Dermochelys coriacea (leatherback sea turtle): 119860705
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Entry
119860705 CDS
T09064
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X2
KO
K16498
protocadherin delta 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119860705 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcc01009
]
119860705 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119860705 (PCDH1)
Protein phosphatases and associated proteins [BR:
dcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119860705 (PCDH1)
Cell adhesion molecules [BR:
dcc04515
]
Cadherins
Protocadherins
119860705 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Syndecan
MLANA
TMEM154
EphA2_TM
Mid2
Motif
Other DBs
NCBI-GeneID:
119860705
NCBI-ProteinID:
XP_038270683
LinkDB
All DBs
Position
8:39633477..39767903
Genome browser
AA seq
1099 aa
AA seq
DB search
MEKPEEPRTRRSPQATPVQRRMTWLAACLGLWLFLQLPILGAGTRVVYKVQEEQPPNTLI
GSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQSQFPGDHCFL
EFEVSITDLMMNSSPRLLEGQIEVLDINDNTPNFASPVITLAIPENTNIGALFPIPLAMD
RDAGANGVASYELLAGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTIKVQD
GGSPPRASSALLRITILDMNDNTPKFEKALYEAELSENSPVGHSVLQVKANDSDQGANAE
IDYSFHQATDMVRRLLHLDRTTGLITVQGPIDREDVNILKFSVLAKDKGANPKSARTQVV
VTVKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDQDEGENAVVTCVV
AGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEAVKEYIIEIVAVDSGNPPLSSTNSLKV
QVVDVNDNAPVFSQSHTEVAFPENNAPEDLVVEVSASDADSGSNAKLVYSLVMDPSSKGF
FSIDPDSGEIRVKTVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFML
SSYNFSVMENMPPLSPVGMVTVIDADKGDNARIQLSVEQDNGDFVIQNGTGTILSSISFD
REQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNASYKHILPYTSPGQ
QVSKVKAEDIDSGVNAELTYSITGGNPFELFQISSQSGDITLEKEILRKHHGLHRLVVRV
NDRGKPSRHGTALVHFYINETLANRTLLETLLGHSLDTPLDIDIAGDPEYERNKQRSNIL
FGVIAGIVAVTLVIVLVVLVCYCRQREAKSGYQAGKKETKDLYAPKQGNKNSKSKGKVKK
SKSPKPPKPSEDEDETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPL
PSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSMGSEQYSDYSYRTNPQKYTNKQLP
HRRVTFSAANQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPD
GSIGEMEHPENESPERNRL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccagaggagccgcgcactcggcgctccccgcaagcaacccctgtccagcgc
aggatgacgtggctggcagcctgcctgggcctgtggctcttcctgcagctccctatcctg
ggcgctgggacacgggtggtctacaaagtgcaggaggaacagccgcccaacacactcatt
gggagcttggctgccgactatggctttcctgacgtggggcatctctacaagttggaagtg
ggggccccctacctgcgtgtggatggcaagactggggacatttacaccacggagacctcc
attgaccgggagagcctgcgggagtgccagagccagttcccaggggaccactgcttcttg
gagttcgaggtgtccatcacggacctgatgatgaacagcagcccgcgcctgctggagggc
cagatcgaggtgctggacatcaacgacaacacgcccaacttcgcctcgcccgtcatcacg
ctggccattcctgagaacaccaacatcggggcactcttccccatccccctggccatggac
cgcgatgcaggagccaacggggttgcctcctatgagctcctggctgggcccgaggcgcag
