Dermochelys coriacea (leatherback sea turtle): 119858706
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Entry
119858706 CDS
T09064
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcc04131
]
119858706 (PPFIBP1)
Membrane trafficking [BR:
dcc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119858706 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119858706
NCBI-ProteinID:
XP_038265900
LinkDB
All DBs
Position
1:complement(230808629..230986821)
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AA seq
1038 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMEADEKEGLRCQVPDSTAEALIEWLQSQMTNGHISGNGDVYQERLGRLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLNLMAEISNLK
LKLTAVEKDRLDYEDRYGDTESLMQEINELRLRVGEMDNERLQYEKKLKSTKSLMAKLSS
MKIKVGQMQYEKQRMEQKCQILKDELASLKEKLEQKETEVRKLQEKLVCKMKGEGVEITD
RDENCKKKLKDKNIEVQKMKKAVESLMAANEEKDRKIEELRQSLNRYKKVQDMVVMAQGK
KGKEGECEEFLNSGSVSAVLLDMQSLTEQEKSPSPVPIISSPSHEEFNTTVPEENSLQIH
TSILQVSIPAFPPAPKSSEAATEKVKAQPKPEVVSEVSEGTTPCSSVETQPCDSPLVSPL
QKSSSLGNLKKEASEVDKEPVQKPAETKAPMEANKCGTLPPKSPSHSGTGDEDSFGTRKA
RSSFGRGFFKIKNNKRTASAPNLDRSRSASAPTLAETEKGSADHLDLAGLPPRPKETDSG
QMSPSSPDSKKKARGIKKLFGRLKRSQSTTFNPDDMSEAEFKRGGTRATAGPRLGWSRDL
GQSNSDLDMPFAKWTKEQVCNWLQGQGLGSYLNHGKHWILSGQTLLQASQQDLEKELGIK
HPLHRKKLQLALQALGSEEENNHGKLDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYM
SVDDLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENNITPSEVTQWTNHRVM
EWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPNKTLLRRHLATHFNLL
VGQDAQHQKREAMESPDYVLLTATAKVKPKKLAFSNFGSLRKKKQDDVEEYVCPMELGQA
SGSGSKKGFKAGLDIRVYDDDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDEMFK
DFAICSPSASITDEDSNV
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgacgcaagtgacatgctggctgcagctttggaacagatggatggcattata
gcaggttccaaggctttggagtattccaatggtatatttgattgtcagtcccctacctct
ccattcatggggagcctgcgagcactgcaccttgtggaggatttgcgtggtttattagag
atgatggaagcagatgaaaaagaaggactgcgatgtcaggttccagattccacagcagaa
gctttgattgaatggctccaaagccaaatgactaatggacatatatctggtaatggagat
gtatatcaagaaaggctagggcgtctggaaaatgataaggaatctcttgttctgcaagta
agtgtccttactgaccaggtggaagcacaaggagaaaagattcgagatttagaattctgt
ctagaggagcacagggagaagctgaatgccacagaagagatgctgcagcaggaacttctg
agtagaacatcccttgaaactcagaaattgaaccttatggcagaaatttccaatctgaaa
ctaaagctaaccgctgtagagaaggaccgattagactacgaagacagatacggagacaca
gagagtttgatgcaggaaatcaatgaattacggttaagagtgggagagatggataatgag
agacttcagtacgagaagaagcttaaatccaccaaatctttaatggccaaactttctagc
atgaaaatcaaagtgggtcagatgcagtatgaaaagcagcggatggagcaaaaatgccag
atattaaaggatgaactggcatctttgaaagagaaattggaacagaaggaaacagaagta
agaaagttacaagaaaaattggtttgcaagatgaaaggagaaggagttgaaataactgac
agagatgaaaattgtaaaaagaagctcaaagacaaaaatatagaggtacagaaaatgaag
aaggctgtggagtctctaatggcagcgaatgaagaaaaggatcgaaagatagaagagctg
cgacaatccctgaatcggtataagaaagtgcaagacatggtggtaatggctcagggaaaa
aaaggcaaagaaggcgaatgtgaagaatttttaaattcaggatctgtttcagcggtttta
ttggacatgcagagtttaactgagcaagagaaaagcccatctcctgtcccaataatcagc
tctccgagccatgaagagtttaacaccactgttcccgaagagaattcattacaaattcac
accagcatcttgcaagtttcaatccctgcttttccaccagcacccaaaagctcagaagca
gctacagaaaaagtgaaagcacagcctaaaccagaagttgtgagtgaagtgagtgaaggg
acaacaccatgttcctccgtagaaacacagccatgtgacagtccattagtgtcacccctg
caaaaatccagcagtctgggcaatttgaagaaagaagcatcagaagtggacaaagaacct
gtacagaaaccagcagagactaaagctcccatggaagctaacaagtgtggaaccctccct
ccaaaatccccaagccatagtggtaccggagatgaggacagttttggtacccggaaagcc
agatcttcatttggacgaggctttttcaagataaaaaataacaagaggacagcaagtgca
cctaatttggatcgcagtcgaagtgcaagtgcacctactttagctgaaacagaaaaggga
tctgcagatcacttggacctagctggtttgccccctcgaccgaaagaaactgatagtggg
cagatgtctccctcttctccagactccaagaagaaagccagaggaatcaagaaattattt
ggaaggcttaaaaggagccagtctaccacatttaacccggatgatatgtctgaggcagaa
ttcaaaagaggagggacaagagcgactgcaggaccaagactgggctggtctcgagatctt
gggcagtctaacagtgacctggatatgccatttgctaaatggacaaaggagcaagtttgc
aactggctccagggccagggtttaggttcatacttgaatcatggcaaacactggatactg
tctgggcagactctcttgcaagcttctcagcaggatctggaaaaggaacttggaataaag
catccactgcatcggaagaaacttcagctcgctcttcaggcgctggggtcggaagaagaa
aacaatcatggaaaactggattacaactgggttaccaggtggttggatgatattggactt
ccccagtataagactcaatttgatgaaggaagggtggatggtcgaatgctccattacatg
agtgttgatgacttgctgtccttgaaagttgttagtgtccttcaccatcttagcattaaa
agagccattcaggtcctgagaataaataactttgaacccaactgtctgcgcaggaggcca
tctgatgagaacaatatcaccccatcagaggttactcagtggaccaatcaccgtgtaatg
gagtggttacgctcagttgacctagcagaatatgcacctaatttgagagggagtggtgtg
catggtggacttatggtcttggaacctcgttttaatgtggaaaccatggcacagttgctg
aacatcccaccaaacaagacgctgctgagacgccatttggcaacccatttcaatttactg
gttggtcaggatgcccaacatcaaaagcgtgaagccatggaatctccagactatgtcctt
ttaactgctactgccaaagtgaagccaaagaagcttgccttcagcaattttggaagtctg
aggaagaagaagcaggatgatgtggaagagtatgtgtgcccgatggaactgggacaggca
tctggaagtgggtctaagaaaggatttaaggctggcttggatatccgagtgtatgacgat
gacgatttggatagactggagcagatggaagattcagaagggacagtgaggcaaatagga
gcattctctgaaggcatcaacaacttgacacacatgttaaaagaagacgaaatgtttaaa
gactttgctatttgctctcctagcgccagtataacagatgaagattcaaatgtgtga
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