Dermochelys coriacea (leatherback sea turtle): 119860373
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Entry
119860373 CDS
T09064
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03440
Homologous recombination
dcc03450
Non-homologous end-joining
dcc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119860373 (RAD50)
03450 Non-homologous end-joining
119860373 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
119860373 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcc03032
]
119860373 (RAD50)
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119860373 (RAD50)
DNA replication proteins [BR:
dcc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
119860373 (RAD50)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
119860373 (RAD50)
BRCA1-C complex
119860373 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
119860373 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
DUF2703
AAA_13
Motif
Other DBs
NCBI-GeneID:
119860373
NCBI-ProteinID:
XP_038269930
LinkDB
All DBs
Position
8:15560571..15600788
Genome browser
AA seq
1312 aa
AA seq
DB search
MSKIDKMSILGVRSFGIEDKDKQVITFFSPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGHSFVHDPKVANETDVRAQIRLQFRDVNGELTAVQRSMVCTQKGKKTEFKTLEGIITR
TKHGEKISLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGRALKQKFDEIF
SATRYIKALETLRQVRQKQSLRVKECQTELKYLKQNKEKAREIQDHLSNREAQLAASKEN
VKCIENQLDPLKNRLTEIEQNLAKVVRLDNEIKALDSRKRQMEKDNQDLQQKMEKVFQGT
DDQLRDMYQNHQRTVKEKERRLTDCQRELDRASKECQRFNREKSELLVEQGRLQLQADRH
QQDIRTRDSLIQTLAALLELDGFERTPFNERQINSFHQLVKERQEREAETASQLMREFAE
KETMKQKQIDEIRDKKTGLEKTIDLKSDIQNKKQLELKNVKYELNQLEESSDRILELDQE
LIKAECELDKAEKNSNVEALELEVQKLQNEKANLDKVLRKLDQEMEQLNLHTTTITQMDM
LRKDKVDKEEQIRKIKSRHIDELTSLLGYFPNKKQLEDWLHAKTREINQTRDKLAQLNKE
LASAEQNKNHISIELRKREEQLSNYEDKLFDVCGSQDFDSDLYKLQDEIEKTSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTESELQDVISDLQSKLRLAPDKLKSTESELK
RREKKRDEMMGLKPIRQTIAELKEKDIPDLRNKLQNVNRDIQRLKNDVEEQETLLGTVMP
EEESAKACLQDITLMERYQTDLRDVERKIAQQANKLHGVDLGRTVIQVSQEKQEKKHLWD
TVTGKIELNQKLKQDQQTQIQQLKSTVNELKAEKLQISSNMQHQQQLEDQTVELSTGVQS
LYREIKEAKDQLFPLEATLEKLQQERVDLINKKNTSNKITQEKINEIKEKVKNIHDYVKE
IEKYIQGGKEDYKKQKESELDEVKTQLADCEKQKEKISKEMGTIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEEERKQHLKEMGEMKVPQLKNERQRLEEKIEDLKRNHSLALGRQHG
FEEEIIRFKKELRESQFKDAEEKYREMMIVMRTTELVNRDLDMYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSISSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagattgataagatgagcatccttggagtgaggagttttgggatagaggacaaa
gacaaacaagttatcactttctttagtcctttaaccattttggtggggccaaatggtgca
ggaaaaacgactatcattgaatgccttaaatatatttccactggagatttccctccaggc
accaaaggacactcatttgttcatgatccaaaggttgctaatgaaacagatgtcagagct
cagattcgacttcagtttcgtgatgttaatggagagcttacagctgtccagcgatccatg
gtttgtactcagaaaggcaagaaaacagagtttaaaactcttgaaggtatcattaccaga
acaaagcatggggaaaagatcagtctcagttccaagtgtgcagaaattgaccgagagatg
atcagcgctcttggtgtttccaaatctgtgattaacaatgtcattttctgtcatcaagaa
gaatccaactggcccttaagtgagggaagggccctgaaacaaaaatttgatgagatcttc
tcagcaacaaggtatattaaagcattggaaactcttcgtcaggtacgtcagaagcaaagc
ttgcgggtaaaagagtgtcagacggaactgaaatatctaaaacagaataaagaaaaagca
cgtgaaattcaagatcatcttagtaatagggaagctcaactggctgcttctaaggaaaat
gtaaaatgtattgagaatcaacttgatcctctaaagaaccgtctcacagaaattgaacag
