KEGG   Dermochelys coriacea (leatherback sea turtle): 119859774
Entry
119859774         CDS       T09064                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
dcc  Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04115  p53 signaling pathway
dcc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119859774 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    119859774 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcc04121]
    119859774 (COP1)
Enzymes [BR:dcc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119859774 (COP1)
Ubiquitin system [BR:dcc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119859774 (COP1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119859774 (COP1)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 zf-C3HC4_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_CAF1B_HIR1 zf-RING_UBOX Beta-prop_EML zf-C3HC4_3 zf-RING_5 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 zf_C2H2_10 Sina_RING zf-RING_11 zf-Nse
Other DBs
NCBI-GeneID: 119859774
NCBI-ProteinID: XP_043376072
LinkDB
Position
8:complement(50243454..50437342)
AA seq 783 aa
MSGSRQPPLQHAPPGGQGAAASAVTSASSSSSSAAPGSCSSSAGPPARPVLVAAASGLSR
LAGAARPGGGSSSGGGSSSGGGGSRKRPLLTPLCNGLLNSYEDKSNDFVCPICFDMIEEA
YMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFK
LDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILME
FLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSNSNII
DSTEYSQPPGFSGNSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMTRVSDDSRPT
SQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIK
VYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRS
KVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPS
SRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWN
VGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSV
LDKDRKEDDTNEFVSAVCWRALPDGVTLADMLLRVTEAAREQLLQTSRGSFPGIALGHAD
LLQLAGLLRGYKKLLALQDSGSSAHLSPIPLPCPRRTVLSAVANVSDSSEVLRCSWGSWW
GRS
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgtcaggcagccggcagccgccgctgcagcacgctcccccgggcgggcagggcgccgcg
gcctccgccgtcacttcggcttcgtcgtcgtcgtcgtcggcggcgccgggctcctgctct
tcgtccgcggggccccctgcgcggcctgtgctggtggctgcggcctctgggctttcccgg
ctggcgggggcggctaggcccggcggcggctcctcatcgggcggcggctcctcgtcgggc
ggcggcgggagcaggaagaggccgctgctgaccccgctctgcaacgggctcctcaactcg
tacgaggacaagagcaacgacttcgtgtgccccatctgttttgatatgattgaagaagca
tacatgacgaaatgtggacacagtttctgctataaatgtattcatcagagtctggaggat
aacaaccgttgccccaaatgtaactatgtggttgataacatagaccatctttaccccaac
tttttagtgaatgagctcatcctcaaacagaagcaaagatttgaggaaaagcgattcaaa
ctggaccattcagtgagtagcaccaatggacatagatggcagatatttcaagacttattg
ggaactgatcaggataaccttgacttggccaatgttaacttgatgttggagctgcttgtg
caaaagaagaagcagttggaggcagagtcccatgctgcccaattacagatccttatggaa
ttcctcaaggttgccaggagaaataaaagagagcaactggagcagatccagaaagagctg
agtgttctggaagaggatattaaacgagtggaggaaatgagtggcttgtattccccagtc
agtgaggatagtacggtgcctcaattcgaagccccctcgccttcgaacagtaatattatc
gattccacggagtacagccagcctccaggattcagtggcaattctcagactaaaaaacag
ccatggtataacagcacgttggcatcaaggcggaagaggcttacagctcattttgaggac
ttggagcagtgctatttttccaccaggatgactcgtgtatcagatgacagcagacctaca
agccagctggatgaatttcaggagtgcctatccaagttcactcgctacaattctgtccga
cctttggcaacgctgtcttatgctagtgatctttataatggctccagcatagtatccagt
atcgaattcgaccgggactgtgactattttgctattgctggggtgacaaagaagattaaa
gtctacgagtacggcacagtcattcaggacgcagtggacattcattatcctgagaatgaa
atgacctgtaattccaaaatcagctgtatcagctggagtagctaccacaagaacctgtta
gccagcagtgactatgaaggcacagtcatcctgtgggatgggttcacaggacagagatca
aaggtctaccaggagcatgagaaaagatgctggagtgttgactttaacttgatggaccct
aaactactggcttcaggctctgacgatgcaaaggtgaagctgtggtctaccaacctggat
aattcagttgcaagtattgaggccaaggctaatgtgtgttgtgtcaaattcagcccctct
tctagataccatctggcttttggctgtgcagatcactgtgttcactactatgatcttcgc
aacactaagcagccaatcatggtgttcaaagggcatcgcaaggcagtctcctatgcaaag
tttgtgagtggagaagaaattgtctctgcgtcaacagacagtcagctgaagctatggaat
gtagggaaaccacactgcctgcgctctttcaagggtcacatcaatgagaagaattttgta
ggcctggcatccaacggagactacattgcctgtggaagtgaaaataactccctctacctg
tactacaagggcctctcaaagacacttctgactttcaaatttgacacagtaaaaagcgtc
ctggacaaggaccggaaagaggatgacacaaatgagtttgtcagtgctgtgtgctggagg
gcactgccagatggggtgaccctagctgatatgctcctgagggtaacagaggcagcaagg
gaacagctgctgcaaacatccagaggttccttccctggcatcgctctcggccatgctgat
ctgctgcaactggctggactgctccggggttataaaaagctcctggctctccaggacagt
ggatccagtgcccacctgtctcccattcctcttccttgtccaagaaggacagtgttgtct
gcagtggccaatgtctccgactcctcagaggtactgcgctgctcttgggggtcatggtgg
ggtcgcagctga

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