagagtgca
caggagagctctcagaggtctccttgcgagccgcctggggagtccagtgtcgtgaaacag
gaggggaaggttcccagtcgtctggcccttggaagtcgaggtggatacaatgggagatgc
tggggctcacctgtcaggcagaagaagaaacacacaggcatggccagtattgacagcagt
gctcccgaaaccacctctgacagcagtccaaccctcagtcggcggccacttcgtggggga
tgggcagccacctcctggggcagaggacaggacagtgacagcatcagcagctcgtccagt
gactcactgggctcatcgtcctcgagtggcagcaggagagccagtggtggagcacgtgca
aagactgtggaagttggcaggtataaagggaggcggccagaaagccatgcacctcatgtc
ccaaaccaaccctcagaagcagctgctcacttctactttgaactggccaagacagttctt
atcaaggcaggtggaaacagcagtacctccatcttcactcatccctcctccagtggtggg
caccagggtccccaccgcaacctccatctctgcgcctttgagattgggctctatgcacta
gggctgcacaactttgtctcccccaactggctctctcgaacctactcctcccacgtctct
tggatcacagggcaggccatggagattggcagcgcagccttgaacattctggtggagtgt
tgggatggacacttgactcctccggaagtggcatcattggcagatagggcttcaagggcc
agggactccaacatggtgcgagcagctgctgaactggcactcagctgcctgccccatgcc
catgccctgaacccaaatgagatccagagggccctggtgcagtgcaaggagcaggataac
ctgatgctggagaaggcctgcatggctgtggaagaggcagccaaaggaggtggggtgtac
ccagaagtcctgtttgaagtggcacaccagtggtactggctctatgaacagactgttggt
gggaccccggcgcagagagaaggagccactggttgcagcgtcagtggtgcccgggcagcc
tctgaagcagtgcgcggattgacagacagcagggtggctgctgaacccactactgtgaca
gtggcagctgcagtgacagcagcagcgacagtagtgccggtgatctctgtggggtcaact
atctatcagcagcatacgatggccgggccagcaatggcacatgcacacacccagggcttg
cacccctacactactctccagacccatataccctgtaacccccaatatattggacaccca
atccagcacatgccacgcccagcagtcttccctgtgcctggctcagcgtacccccagggt
gtccacccagcattcataggagcacagtatccctattctgtaacaactccatctctggca
gctacagcagtgtcattccccggggtgcccgtcccatccatgacacagattgcagtgcac
ccgtaccatgctgagacaggactgtcactgtcttccaacgtagcaatagggagtgtccat
gcgggatcgacattcccagcaattccgggagcttccttgacggctctttcctcgcagccc
aactccctcgttacagggggctttccttcagaggatgaacagcacagtcaacctgtgagc
ccccagggtctgcagtacctccactctgcctaccgagttgggatgctggcactggaaatg
cttggccggagagctcacaacgaccatccaaacaacttctcccgcagcccaccctacaca
gaagatgtgaaatggcttctggggttagctgccaagctaggtgtaaactatgtacatcag
ttctgcgttggcgcagccaagggcgtgctgagccctttcgtgctgcaggagatcatcatg
gaagcactgcaaaggctcaaccctgcccatgtccacaaccacctgcgcactccagccttc
catcagctggtgcagcggtgccagcaggcatacatgcagtacatccaccaccggtcgatc
cacctcaccccagctgactacgatgactttgtgaacgccatccgcagtgccagaagcgcc
ttctgcttgactcccatgggcatgatgcagttcaatgatatcctccagaacctaaagcgc
agcaaacagaccaaggagctgtggcaaagggtctctctggaaatgaccaccttctccccg
tga
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integrated database retrieval system
