Dermochelys coriacea (leatherback sea turtle): 119861043
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Entry
119861043 CDS
T09064
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03013
Nucleocytoplasmic transport
dcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119861043 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
119861043 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119861043 (THOC2)
03041 Spliceosome [BR:
dcc03041
]
119861043 (THOC2)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119861043 (THOC2)
Spliceosome [BR:
dcc03041
]
Complex C
Other components
EJC/TREX
119861043 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119861043 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
119861043
NCBI-ProteinID:
XP_038271351
LinkDB
All DBs
Position
9
Genome browser
AA seq
1611 aa
AA seq
DB search
MAVAGALPAEWIKNWEKSGKSEFLQLCRTLSENKSHENVTFRDIQQALYELANHVVKGNL
KHDQASNVLSDVIEFRDDMSSILADVFCVLDIETSCLEEKSKRDHFTQLVLACLYLVSDT
VLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQ
DLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEP
QTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPVDNAILEEHKR
EIVEAKQIVRKLTMVVLSSEKTEEKEKEKDKEEEKTEKPPDNQKLGLLEALLKVGDWQHA
QSIMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISNLQNKRAPKQA
ESFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTSKKLNSEDRMVKFQSD
GNKQEEKEKMEILFSCLLNITDQVLLPSLTLMDCNACMSEELWGMFKTFPYQYRYRLYGQ
WKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQ
IQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFC
GAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGG
EQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLV
GKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHI
SSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWS
LTMYDLAVPHNSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQL
EHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQ
KTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRNIYEKECGN
YPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIV
LTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEF
HHKDPPARNAVAATVQNGPGGAGLPASLTINAAKLEESTAEETDKLKEKTQGAVKVINKA
ANATPKVTTSNGNSASNSKIIKEKDEKEKSGKEKDKEKKEKTPAAIPEAKALGKDGKDKP
KEERANKDDKTREIKEKTPKSDKEKEKAKKEEKTPKEEKSKTVVTNAESKFAAEKEREKE
PSREKDVAKDMKSKENIKGGEKLSVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSS
TVKDSLSELKDSSAKHYINHTVPALSKSKEREVEKKDLDKSRERSREREKKDEKDRKERK
RDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPHSNEKEKEKNKSKSSGKEKG
DSIKTEKMEKSSSGSKKESRHDKEKTEKKEKRDSAGGKEEKKHHKSSDKHR
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgggggcgctccctgccgagtggataaagaactgggagaaatcgggcaag
agcgagtttttgcaattatgccgcacgctcagtgaaaataaaagccatgaaaatgtgact
ttcagagatatccagcaggctttgtatgagcttgcaaatcacgttgtcaagggaaactta
aagcacgatcaagcttctaatgttctcagtgatgttatagaatttcgggatgacatgtcc
tccatccttgctgatgtattctgcgtattggatatcgaaacaagttgtttagaagaaaaa
agcaagagagatcattttacgcaactggtgttagcctgtttgtaccttgtttcagacacc
gtcctaaaggagcgtctggatccggaaacactggaatcattagggcttatcaagcagtct
cagcagtttaatcagaaatctgttaaaatcaagacaaaacttttttataaacaacagaaa
tttaacttattaagagaagagaatgaaggttatgcaaagctgattgctgaactggggcaa
gatttatccggcaacatcactagtgatttaatcctagaaaatatcaaatctttaatagga
tgttttaacttggatcccaacagagttttggatattatcttagaagtctatgaatgtaga
ccggaatatgatgatttctttgtacctttgatagaatcgtacatgtatatgtgtgaacct
caaactctgtgtcatatccttgggttcaaattcaaattctatcaggaaccaaatggtgaa
acaccttcctctttatacagagttgctgcagtacttttgcaacataatcttatagatttg
gaagatctttatgtacatcttcttccagtagataatgccattcttgaagaacacaaacga
gagattgtagaggctaaacaaattgttagaaaacttacaatggtggttttgtcctctgaa
aagactgaagagaaagagaaggaaaaggacaaggaagaggaaaaaactgaaaagccacct
gacaaccagaaacttggtttgttggaagctttgttaaaagttggtgattggcaacatgca
caaagtattatggatcaaatgcctccattttatgccacttcacacaagcctattgccatt
gccctttgccagcttgtacatgtgaccattgagcctttgtaccgcagagttggagtacct
