Dermochelys coriacea (leatherback sea turtle): 119859699
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Entry
119859699 CDS
T09064
Name
(RefSeq) protocadherin alpha-C2-like isoform X1
KO
K16493
protocadherin alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcc03036
]
119859699
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119859699
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
119859699
Cell adhesion molecules [BR:
dcc04515
]
Cadherins
Protocadherins
119859699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Motif
Other DBs
NCBI-GeneID:
119859699
NCBI-ProteinID:
XP_038268038
LinkDB
All DBs
Position
8:37757915..38047969
Genome browser
AA seq
990 aa
AA seq
DB search
MASSSPRRCSGAAALRIPALVLLLCLGPAGGQLRYSVQEELQRGALVGNVASDLDVDPQR
LSARGARLTSGSGRQYLELDLGRGALLVKERMDREALCELSPSCFLSLELVIEQPIEVHN
VEVEVLDINDNAPHFPRQDYRLEVSESAVPGARFHIESAQDPDVGTNSVQSYRLSPNQHF
ALDLKGFQRGSKLLELVLQQPLDREQSALQQLVLTAMDGGSPSRSGTAQISIRVMDTNDN
SPVFDRSTYSVNLLENAVPGTLVVKLNASDPDEGSNGEVLYSFSGYTPQKVRQLFSIDPV
SGEVRVNGTLDYEEASSYEIYVQATDRGPVSMTGHCKVLVNIVDANDNAPEVVLTSLYSP
VPENARPETVVALMSVTDQDSGPNKQVSLSIPPNIPFKLNSFKNSYTLVTQGNLDRERAS
SYNITVTATDAGTPPLSSHKVIQVYISDVNDNPPRFEEPMYSVYIPENNALGVSLCTVKA
IDPDANENAYVSYSLLKGEIQGLPVTSYVSIKSEGGNIYAVNSFDYEKLREFQVVVQAQD
AGTPALSSTVTVHVYVVDQNDHAPQILYPTSTNASAALEMIPRSAHAGYLVTKVIAIDAD
SGQNAWLFYYLAQASDPDLFRVELHSGEIRTTRKLGDDSGTTFNLSVVVRDNGEPSLSSA
VAITIAVVDRVSKIIPDTRRHIKSARNYSEITLYLIIALSSVSFIFLLTIIVLTVIKCYR
YSVYGDSCCGSFCGLRERYPAEMYKQANNNIDARIPHGLKVQPHFIEVRGNGSLTKTYCY
KACLTAGSGSDTFMFYNTGGPTGTGPHAVMAERHLTGQSGQSAQNLIILKNDSITPNEPK
QPNPDWRYSASLRAGIQSAVHMEEAGVLRGGLGGSEQLWPTVSSATPEPEAGEVSPPVGA
GVNSNSWTFKYGPGNPKQAGPGELPDKFIIPGSPAIISIRQEPPNSQTDKSDFITFGKKE
ETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttctccccgccgctgctctggggcggcggcgctccggatcccggctcta
gtgctcctgctgtgcctggggccggcaggcgggcagctccgctactcggtgcaggaggag
ctgcagcgcggcgccttagtggggaacgtggcgagcgacctggacgtggatccgcagcgg
ctgtcggcccggggcgcacggctgacctcgggcagcgggcggcagtacctggagctggat
ctgggccgcggagcgctgctggtgaaggagcgcatggaccgggaggcgctgtgcgagctt
agcccctcctgcttcctcagcctggagctggtgatcgagcagcccatcgaggtgcacaac
gtggaggtggaggtgctggacatcaacgacaacgcgccccacttcccgcggcaggactac
cggctggaggtcagcgagtctgctgtgcccggcgcccgcttccacatcgagagcgcgcag
gaccccgacgtgggcaccaactcggtgcagagctaccggctcagccccaaccagcacttc
gccctggacctcaaaggcttccagcgcggcagcaaacttctggagctggtgctgcagcag
cccctggaccgggagcaaagcgccttgcagcagctggtgctcaccgctatggatgggggc
