Dermochelys coriacea (leatherback sea turtle): 119859868
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Entry
119859868 CDS
T09064
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-A10-like
KO
K16495
protocadherin gamma subfamily A
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119859868
Cell adhesion molecules [BR:
dcc04515
]
Cadherins
Protocadherins
119859868
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_C_2
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
119859868
NCBI-ProteinID:
XP_043346621
LinkDB
All DBs
Position
8:38384672..38543830
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AA seq
1061 aa
AA seq
DB search
MGLQSGEIRTARAFADRDAVKHRLVTLVKDNGQPPLSATVTLNLVFAENFQEALPEMSDL
SGDSASQSDLQFYLVLALALISFLFLITIIVVIAMKVRSSKGSSILQYVMPALYSKADPR
FLPDYKDGTLPYSYNLCLATDCGQNGFNLLKSSDHNITSENILCNDNSGILLGNNCGSEA
PKSGSETLLKRNGKRDPANPTRSYTAQNTEIRLRGILQRNIYETGLILTSVVAKIGLRLK
ENPYLTGNQSTIYIRRKIEYIQSLRDCKRRALFCFLLVPVWEAVSGQIRYSIPEETHTGS
FGGNIAKDLGLDLKELSDCCVRIVARGRSQYFALNVKSGHLYTTDRIDREEICGRIGICL
IKLEVLLEDKAKLFPVEVEIIDINDNAPGFXSEKLELKISETTAVQTRISLQRSQDPDVG
INSIQIYQLSDNRHFSLDVQTRTNDVKYAELVLEKSLDRVEQAVHDLILTATDGGDPVRS
RTAQIRVIVLDANDNAPVFTEAIYRARVLENVPKGSTVVSVKATDPDEGVNKELKYSFRT
IVGKGSQIFHLDSRTGEVTVVGNLDFEESALYEIEVQAHDGGGHFDRSKILIVVSDVNDN
APELTITSLVNSIPEDSPRGTVIALLNVQDLDSGENGEVTCSISSNLPFRLKKLLDNYYS
LVIDRTLDREQASNYNVTVIATDQGTPPLSSVTSIFLQVSDENDNPPIFNQTSYISYVRE
NNVKGASVCSVKANDYNMEDNSRITYSITGTQIQEVPLSSSISINSETGALYALRSFDYE
QCREIRFQVQAQDGGSPPLSSNVSVTLFILDQNDNSPHILHPSFPTDGSTGVELAPRSSE
PGYLVTKVVAVDADSGQNAWLSYQLLKATEPGLFSVGLHSGEIRTARSFVDKDALKQSLV
VSVKDNGQPPLSATATVTVVVTDSIPEILSDLSSLSAPADPQSSLTLYLVIAVASVSCLF
FTFIIVLLTLRLRRWRNSQLFDSSSVTFSXALPFVGIDGVRAFVYSYSHXGSLTMDSRKS
QFNFSKTNYSNTLSSEQTCAIKDPILVIEDVSISNGDRTSV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcagagcggggagatccggacagcccgcgcctttgcggacagagatgccgtg
aagcacaggctggtcaccctggtgaaggacaacgggcagccgcctctgtccgccacagtg
actctcaacctggtgtttgcggagaacttccaagaggctcttccggaaatgagcgaccta
tcgggtgactcggcatctcagtctgatttacagttctacttggtgttggctttagccctg
atctcatttttatttctaattacaattatagtggtgatagccatgaaagttagaagttca
aaaggttcctctattcttcagtatgtcatgcctgctctttattccaaggctgatcccaga
ttcctaccagattacaaagatgggaccttgccgtattcctataatttgtgtttggctaca
gactgcgggcaaaatggatttaacttgcttaaaagtagtgaccataacattacatctgag
aatatcctttgcaatgacaactctgggattttacttgggaataattgtggttctgaagca
cccaaatccggatccgaaactcttctcaagaggaatggaaagagagatccagccaacccc
acccgcagctacacagcacagaacacagagatcagactcagaggaattttacagagaaat
atttatgaaacaggcttaattttaacatcagtggttgcgaaaataggactacggttaaaa
