Dermochelys coriacea (leatherback sea turtle): 119859280
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Entry
119859280 CDS
T09064
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04120
Ubiquitin mediated proteolysis
dcc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119859280 (SYVN1)
04120 Ubiquitin mediated proteolysis
119859280 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119859280 (SYVN1)
Enzymes [BR:
dcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119859280 (SYVN1)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119859280 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
U-box_ZFPL1
zf-RING_Vps41
zf-HC5HC2H
FAR1_N
zf-C3H2C3
Endonuclease_7
zf-Nse
Motif
Other DBs
NCBI-GeneID:
119859280
NCBI-ProteinID:
XP_038267106
LinkDB
All DBs
Position
7
Genome browser
AA seq
679 aa
AA seq
DB search
MCADGTSQTEVRCLLASGLPVEGGVRRSWLWCWEQQPGGLLNPGRWAGEMFRTAVMMAAS
LALTSVVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQLRA
AEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSP
NISWLFHFRIISLMLLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIK
YILHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLA
MRQFKRAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVVGAKRLPCNHIF
HTSCLRSWFQRQQTCPTCRMDVLRASLPSQSQTPPEQQEQAQQQQQQPPPHHTPLIPQPP
NFPQGILPPFPPGMFPLWPPIGPFPPVPGVQPPNNAENPSAASGAPSASGIQTTASTSRP
GGDSASGSDTAPVGTVPGFPFPPPWMGMALPPLFGFPPMPVPPAGFAGLTDEELRAMEGH
DRQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGSPRPTQLPSSLNTSTSSQETPTR
ESTTFNSPDSTSSPGTSPAVEPDSTGQTDDPSGLVGAEGYTEPAGHKEEEEQPLPGEPDT
AELRRRRLQKLESSSSPSH
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcggatggtacatctcaaacggaagtgaggtgtctcctagcttcaggacttccg
gtggagggcggggtgaggcgcagctggttgtggtgctgggagcagcagcctggggggctc
ctgaatcctggtcgttgggctggggagatgttccgaactgcagtcatgatggctgccagc
ctggctctgacatcggtggtagtggctcacgcctattacctgaagcaccagttctaccca
acagtggtgtatctgaccaaatccagccccagcatggcagttctctacattcaggctttt
gttttggttttcctcctgggcaaattcatgggcaaagtgttttttggccagctccgagca
gcagaaatggagcacctacttgagagatcatggtatgcagtcacagaaacttgcctggcc
ttcaccgtcttcagggatgacttcagtccccgctttgtggccctcttcacccttctccta
ttcctcaagtgcttccactggctcgctgaggatcgggtggactttatggagaggagtcca
aacatctcctggctctttcatttccgcataatctctctgatgcttttgttgggcatcctg
gatttcctatttgtcagccatgcctaccacagcatcctcacccggggagcctctgtccag
ctggtctttgggtttgagtatgccatcctcatgaccatggtgctcaccatcttcataaag
tacattctgcattcagtcgacctgcagagtgagaatccatgggacaacaaggctgtctac
atgctgtacacggagctcttcacaggcttcattaaagtgttgctgtacatggccttcatg
acaatcatgatcaaagtgcacactttccctctcttcgctatccggcctatgtacctggca
atgaggcagttcaagagagctgtgactgatgccatcatgtcacgccgtgccattcgcaac
atgaacactctatatcctgatgccactccagaagagcttcaagccatggataatgtttgt
attatctgtcgggaggagatggtggtgggcgctaaacgcctgccatgcaaccacatattc
cacaccagctgcctgcgttcatggttccagcggcagcagacctgccccacctgccgcatg
gacgtcctccgtgcctccctcccgtctcagtcccagacgccacccgagcaacaggagcaa
gcacagcagcagcaacagcagccaccaccacaccatactccactgattccccagccccct
aacttcccccaaggaatcctgcccccgtttcctcctgggatgttccccctctggcctccc
ataggtccatttcctccagtgcctggtgtccagccacccaacaatgcagagaatccctct
gctgcttccggtgcaccctccgcttcaggcattcagacaacagcgagtacctcaagacct
ggtggtgattcagcatctggatcggacactgcccctgtgggaactgtgcctggctttccc
ttccctcccccgtggatgggaatggcattgccacctctatttggcttccctcctatgcct
gtgccacccgccgggtttgctgggttgacagacgaagagctccgtgccatggaaggacat
gaccggcagcatctggaagccaggctccagtgtctgcagaacattcacacactcctagat
gcagccatgttacagataaaccagtatctcactgttctggcgaccattgggtcaccccgt
cctacgcagctgccaagctccttaaacacttcgacctcctctcaagagacacccaccaga
gaatccaccactttcaattcacccgacagtacctcttccccagggacctctccagcagtg
gaaccagactcaacaggtcaaacagatgatccatctggattggtgggtgcggagggatac
acagagccagctgggcacaaggaagaagaggagcagcctttaccaggggagcctgacaca
gctgagcttcgcaggcgccggcttcaaaaactggaatcctcctcttccccttcccattga
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