Dermochelys coriacea (leatherback sea turtle): 119860026
Help
Entry
119860026 CDS
T09064
Symbol
LAMB1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04510
Focal adhesion
dcc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119860026 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119860026 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
119860026
NCBI-ProteinID:
XP_038269088
LinkDB
All DBs
Position
1:325196203..325267909
Genome browser
AA seq
1787 aa
AA seq
DB search
MGCLQTCLGALLGLWAAALAQEPEYSYGCAEGSCYPATGDLLIGRASQLSASSTCGLHRP
EPYCIVSHLQEDKKCFTCNSLFPFHETLNSESHLIENVVTTFAPNRLKLWWQSENGLENV
TLQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWKVYRYFAYDCENSFPGVSTGP
MKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQNLLKITNLRINFTKLH
TLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCR
HNTKGLNCELCLDFYHDLPWRPAEGRHSNACKKCSCNGHSIQCHFDMAVYMATGNTSGGV
CDDCQHNTMGRNCEQCKPFYFQHPEREIRDPNICEPCNCDPLGSQNGGICDRYTDFSAGL
IAGQCHCKLFVEGERCDLCKEGFYGLSANNPLGCQSCACNPLGTLPGGNPCDSETGSCYC
KRLATGRHCEQCLSEHWGLSNDMDGCRPCDCDQGGAINNNCSSETGQCLCRPHMIGRQCN
EVESGYYFMSLDHYIYEAEEANFGSGVTIVERQYSQDRIPSWTGIGFVRVPEGAYLEFYI
DNIPYSMEYDVVIRYEPQLPDHWEKAVITVSRPGKIPTSSRCGNTVPDDDNQTVSLSPGS
RYVILPRPICFEKGLNYTVRLELPQYSSLNVEVESPYTLIDSLVLMPYCKSLDIFTVGGS
GEDMVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCNPQGSL
SSVCDSNGGQCQCRPNVVGRRCDRCAPGTFGFGPNGCKSCECHVQGSVSSFCHPETGQCH
CFHGVYSRQCDRCLPGYWGFPSCPPCQCNGHTDDCDPYTGKCLNCRDSTTGHNCERCLGG
YYGDPVLGSGDHCRPCPCPDGPESGRQFASSCYQDPINLQIVCVCNVGYIGSRCDECASG
FFGDPEETGGVCQPCQCNNNIDMTDPGACDKQSGKCLKCLYQTEGENCQLCKYGYYGHAL
QQDCRKCICNYLGTVREHCNSSEDCQCEKTTGQCQCLPNVTGQNCDRCAPHTWRLASGTG
CELCECDVARSFGPSCNEFTGQCQCMPGFGGRTCRECQEFFWGDPNVACQACDCDPRGIQ
TPQCNRSTGLCICKEGVEGPRCDKCTRGYSGIFPDCAPCHQCFALWDVIISELTNRTQRF
LERAKILKIIGVXGPYQQTVNTXEEKLNEIKSILAQNPAAEPLKNIGNLLRKQGDKLTAD
VTEKMAEIEDKLSVIALKNNNTDTHLRALETDAESLHHVVKELAEQLEFIKISDIRGALD
SVSKYFQMSLEAEERVNASSVHPDSLVELSAQTRQEVEDLISEQEAQFKAKQEEQSRLLD
ELAGKLQSLDLSEVAEKTCGTPSGASCADSECGGLNCRTEEGXKKCGGPGCEGLVTVAHS
AXQKAMDFDRDILSALAEVEELSKMVSEAKQRADGAKQNAQEVLLKTNATREQVDRSNED
LRNLIKQIREFLMQDSADLDSIEAVANEVLNMEMPSSPQQLQTLTEDIRERVESLSDVEV
ILQQSAGDIARAEMLLDEANKASKSAKDVKVTAAIVKEALEEAEKAQNAAEKAIKQADED
IRGTQDLLTSIESENAASEETLNNATLRLTELEKNVEDLKQKTATNSENVEEIEETIATV
KQNAEEVKEVLDSELNAKYKTVENLIAKKTEESADARKKAGMLQNEAKSLLAQANSKLQL
LKDLESTYENNQKVLEDKAKQLVELEETVRSLLQAISQKVAVYSTCL
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcctgcagacgtgccttggcgctctcctagggctgtgggccgccgccctggct
caggagcccgagtacagctacgggtgcgctgagggcagctgctacccggccaccggcgac
ctgctgatcggccgcgcctcgcagctgtccgccagctccacgtgcgggctccaccggccc
gagccctactgcatcgtgagccacctccaggaggacaaaaaatgtttcacctgcaattcc