gaaaatccatacctgactgggaatcagagcactatatacatccggagaaaaattgagtat
atacaaagtctccgggactgcaaacggcgagccctgttttgttttttattggttcccgtt
tgggaggcggtttctggtcagattcgctattcgatcccggaggaaacgcacacaggctct
ttcggggggaatatagcaaaggatttgggactggatctaaaagagctctcagactgctgt
gtccgcattgttgccagaggtaggagtcagtattttgctttgaatgttaagagtggccat
ttatacaccacagacagaatagacagagaggagatctgtggccggatagggatatgtttg
ataaagcttgaggttctccttgaggataaagcgaagctttttccagttgaagttgaaatc
atagatattaatgataatgctccaggcttctaatcagagaaattagagttaaaaatcagc
gagacaacagcagtacagacccggatttccctgcagcggtcgcaggatccagatgtggga
attaattctatccagatatatcaactgagcgataataggcatttctctctggatgtgcaa
actagaaccaatgatgtgaaatatgccgagctggtgctggaaaagtctctagaccgggta
gaacaagctgttcacgatctaatcctcacagccactgacggaggagatccagtcaggtcc
cgcactgcgcaaatccgcgttattgttcttgatgcaaatgacaacgcgcccgttttcact
gaggctatctatagagcgagggttttggaaaatgtgccgaaaggttccacggtggtatca
gtaaaagccactgatccggatgaaggagtcaacaaagagttaaaatactcattcagaaca
atcgtgggaaaaggttcccaaatattccacttggattctaggacgggagaagtaacagtc
gtggggaacttggactttgaggaatccgcattatatgaaatcgaagtgcaagcccatgac
gggggaggccatttcgacagatcgaaaatactgatcgttgttagcgatgtgaatgacaac
gctccagaattaacaatcacatctctcgtcaactccatccctgaggactctccccgcgga
actgtgatcgcccttttaaatgtgcaagatctagattccggagagaatggggaagtcacg
tgctccatatccagcaacctccccttccggctgaagaaattattagataattattacagt
ttggtgattgacagaaccctggacagggagcaggcatcgaattacaatgtaacagttata
gccacggatcaagggactcctcctttgtcttcagttacttccatctttctacaagtttca
gacgaaaatgataatcctcctatatttaaccagacgtcctatatttcgtacgtcagagaa
aacaatgttaaaggagcttccgtttgctctgtaaaggcaaatgactacaacatggaggac
aactcccgaatcacttactccattactggaactcagatccaggaagttccgctgtcctcc
tccatctccattaactccgagactggggctctctacgctctgcgctccttcgattacgaa
cagtgccgggagattcggttccaagtgcaggctcaggatgggggttccccacctctcagc
agtaatgtctccgtcactctctttatactggatcagaatgacaacagcccacacatctta
cacccctcctttcccaccgatggctccacgggagtggagttggcccctcgctcctccgag
ccgggttacctggtcactaaggtggtggcggtggatgcagactccgggcagaacgcctgg
ctctcctaccagctgctgaaggctacagagccggggctcttctctgtaggactccacagc
ggcgagatcaggacagctcgctccttcgtagacaaagatgcgctcaagcaaagtctggtg
gtttcagtgaaggacaacgggcagccccctctctctgccacggccactgtcacggtggtg
gtgactgacagcatccccgaaatcctctccgatttaagcagcctctcagctcctgcagac
ccccagtccagcctcaccttgtatttggtgatcgccgtggcttccgtttcctgcttgttc
tttacctttatcatagtgttacttaccctgaggctccgcaggtggagaaactcgcagctg
tttgattcctcgagtgtgactttcagtnnggcgctcccgtttgtggggatcgatggagtc
agagcttttgtttactcctactcacattagggttctctaaccatggactccagaaaaagc
caattcaacttctccaaaacaaactattcaaatactctgagtagtgagcaaacttgtgcg
ataaaggatcctattctagttattgaggatgtaagcattagtaacggggatcggacctct
gtttag
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