aatcttgcaaaagtagtgagacttgacaatgagattaaagctctggacagcaggaaaagg
cagatggaaaaagataaccaggatttgcaacagaagatggagaaggtttttcaaggaaca
gatgaccaactaagggatatgtaccagaatcatcagagaacagtaaaagagaaggaaagg
agattaacagactgtcaacgtgagctggatagagcaagcaaagagtgtcagagatttaac
agagagaaatcagaattacttgttgaacaaggtcgtcttcagctacaagcagatcgtcac
cagcaggacatcagaaccagggattcattaatccagactttggcagcactgttggaatta
gatggttttgaacgaacaccttttaatgaaaggcaaattaacagttttcaccagcttgtg
aaagagagacaagaaagagaagcagaaactgccagtcagttaatgagagaatttgcagaa
aaagaaacaatgaaacaaaaacagatagatgaaataagagataagaaaactggactggaa
aaaaccattgacctgaagtcagacattcaaaataagaaacagcttgaactgaagaatgtg
aaatatgaactgaatcagttggaggagtcttcagacaggattctggaactggatcaggaa
ctcatcaaggctgaatgtgaactagataaggctgagaagaacagcaatgtggaagctctt
gaattggaggtacaaaaacttcagaatgagaaagcaaacctggacaaggtccttcggaaa
ttggatcaagagatggaacagctaaacttgcataccacaacaatcacccaaatggatatg
ttgaggaaagacaaagtggacaaagaggagcagatcagaaaaataaaatctagacatatt
gatgaattgacctcattgctgggatattttcctaacaaaaaacagcttgaagattggctt
catgctaaaactagagagattaatcagacaagagacaagcttgcccaacttaacaaagaa
ctagcttcagcagaacaaaataaaaatcatatcagtattgagctaagaaaaagagaagag
cagttgtccaattatgaagacaaactttttgatgtttgtggaagccaagattttgatagt
gacctgtacaaacttcaggatgaaattgaaaagacttcaaagcagcgagctatgcttgct
ggagccacagcagtttattcacagtttattacacagctgacagatgagaaccagtcatgt
tgtccagtttgtcagagagtctttcaaacagaatcagaactgcaagatgtaattagcgat
ctgcagtccaagttacgtcttgctccagataaactgaagtcaacagaatctgagcttaaa
agaagagaaaagaagcgtgatgaaatgatggggcttaaaccaataaggcagaccatagct
gaacttaaagaaaaggacataccagacttaagaaacaagctacagaatgtaaacagagat
attcaacgcctaaagaatgatgtagaagaacaggaaactctcttaggtacagttatgccc
gaggaggaaagtgccaaagcatgtttacaagatataacacttatggaaaggtatcagact
gatttaagggatgttgaacgaaaaattgcccagcaggccaataagctgcacggggtagac
ttaggtcgaactgttatacaagtaagccaggaaaaacaagaaaaaaaacacctgtgggat
acagttactggtaaaattgagttaaatcaaaaacttaaacaggaccagcagactcagatc
cagcagctaaagagtacagtgaatgaacttaaagcagagaagctacaaatttccagtaat
atgcagcatcaacaacaactggaggatcagactgtagaattgtccactggcgttcagtct
ttatacagagagatcaaagaggcgaaggatcagctatttcctttggaagcaactttagaa
aaacttcagcaggagagagtagatctaatcaacaaaaagaacacaagtaacaaaataaca
caagagaagataaatgagatcaaagagaaagttaaaaatatccatgactatgtgaaagaa
attgagaaatatattcagggaggaaaagaagactataaaaagcaaaaagagtctgaactt
gatgaagtaaaaactcaactagctgactgtgagaaacagaaagaaaaaataagtaaagaa
atgggaacaattagacaagacattgatactcagaagatccaggaaagatggctagaggat
aaccttacattaagaaaaagaaatgaagagctaaaagaagttgaagaagaacgaaaacaa
catttgaaggagatgggggaaatgaaagttccacagctgaaaaatgaacgacaacgtctg
gaggagaaaatagaggatttgaaaagaaatcacagtttggcattaggtcggcagcatgga
tttgaggaagagatcattcggtttaagaaagagcttcgagaatctcagttcaaagatgct
gaggaaaagtacagagaaatgatgattgttatgagaacaacagagctggtaaacagggac
ctagacatgtactacaaggcacttgataaagcaataatgacatttcacagcatgaaaatg
gaagaaatcaacaaaatcattcgtgatctttggcgaagcacctacagagggcaagatatt
gaatatatagaaattcgttctgatgcagatgaaaatgtttcagcatctgataaaaggagg
agctacaattatagagtagtcatgataaaaggagatactgctttggacatgcgagggaga
tgcagtgctgggcaaaaggtgcttgcttccctcattattcgtcttgctctggcagaaaca
ttctgtctcaactgtggcattcttgcattggatgagcctactaccaatcttgatcgagag
aacattgagtctcttgcacatgctctggtggagataataaaaagccgctcacaacagcgc
aactttcagcttcttgtcataacacatgatgaagattttgtggagcttttgggccgttct
gaatatgtggagaaattctacaggataaaaaagaacattgaccagtgttctgagattgtg
aagtgcagtatcagttccttaggttcctatgttcattag
DBGET
integrated database retrieval system
