Dermochelys coriacea (leatherback sea turtle): 119859488
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Entry
119859488 CDS
T09064
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcc03016
]
119859488 (TRUB1)
Enzymes [BR:
dcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
119859488 (TRUB1)
Transfer RNA biogenesis [BR:
dcc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119859488 (TRUB1)
Prokaryotic type
119859488 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
119859488
NCBI-ProteinID:
XP_038267610
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Position
7:complement(113955808..113998152)
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AA seq
290 aa
AA seq
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MAEKVHGKLGHVLANTAAAKLFSLSGLFAVYKPKGPTSANVLNQLKEKLLAEAGIQKCAR
KRKKQILKIGHGGTLDSAAAGVLVVGIGKGTKMLSNILAGSKKYMAIGELGKATDTLDAT
GKVTEEKPYDQITKEDLERVLKKFTGDIMQVPPLYSALKRDGQRLSSLMKKGEAVEAKPA
RPVTVYSLSLQNFQPPLFTLDVECGGGFYVRSLVSDIGKELSSCANVQELTRTKQGPFTL
EEHALHEDKWTIDEIAQSLEHCMSLLAVEPSLKKLKTEHSEESTVNCEDK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaggtgcacgggaagctggggcatgttctggccaacacagcagcagctaaa
ctcttctccctgagcgggctgttcgctgtgtataaacccaaagggcccacttcagctaac
gtgctcaaccagctgaaggagaagctgctggcagaagctggtatacaaaagtgtgcaaga
aaaaggaaaaaacagattttgaagattggacatggtgggactctagatagtgcagctgca
ggagttctggttgttggtattggaaaaggaactaaaatgctgagcaacattttggcaggc
tccaagaagtacatggccatcggggaattgggaaaagctactgatacattagatgctaca
ggaaaagtaactgaagaaaagccttatgatcagataacaaaagaagatcttgaacgtgtg
ttgaaaaagtttacgggggacataatgcaagttcctccactctattctgctctgaaaaga
gatggacaaaggctgtcgtctctgatgaagaaaggagaagcagtggaagcaaagcctgct
aggccggttacagtatacagcctctctctccaaaacttccagccaccgctgttcacactg
gatgttgaatgtggaggtggcttttatgtgagaagcctggtcagtgacatcggaaaagaa
ctctcttcctgtgccaatgtgcaagagctgacccggaccaaacaaggaccatttacacta
gaggagcatgcacttcatgaagacaaatggacaattgatgaaattgcacagtccttggag
cattgcatgtctcttcttgcagtagaaccatctcttaaaaaattaaagactgagcattct
gaagaatccactgtgaattgtgaagataagtga
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