agcccttccaggtctggcaccgcccagatctccattcgggtcatggacacaaacgataac
tcgcccgtctttgaccgatccacctactcagtgaacctactggagaacgcggtcccgggc
acgctggtggtgaagctgaacgcctcggacccggacgagggctccaacggggaggtgctg
tactccttcagcggctacaccccccagaaggtgcggcagctcttcagcatcgaccccgtc
tccggcgaggtgagggtcaacggcacgctggactacgaggaggcctcctcctatgagatt
tatgtgcaggccaccgaccggggccctgtgtccatgaccgggcactgcaaggtgctggtc
aacatcgtggacgccaacgataatgcccccgaagtggtgctgacctccctgtacagccca
gtgccggagaacgcccggcctgagaccgtggtggctttaatgagtgtaaccgaccaggac
tccgggccgaacaagcaggtcagtctgagcatccctcccaacatccccttcaaactcaac
tccttcaaaaactcctacacgctggtcacgcagggcaacctggaccgcgaaagggcttcc
tcctacaacatcacggtcacggctacggacgccgggacccctcccctctcttcccacaaa
gtgatacaagtgtacatctccgatgtcaacgacaaccctccgcggttcgaagagcccatg
tattctgtttacatccccgagaacaacgcgcttggggtttcgctgtgcactgtcaaagcc
atcgatcccgatgccaacgaaaatgcctatgtgtcctattctctcctgaaaggggaaatt
caagggctacctgtcacatcctacgtctccattaaatccgagggtggtaacatatatgcg
gtcaactcctttgattacgagaagttaagggagtttcaggttgttgttcaggcccaggat
gctgggaccccagcacttagcagcactgtcactgtccacgtgtatgtggtggatcagaat
gaccacgcccctcagattctgtaccctacctcaaccaatgcctcggcagccttggagatg
atccctcgctcggcacacgcaggttatttggttaccaaagtaatagccattgatgcagac
tctggacaaaatgcatggttgttctactatctggctcaagcctcagacccagatctcttc
agagtggagctacacagcggggagattaggactactcgcaaactgggggatgacagtggt
actactttcaacctgtcagttgttgtgagagacaatggagagccatccctgtcctcagca
gtagccataaccatcgctgttgtggatagagtttccaaaatcatccctgacacaaggagg
catatcaaaagtgctagaaactactcagagataacactgtatctcattattgctctgagc
tcagtttcattcatatttcttttgacaatcattgtcctaacagtcatcaagtgctacaga
tacagtgtgtatggtgactcctgttgtggaagtttttgtgggctcagagaaagatatcct
gctgaaatgtacaagcaggctaacaacaacattgacgctaggataccgcatggtttaaaa
gtacagccacattttattgaagtgcgggggaatgggtctctcactaagacctactgctat
aaggcatgtctgactgcaggatcaggaagtgacactttcatgttttacaatactggtggc
ccaacgggaacgggtcctcatgcagtgatggctgagagacatctgacaggacagagtggt
cagagtgcacaaaacctgatcatacttaaaaatgactccattacgcctaatgagccaaaa
caacccaatcctgattggcgttattctgcatccctaagagcaggaatacaaagtgctgtg
cacatggaggaggcaggagtcttacgaggagggctgggaggatctgaacagctgtggcca
acagtatccagtgcaacaccagaacctgaggcaggagaggtttcccccccagtgggagct
ggtgtgaacagcaacagctggacctttaaatatggacctggcaatcccaaacaagctggt
cccggtgagttgccagacaaattcattatccctggatctcctgcaatcatctccatccgg
caggaaccaccaaacagccaaactgacaaaagtgacttcataacctttggcaagaaggag
gagaccaagaaaaagaaaaaaaagaagaagggaaacaagactcaggagaaaaaagaaaag
gggaacagcactactgacaacagtgaccagtga
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