aaaggggctaaagggtcaccaatttccaatttgcaaaataagagagccccaaaacaagca
gaaagttttgaagatttgaggaaggaagtgttcaacatgctttgttatcttggtcctcat
ctctcccatgatcccattttatttgcaaaagtggttcgcttaggaaaagcatttatgaaa
gaggttggaacttcgaagaaactgaacagtgaggacagaatggttaagtttcaatctgat
ggaaataaacaagaggaaaaagagaaaatggagatcttgtttagctgtttgttaaatatt
accgaccaagttttgctcccatctcttactctaatggactgcaatgcgtgcatgtcagag
gaactctggggaatgttcaaaacttttccataccagtaccgctatcgtctctatggacaa
tggaagaatgaaacatacaacagtcacccacttctagtgaaagttaaagctcaaactata
gacagagccaaatatatcatgaagcgtctaaccaaggaaaatgtgaagccttctggaaga
caaattgggaagctaagccatagcaatccaacaattttatttgattatattttgtcacaa
atacaaaaatatgataatttaattacacctgttgttgattccttgaaatacctcacttca
ctgaactatgacgtcttggcatactgcatcattgaagctctggcaaatcccgagaaggag
agaatgaaacatgatgacactacaatttctagctggctgcagagtctagctagtttttgt
ggtgcagttttccgaaaatatccgattgaacttgctggtctactgcagtatgtagcaaac
caactaaaggctggaaaaagctttgacttgctcattttaaaagaggtggtacaaaaaatg
gctggaatagaaataacagaagaaatgacaatggagcagctagaagccatgactggtgga
gaacagctaaaagctgagggtggatattttgggcagatcagaaacactaaaaaatcttca
cagagattaaaagatgcattgcttgaccatgatctggcccttccactgtgcctgcttatg
gctcaacagcgaaatggtgtgatctttcaggagggaggtgagaaacatttgaagctggtg
gggaagctgtatgatcagtgccatgatactctggtacagtttggtggatttttagcctcc
aatctaagtacagaggattacattaagcgagtgccttctattgatgttctctgtaatgag
tttcacacgccccatgatgctgcatttttcctctccaggcctatgtatgcacatcatatt
tcatcaaaatatgatgaacttaaaaaagcagagaagggaaacaaacagcagcacaaagtt
cataagtacatcacatcatgcgagctagtgatggctcctgttcatgatgctgtgatctcc
ttgcaccttcctaaagtttgggatgacatcagtcctcagttctatgctacattttggtct
ctgacaatgtatgaccttgctgttccacataatagctacgacagagaagtcaataaactt
aaagtccagatgaaagctatagatgacaatcaggaaatgcctccaaataaaaagaaaaaa
gaaaaagaacgttgtacagcccttcaggacaagcttcttgaagaggagaaaaagcagttg
gagcatgtgcagagggttctacagagactgaaactggaaaaggataactggcttctggca
aaatcaaccaaaaatgagactatcacaaaatttctacagttgtgtatatttcctcgctgc
attttttctgcaatcgatgctgtttactgtgctcactttgtagaactggtgcatcaacag
aaaacgcccaatttttccacacttctctgttatgatagagttttctcagatataatctat
acagtagcaagttgcactgaaaatgaagctagtagatatggcaggtttctgtgctgtatg
ctagagactgtgactaggtggcacagtgatagaaacatatatgaaaaggaatgtggaaac
tatccaggcttccttaccatattacgggcaactggatttgatggtgggaacaaagctgat
cagttagattatgagaactttcgacatgtggtacacaaatggcactataaattaactaag
gcttctgtacactgccttgaaacaggcgaatatacacatatcagaaatatcctgattgtg
ctgaccaaaatccttccatggtatccaaaagttctgaacctgggtcaggccttggaaaga
agagtacataagatctgtcaggaagagaaagagaagagacctgatctatatgcgttagct
atgggctattctgggcaattgaaaagtagaaagccttacatggtaccggaaaatgaattc
catcacaaagacccacctgccaggaatgctgtagctgcaacagtgcaaaatgggccaggt
ggtgctgggctgcctgcatcactcacaataaatgcagctaaactggaagaaagcactgct
gaggagactgacaaactaaaggagaaaactcagggtgcagtgaaagttattaataaagcc
gccaatgcaacaccaaaagtgacgacaagcaatggaaacagtgcttccaacagcaaaatt
attaaagaaaaagatgagaaagaaaaaagtgggaaggaaaaagataaagaaaaaaaagaa
aagactccggctgccattccagaggccaaggcacttggaaaggatggaaaagataaacca
aaggaagaacgggcaaacaaagatgataaaacaagagagatcaaggaaaaaacaccaaaa
tctgacaaagagaaggagaaagccaagaaagaagaaaaaacaccaaaagaggaaaaatcc
aagacagttgttaccaacgctgagtcaaagttcgctgcagaaaaggagagagaaaaggag
ccatccagagaaaaagatgtagcgaaggatatgaaatccaaggaaaatattaaaggagga
gaaaaattgtcagtagctgggtccttgaagtcacctgttccccgatcagaaacatcagag
tctgaaagggaacaaaaacgtcgcaaagttgatacccattcttctccatcacattcctca
acagtaaaggacagcctcagcgaactcaaggactcttcagcaaagcactacattaaccat
actgttcctgcactgtccaagagtaaggagagagaagtggagaagaaagatttggacaag
tccagggaaagatccagagagagagagaagaaagatgaaaaggataggaaagagcgaaaa
agggatcattcaaatagtgaccgggaggtgccacaggactcaaccaaaaggcgtaaagag
gaaaatggaacaactggttcttcaaaacatagtaaaagtgaaagtccatctgattctcct
cattcaaatgagaaggaaaaggagaagaataaatcaaaatcttcaggcaaagaaaaaggt
gattcaatcaaaactgaaaagatggagaaaagttcctctggtagcaaaaaggagtctaga
catgataaagaaaaaacagaaaaaaaggaaaaacgggacagtgctggagggaaggaagaa
aagaaacatcataaatcttcagacaagcacagataa
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integrated database retrieval system