gagctctttggcctacaggtggctgaggatcaggatgagaagcagccacagctgattgtc
atggggaacctggaccgagagcagtgggactcctatgacctgaccatcaaggtgcaggat
ggaggcagcccaccacgggcgagcagcgccctgctgcgcataaccatcctggacatgaac
gacaacacccccaagttcgagaaggccctgtacgaagcggagctctcagagaacagccct
gtggggcactccgtccttcaggtgaaagccaacgactcagatcagggtgccaatgccgag
attgactactccttccaccaggccacagacatggtgcgccgcctgctgcacctggacagg
accacgggcctcatcactgtgcaggggcccattgaccgggaggacgtcaatatcctcaag
ttctctgtcctggctaaggacaagggcgccaatcccaagagtgcccgcacccaggtggtg
gtgaccgtcaaggacatgaatgacaatgccccctccattgaaatccggggcattggcctt
gtcacccatcaggacggcatggccaacatctccgaagacgtgcctgtggagacggccgtg
gctctggtacaggtatctgaccaggatgagggtgagaacgctgtggtcacctgtgtggtt
gctggcgatgtcccgttccagctgagacaggccagtgagacgggcagtgacagcaagaag
aagtacttcctgcagaccaccacgccgctggactacgaggcggtaaaggagtacatcata
gagatcgtggctgtggactcggggaacccgcccctctccagcaccaactctctcaaggtg
caggtggtggatgtgaatgacaacgccccagtcttcagccaaagccacaccgaggtggcc
ttccccgagaacaatgcccctgaggacctggtggtggaggtgagcgccagcgacgctgac
agcggctccaatgccaagctggtttactctctggtcatggacccctcctccaagggcttt
ttctccatcgaccctgactcaggcgagatccgagtgaagacggtgctggaccgggagcag
agggagcgctacgaattcctagtggtggcagctgacaagggcagccccagtctcaagggc
actgcatctgtggccatcaatgtcatggacaggaatgacaacgaccccaagtttatgctg
agcagctacaacttctcagtgatggagaacatgcctccccttagtccggtgggcatggtg
acagtgattgatgctgacaagggcgacaacgcccgaatccagctgtcagtggagcaggac
aacggggactttgtcatccagaatggcactggcaccatcctctccagcatctcctttgac
cgggagcagcagagcacatacacctttcggctcaaagctgtggatggtggggaccctccc
agatccgcctacgtgggggtgaccatcaacgtgctggacgagaatgacaatgcccctttc
atcacctccccttccaatgcctcttacaagcacatcctgccctacaccagccccgggcag
caggtcagcaaggtcaaggccgaggacattgactcgggggtcaatgcagagctgacttac
agcatcacggggggtaaccccttcgagctgttccagatctcgtcgcagagcggggacatc
acgctggagaaggagatcctgcgcaagcaccatggcctgcaccgcttggtggtgcgggtc
aatgacaggggcaagccctcgcgccacggcaccgcactggtgcacttctacatcaatgag
accctggccaaccgcacgttgctggagaccctgctgggacacagcctggacacgccgctg
gacatcgacattgccggtgaccccgagtacgagcgcaacaagcagcgcagcaacatcctc
tttggcgtcattgccggcatcgtggccgtcaccctggtcattgtactggtggtgctggtg
tgctactgccggcagagggaggccaagagcggctaccaggcgggcaagaaagagaccaag
gacttgtatgcccccaagcagggcaacaagaacagcaagagcaagggcaaagtgaagaag
agcaagtcccccaaaccgcccaaaccatctgaggatgaggatgagacagggctgcagaag
tccctcaagttcaacctcatgaacgactctgtcagtgatagcccccgcatccacctgcct
ctcaactaccctcccgggagtccggacctggggcgccactaccgctccaactccccactg
ccctccatccagctgcagccccagtcaccctccgcctctaagaagcaccaggtggtgcag
gacctgcctgccactaacacctttgtgggcactggggacaacaactcaatgggctccgaa
cagtactctgactacagctaccgcaccaacccccagaaatacaccaacaagcagttacct
catcgccgagtgacattctctgcagctaatcaggcacaggacttgcaagatccctcacaa
catagttactatgacagtgggctagaagaatcagagacacccagcagcaagtcatcatca
gggccccggattgggccactagctcttcctgaggatcattatgagcgcaccacacctgac
ggtagtattggggagatggagcaccctgagaacgagtcccctgagcggaacaggctgtga
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