Dermochelys coriacea (leatherback sea turtle): 119858836
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Entry
119858836 CDS
T09064
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X4
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04010
MAPK signaling pathway
dcc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119858836 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119858836 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcc03000
]
119858836 (NFKB2)
Transcription factors [BR:
dcc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
119858836 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
119858836
NCBI-ProteinID:
XP_038266226
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All DBs
Position
7:complement(56083449..56112668)
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AA seq
928 aa
AA seq
DB search
MDEPYNACLDGIDYDDFQFSSHMMEQKEPLMETAEGPYLIIIEQPKQRGFRFRYGCEGPS
HGGLPGASSEKGRKTYPTVKICNYGGVARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCI
VTVGPKDMTAQFNNLGVLHVTKKNMMEIMKDKLKQQKIRNRNQALTESELREIEVEAKEL
KKVMDLSIVRLRFTAYLRDSNGNFTLPLNPVISDPIHDSKSPGASNLKISRMDKTAGSVR
GGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDR
PVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGAGG
GSGGFGSGGGGNLNYPYSSGLTYNNIYSSGPHPVGGYQGGVQMTRATKMEEEGDGEHLPV
ETGKQPCPPEESHRQQLHHHAQLCSMRMLALAQRSAHALLDYSVTADPRMLLAVQRHLAA
SQDENGDTPLHLAIIHEQTTVIEQLIQVILSIPNQQIINVANHLQQTPLHLAVITKQHQV
VRLLLQAQADPTLLDRYGNSLLHLALQTGDEAMLKTLLGHLDSSGPCLLSTPNYHGLLPV
HLAVRVKSLACLDLLVRMGADVNAVERQGGRTPLHLAVEMENLNVAGHLVKKLGADVNAR
TFAGNTPLHLAAGLGSPILTKMLIKAGGDVLCENDEPVRSSSSEASSDTDSGPEEQEADM
ELGESDTEHTDTSTATEHRSREPGTRGARQRRRHTPLDLTRSHKVREILLRASLQGPESE
QPAAPRPGTILSLDSNTLQGLEQLLNQDRSGSDWTELAQRLGLRSLVETYKDTASPSGSL
LLSYELAGGSLGGLLEALDSMGLSEGVRMLRKAETADKLQSTELKEDSAYGSQSVEEEQP
PAPPLKLHPLPSAELLGEPPHSQQQQVH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccctacaacgcgtgcctggatgggatcgactatgacgacttccagttcagc
tcccacatgatggagcagaaggagccgctgatggagacggctgaaggtccatatctcatc
atcattgagcagcccaaacagcgcgggttccggttccggtacggctgtgaaggcccctca
catggtgggctgcccggagcatccagtgagaagggacgcaagacttaccccactgtcaag
atctgcaactacggaggcgtggcacggatcgaggtggacttggtgacccacagtgaccct
ccacgagtgcacgctcacagcctggtggggaagcagtgcaatgaggctggcaattgcatc
gtgaccgtgggacctaaggacatgacggcacaattcaacaaccttggggtgctccacgtg
accaagaagaacatgatggagatcatgaaggacaagctgaagcagcagaagatacgcaat
agaaatcaggcactgacagagtctgagctgcgtgagattgaggtggaggcgaaggagctg
aagaaggtgatggacctgagcatcgtgcgcctccgtttcactgcctacctccgtgacagc
aatgggaacttcacactgcccctcaaccctgtcatctcggacccgatccatgacagtaag
tcacctggggcttccaacctgaagatctcacggatggataagacggctggttcggtgcgg
ggaggggacgaggtctacttgctgtgcgataaagttcagaaagatgacatagaggtgcgg
ttctacgaggatgatgagaacggctggcaggccttcggggacttctcccctacggatgtt
cacaagcagtacgccatcgtcttccgcacgccgccctaccataagcccaagatcgaccgc
cccgtcactgtcttcctgcagctgaagcggaagcgtgggggagacgtgagcgactccaag
cagttcacctactacccagtggtggaagataaggaggaggtggagaggaagcggaagaag
gtgctgcctcagttcccccagcactttggtgggggctcgcacatgggcggggccggcggg
ggaagcggtggctttggctccggtggaggcggaaatctaaactatccatattcctcgggg
ctgacttacaacaacatctactcatctggcccccaccctgtgggtggctaccaagggggg
gtgcagatgaccagggccaccaagatggaagaggagggggatggcgagcacctgcctgtg
gagactgggaagcagccctgccctccagaggagagccaccggcagcagctgcatcaccat
gcccagctctgcagcatgaggatgctggctctggctcagcgcagcgcccatgccctgctg
gactactcggtcactgctgacccacgcatgctgctggccgtgcagcggcacctggccgcc
tcccaggatgagaatggagacacgcctttgcatcttgccatcatccatgagcagacgact
gtgatcgagcagctgatccaggtcatcctcagcatccccaaccagcagatcatcaacgtg
gccaaccacttgcagcagactcccttgcacctggcagtgatcactaagcagcaccaggtg
gtgaggttactgctgcaggcccaagcagaccccaccctgctggatcggtacggcaattcg
ctgctgcacctggcactccagacaggcgatgaggccatgctgaagacattgctggggcac
ctggactcctccggcccctgtctgctcagcacacccaattatcatggtttgctccccgtg
cacctggctgtgagggtgaagagcctggcctgcctggacctgctggtgaggatgggagca
gacgtgaatgccgtggagcggcaagggggccggacacccctgcacctggccgtggagatg
gagaacctcaatgtggctggccatctggtgaagaagctgggagctgatgtcaatgctcgg
acatttgctggaaacacccctctgcacctggctgcaggcctgggctcccccatcctcacc
aaaatgctcatcaaagcaggaggggatgtcctctgtgagaacgatgagccggtgaggtcg
tcctcgtccgaagccagcagcgacacggacagtgggcccgaggagcaggaggcagacatg
gagctgggagaatcagacacagagcacacagataccagcaccgctaccgagcacagaagc
agggagcctggcactcggggtgcaaggcagcggcggagacacacaccgcttgacttaacc
aggagccacaaggtgcgggagatcttgctgcgtgcctcgctgcaaggcccggagtcagag
cagcctgccgcccccaggccagggaccatcctgtcactcgacagcaacaccctgcagggc
ctggagcagttactgaaccaggaccgcagcggctcggactggactgagctggcccaaaga
ctgggcctgcgcagcctggtggagacgtacaaggacacggcctcccccagcgggagcctc
ctgctcagttatgagctcgctggcggcagcctggggggcttgctggaggcgctggactcc
atggggctcagcgagggagtgaggatgcttcgcaaagcagagacggccgacaagctgcaa
agcacagagctcaaggaggacagtgcctatgggagccagtcggtggaagaggagcagccg
ccggccccaccgctgaagctgcacccgctgccctctgcagagctgctcggcgagcccccc
cacagccagcagcagcaggtgcactga
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