Dermochelys coriacea (leatherback sea turtle): 119859264
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Entry
119859264 CDS
T09064
Symbol
NXF1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03008
Ribosome biogenesis in eukaryotes
dcc03013
Nucleocytoplasmic transport
dcc03015
mRNA surveillance pathway
dcc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119859264 (NXF1)
03015 mRNA surveillance pathway
119859264 (NXF1)
03008 Ribosome biogenesis in eukaryotes
119859264 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119859264 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119859264 (NXF1)
03009 Ribosome biogenesis [BR:
dcc03009
]
119859264 (NXF1)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119859264 (NXF1)
mRNA cycle factors
Stress granule specific factors
119859264 (NXF1)
Ribosome biogenesis [BR:
dcc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
119859264 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_8
Luteo_coat
UBA_4
Motif
Other DBs
NCBI-GeneID:
119859264
NCBI-ProteinID:
XP_038267074
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All DBs
Position
7:complement(33857136..33867289)
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AA seq
634 aa
AA seq
DB search
MAEEGKGGYSEHDDRVGGTGGGGGFAGRRRKGRGPFRGKMYSEGNHRSWNRGVAGPSPSG
QLEEGDGDVPMSDAHDSLRTRYTPYGPRLNRRGDDWHSRGRGGATNIHVTVKRDLTPQDR
SGSASRNSSRRRWYKVTIPYGKXYEKSWLLSSLQNLSSVPFTPVEFHYDQSRAYFYIEDM
TTANALKQLSRKITDQDNYKVVLIVNHSSPPQSVQKELKPEEIEQLKGVTMSKRYDGSQQ
ALDLKNLRTDPDLVAQNIDVVLNRRNCMQAVLQIIEENIPELLSLNLTGNKLYQLDDLAE
LVQKATNLKILNLTRNELKSECELDKVKELKLEELWLDGNPLCNNFRDQSSYVSSIRLRF
PKLLRLDGHELPPPIVFDVEAPTTLPPCKGSYFGSDDLKGLVLRFLQQYYSVYDSGDRQG
LLDAYHDGACCSLSIPFLSQNPSRSILSEYFKGSRNVKKLKDPTLRFKLLKHTRLNVVAF
LNELPKTQHDINSFVVDVCAQTNTLLCFAVHGVFKEVDGKSRDVVRGFTRMFIAVPAGIT
GLCIVNDQLFVRKANTEEIRKAFVMPAPTPSSSPVPTLSAEQQEMLQAFAMQSGMNVEWS
QKCLQDNDWDYSQAAQVFTQLKTEGKIPDVAFLK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagggaaaggggggtacagtgaacatgatgaccgtgtgggcggcacaggt
ggtggtgggggcttcgctgggaggaggaggaaaggtcggggaccgttccgaggcaagatg
tacagtgaggggaaccaccgctcgtggaaccggggtgtagcaggtcccagcccttctggt
cagctggaggagggtgatggagatgttcccatgagcgatgcccatgacagtcttcgaacc
agatacactccctatgggccacggctgaacaggcgaggcgatgactggcacagccggggc
cggggaggtgccaccaacatccatgtcacagtgaaacgagatctcacgccccaggaccgg
agtggcagtgccagccgcaacagcagccggaggaggtggtacaaggtcacaattccttat
ggaaagnagtatgaaaagtcatggcttctgagctccctccagaacttgtccagtgtccct
tttaccccagtggagttccactacgaccaaagccgggcctacttctatattgaggacatg
acgacagccaatgcgctcaagcagctgtcccgcaagatcacagatcaagacaattacaag
gtggtgctaattgtcaaccactcatctccaccccagtctgtccagaaggagctgaagcca
gaggagattgagcagctgaagggagtcaccatgagtaagagatacgacgggtcccagcag
gccctggacctgaagaaccttcgcacagacccagacctggtggcacagaacattgatgtg
gtgctgaaccggcggaactgcatgcaggccgtgctgcagatcattgaagagaacatcccg
gagctgctctcgctgaatctcaccggcaacaagctgtaccagctggatgatctggcagag
ctggtccagaaagccaccaatctcaagatcctcaatctgacccgcaatgagctgaagtct
gagtgcgagctggacaaggtgaaggagctcaagctggaggagttatggttagatggaaac
cctctgtgcaacaatttccgggaccagtccagctatgtcagctccatccgactgcggttc
ccgaagcttctgcgcttggacggccatgagctcccccctcctattgtctttgacgtggaa
gcacccaccaccctcccaccctgcaagggcagctacttcggctcagatgacctcaagggt
ctggtgctgcgcttcctgcagcagtattactctgtatatgactctggcgacaggcagggg
ctgctggatgcctaccacgatggggcctgctgttccctcagcatccctttcctctcgcag
aacccctccaggagcatcctgagtgaatacttcaagggcagcaggaatgtgaagaaactc
aaggaccccaccctacgcttcaaactgctcaagcatacgaggctgaacgtggttgccttc
ctcaacgagctgcccaagacccagcatgacattaactcctttgtggtggatgtctgtgca
cagacaaacaccctgctgtgctttgctgtccatggagtcttcaaagaagtggatggcaag
tcccgggatgtggtgagaggcttcacccgcatgttcattgctgtgccggctggtatcaca
ggattgtgcattgtgaacgaccagctgtttgtgcgcaaagcgaacacggaagagatccgc
aaggccttcgtgatgccagcacccacgccctcgtccagccctgtgcccacgctgtcagct
gagcagcaagagatgctacaggcctttgccatgcagtctggcatgaacgtcgagtggtcc
caaaagtgcctccaggacaatgactgggactacagccaggcagcccaggttttcacccag
ctcaagacggaggggaagatcccggacgtggcatttctcaagtga
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