ctgttccccttccacgagactctcaactctgagagccatcttattgaaaatgtggtcaca
acatttgctccaaaccgcctcaagctatggtggcagtcagaaaatggtttggaaaatgta
actctccagctggatctggaagctgaattccatttcactcatctcattatgaccttcaag
acattccgcccagctgcaatgctaatagaaagatcatctgattttggaaaaacctggaaa
gtatatagatactttgcatatgactgtgagaactcctttcctggtgtttcaactggaccc
atgaagaaagtagacgatatcatttgtgattcccgatattctgacattgaaccttcaact
gagggagaggtcatatatcgtgctttagatccagcttttagaattgaagacccatatagt
ccaagaattcaaaacctattaaaaatcacaaatttaagaatcaatttcaccaagttacat
acattgggagacaacctcttggattctagaatggagatcaaagaaaagtactactatgca
atttacgacatggtggttcgtgggaactgtttctgttatggccatgccagtgagtgtgca
ccagtggacggttttaatgaagaggtggaaggaatggtccatgggcactgcatgtgcaga
cataataccaaaggtttaaactgtgaactgtgtttggatttctatcatgacttaccatgg
agaccagctgaaggacgccatagtaatgcatgtaaaaagtgcagttgtaatggacactct
atccagtgtcattttgatatggctgtatacatggcaaccggaaataccagtggtggagta
tgtgatgactgccagcataacacaatgggacgcaactgtgaacaatgcaaaccgttttac
tttcagcatccagagagagagatacgagatcctaacatttgtgagccatgtaactgtgac
ccgcttggctcccaaaatggtggaatatgtgatcgctacactgacttctctgctggcctt
attgctggacagtgccactgtaaattatttgtggaaggggaacgttgcgacctctgcaaa
gaagggttctatggattaagtgcaaataatccccttggttgtcaatcttgtgcatgtaat
cctttgggaactcttcctggagggaatccttgtgattcagagaccggaagctgctattgt
aaacgtctagcaacaggaaggcactgtgagcagtgtctgtctgaacactggggcctgagc
aatgacatggatggatgtcggccttgtgactgtgaccaagggggagcaataaacaataac
tgctcaagtgaaactggccagtgtctgtgccggccccatatgattggacgccagtgcaat
gaagtagagtctggctattacttcatgtcattagaccactacatctatgaggcggaggaa
gccaactttggttctggagtgaccatagttgagcgccagtattctcaagatcgtatccca
tcctggactggaataggatttgtaagagtccctgaaggggcatatctggaattctatatc
gacaatattccatattctatggagtatgatgttgtgattcgctatgagccgcagttacca
gatcactgggaaaaagctgtaattaccgtttcacgcccaggcaagattcctacaagtagc
cgatgtggtaataccgttcctgatgacgataatcagactgtatcattatcaccaggctca
agatatgttatccttccacgacccatatgttttgaaaagggactgaattacactgttcgt
ctggagctaccacagtactcctccctcaatgttgaggtggaaagcccatacacactcatt
gactcgctcgttcttatgccttactgcaaatcactggacatattcacggtggggggctca
ggcgaagatatggtcactaacagtgcttgggaaacatttcaaagataccgatgtctggaa
aacagcaggagtgttgtgaaaacccctatgactgacgtctgcaagaatattatttttagc
atctctgcactgttacatgagacagcattatcttgccagtgcaaccctcaaggctcatta
agttcagtgtgtgactctaatggaggacagtgccagtgtcgtcctaatgttgttggaaga
agatgtgacagatgtgctcctggcacctttgggtttggacctaatggatgcaaatcttgt
gaatgtcacgtacaaggttctgtcagttccttctgtcatcctgagactggccagtgccac
tgtttccatggagtgtacagccgccagtgtgataggtgcttacctggatactgggggttt
ccaagctgtccgccttgccaatgtaatggccacacggatgactgtgacccatacactggg
aaatgtttgaattgccgcgattccaccacgggacacaactgtgaaaggtgccttggtggc
tattatggagaccctgtcctgggatcaggagatcattgtcggccttgtccttgcccagat
ggcccagaaagtgggcgtcagtttgccagcagctgttatcaagatcctattaatctgcaa
attgtgtgtgtctgtaatgtgggatacataggaagcagatgtgatgagtgtgcttctggt
ttctttggagaccctgaagagacgggtggagtctgccagccatgccagtgtaacaacaac
attgacatgactgacccaggggcctgtgacaagcagtctggaaagtgcctgaagtgcttg
tatcagacagagggtgaaaattgccagctgtgtaaatatgggtactatggacatgcattg
caacaggattgtagaaagtgcatctgtaattacttgggaacggtgcgagagcactgcaat
agctcagaagactgtcagtgtgagaaaacaaccggccagtgccaatgccttcccaatgtg
accgggcagaactgtgatcgttgtgcaccacacacttggagactggccagtggaactgga
tgtgaactgtgtgagtgcgatgttgctcgttccttcgggccatcgtgtaatgagttcact
gggcagtgtcagtgcatgcctgggtttggaggccgcacctgcagggagtgccaagagttt
ttctggggtgaccccaatgtggcatgccaagcttgtgattgtgatccccgtggaatccag
acacctcagtgcaatcgctccacagggctgtgcatctgtaaggagggtgtcgagggaccc
cgctgtgacaagtgcacccgcggctactctggcatcttccctgactgcgcgccatgccat
cagtgtttcgctctgtgggacgtcatcattagtgaactgaccaataggacacagaggttc
ctggagagagcaaaaatcctgaaaatcattggggtcngtggcccttaccagcaaaccgtc
aacactngtgaagagaagctgaatgaaattaaaagtatccttgctcaaaatccagccgct
gagccccttaaaaacattggaaatctcttgaggaagcagggtgacaagctaacagcagat
gttacagaaaagatggctgaaatagaagacaagctctccgtgatagcgttaaaaaacaat
aacacggacactcacctgagggccctggagacagatgcagagagcctacaccacgttgtg
aaagaacttgcagaacaactcgagtttataaaaatctctgatatccggggagccttggat
agtgtctccaaatattttcagatgtccctggaggcagaagagagggtcaatgcctccagt
gttcaccctgatagccttgtggaactgtcagctcagacacgacaggaagtggaagactta
atcagtgagcaagaggcccagttcaaggcaaaacaagaagaacagtcacgccttctggat
gaactcgcaggcaagctgcaaagtctggatctttctgaagtggctgagaagacatgtgga
actccctcaggggcttcctgtgctgactcagagtgtggcggtctgaactgccgaacagag
gaaggangaaaaaaatgtggaggaccaggctgcgagggattggttactgtggctcacagt
gcanggcagaaagccatggattttgacagagacatactcagtgccttggcagaagttgaa
gaactctctaaaatggtctcagaggcaaaacagagagcagacggagcaaaacaaaatgca
caagaagttttgctcaaaaccaatgccacaagagaacaagtggacagaagcaatgaagat
ctgagaaaccttattaagcagatcagggaatttctgatgcaggatagtgctgatttggat
agcattgaggcagttgctaatgaagtgttgaacatggagatgccaagtagcccccagcag
ctacagaccctgacagaggatatccgtgagcgtgtggaaagcctttctgatgtagaggtt
atcttacaacaaagtgccggagacattgccagagctgagatgctgttagatgaagcaaat
aaagcaagcaaaagtgcaaaagacgttaaagtcactgcagctatcgtgaaagaagcactg
gaagaagctgaaaaggcccaaaatgcagccgaaaaggcgatcaaacaagctgacgaagac
attagaggaacacaggacctacttacctcaattgaatctgaaaatgcagcatctgaagaa
accttaaacaacgctaccctacgtcttactgagctagagaagaatgtggaagatcttaaa
caaaagactgctacaaattcagagaatgtggaagagattgaagaaaccattgctactgtg
aaacaaaatgccgaagaagttaaagaggtacttgacagtgaactgaacgccaaatataaa
acagttgaaaacctaattgccaaaaaaacagaagagtctgctgatgccaggaagaaagct
ggaatgctgcagaatgaagctaaatcattgttagctcaagcaaacagcaaactccagctg
ctcaaggatttggaaagcacatacgagaacaatcagaaagtcttggaagacaaagccaaa
cagttggtggaactagaagaaacagtacgctccctcttacaggcaatcagccagaaagtt
gcagtatacagcacctgcttgtaa
DBGET
integrated database retrieval system
