Dermochelys coriacea (leatherback sea turtle): 119861287
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Entry
119861287 CDS
T09064
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119861287 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119861287 (TRIP12)
Enzymes [BR:
dcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119861287 (TRIP12)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
HECT type E3
119861287 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
119861287
NCBI-ProteinID:
XP_038272184
LinkDB
All DBs
Position
9:33655954..33831141
Genome browser
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDTVGGRSHLGQAKHKAHSPPESKKSISKTPKVQ
SNTTSEQSTGHFSKRGCSSSAVIIPQEDPDKVSTSERQKTGQVPKRDNSRGVKRSASPDY
NRTNSPSSAKKPRALQYTETFSETNKPHTKSKKRPLDQEQQSKSAQLPSTSKAHTRKGGA
TGSSRSQKRKRTESSSCIKSGTAVESTGVEERSAKPSKLASKSATSAKAGCSNITDSSSS
ASTSSSSSAVASVSSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEPSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANSNASGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKA
CTNGSGTLGTTTTISTGTATSASNATADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFNSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDVRL
KRFLRVFFSSPPPEEESLGRLEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQF
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVSNPLEVYLVFTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYENAVCKEIIPTTEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFNIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLNMNGCS
VEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFE
SVFPLSHLQYFYPEELDQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSL
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgacacagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtaaaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccacgggacacttttctaaaagaggctgtagttcatct
gcagttataataccacaagaagacccagacaaagtcagtacttcagaaaggcaaaaaacg
gggcaggtgcctaagagagacaattctcgaggagtgaaacgcagtgctagcccagattat
aacaggaccaattcccctagttctgctaaaaaacccagagcacttcaatatactgaaact
ttctcggaaacaaacaagccacatactaaatctaagaaaagacccttagaccaagaacag
cagtcgaaatctgcacaattgccatcaacgagcaaggctcataccagaaagggtggagct
accggtagctcccgaagtcagaaaaggaaaaggacagagagttcatcttgtataaagagt
ggtacagcagttgaatcaactggcgttgaagagaggtctgcaaaacccagcaaactggct
tcaaaatcagcgacctcagccaaagctgggtgtagcaacatcactgattcatcgtcttca
gcttctacatcctcctcctcttctgctgttgcctctgtttcttccactgttcctcagggt
gccagagtaaaacaaggaaaagaccagagcaaggcaaggcgttcccgttctgcatctagt
cccagtcccagaaggagtagccgagataaagaaccaagtaaaacaggtggctcttcaaag
tttgactgggccgctcgcttcagcccaaaagttagcctgcctaaaacaaaactgtctcta
ccaggctcctcaaagtcagagacctcaaaacctggaccttcaggattacaggctaaacta
gcaagtttaagaaaatctacgaagaagcgcagcgaatcaccacctgcagagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagtacgagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggaaaaaatggctgatcct
gataacaaccaggatggagttaattcttcagctgcacgtacagatgaggctccacaagga
gcagcagcatctagttctgttgcgggggctgtaggcatgaccacttctggagaaagtgag
tcagatgattctgagatgggaaggctacaagctctgttagaggctaggggtcttcctcct
cacctatttggccctcttggtcctcggatgtcacagcttttccacaggacaattggaagt
ggagctagttctaaagcccaacagcttcttcaggggctccaagccactgatgaaagtcag
cagctacaggcagtaattgagatgtgtcagttgttggtcatggggaatgaagaaacatta
ggtggatttccagtcaaaagtgttgtaccagctttgataacattgctgcagatggagcac
aactttgatattatgaaccatgcttgtcgagccttaacctacatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtctttttggaaaagctgcaagttatt
cagtgtattgatgtggcagagcaggcattgactgccctggagatgttatcacgcagacat
agtaaagctattctgcaggcaggtggattggcagactgtctgctgtatctggagttcttc
agcataaatgcccagaggaatgcactagctattgctgccaactgctgccagagcatcaca
cctgatgagtttcactttgttgcagattctctgccactgcttacacaaaggctaacccat
caggacaaaaagtcagtagaaagcacttgtctctgttttgcacggctggtggacaacttc
caacatgaggagaatttgcttcagcaggttgcctctaaggatttgctcacaaatattcag
caactcttggtagtgactcctcccatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgtcctacgctagcagttcaacttatgaagcaaaat
attgcagaaacacttcacttccttctttgtggagcctcaaatgggagttgtcaagaacaa
attgatcttgttccacgaagtcctcaagaactttatgagcttacttctcttatatgtgaa
ctgatgccttgcctgcctaaagaaggaatctttgctgttgatactatgctaaagaaagga
aatgcacaaaacacagatggggcaatttggcagtggcgagatgacaggggtctgtggcat
ccctacaacaggattgatagccggataattgaggcagctcatcaggttggggaggatgag
ataagtctgtctaccctgggacgtgtttatactattgacttcaattctatgcagcaaatc
aatgaagacactggaacagcacgtgctattcagagaaaacctaaccccttagccaatagt
aatgccagtggacattcagaactaaagaaggatgatgctcgagcacagctaatgaaagag
gacccagaactggctaaatcctttattaaaacattgtttggtgttctttatgaagtgtac
agctcttccgctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtgctgaaaaatcatgccgtttcaagtcat
attgcctccatgctgtcaagtcaagaccttaagatagtagttggagcccttcagatggca
gagatcttaatgcaaaaattacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaaaaatctagcagaatctgaggctttgctgacgagcccaccaaaagca
tgcactaatggatcaggaactctgggtaccactacaacaataagcactgggacagccacc
tctgccagtaatgcaactgcagatttggggtctcccagcttacaacacagccgggaagac
tctctggatctgagtccacagggccgactaagtgatgttttaaagagaaaacgactgcca
aaacgtgggcccagaaggccgaagtattcacctccaagagatgacgacaaagtagacaat
caagctaaaagccctacaactactcagtctcctaaatcttccttcttggcaagcttgaat
cctaaaacttgggggagattaagcacacagtccaatagcaacaacattgaaccagcacgc
acagcaggagtcagtggtcttgcaagggctgcctcaaaggataccatatccaacaacaga
gagaaaattaagggttggattaaggaacaagcccataaatttgtggagcgttattttaac
tctgagaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatccgtagc
atagtctctgagtctgatgtctcctcgttcgaaatccagcatagtgggtttgttaaacag
ctgttgctttacttgacatctaaaagtgaaaaagatgctgtaagcagggatgtcagatta
aaaaggttccttcgtgtgtttttttcttctccacctcctgaagaagaatctcttggaaga
ttagagccagtaggaaatgcacccttgttggcattagtccataaaatgaacaactgtctc
agtcagatggagcagtttcctgtcaaagtgcatgattttccaagtggaaatggaacaggg
agcagtttttctctcaacagaggatcccaagctttaaaatttttcaacacacatcaatta
aaatgccagctgcaaagacatccagattgtgctaacgtgaaacagtggaagggtggacct
gtgaagatagatcccctggctttggtgcaagccattgaaagataccttgtagttagagga
tatggaagagtgagagaagatgatgaggacagtgatgatgatggatcagatgaagaaata
gatgaatctttggctgctcagttcttaaattcagggaatgtgaggcacagactgcagttt
tacattggagatcacttgctgccatataatatgactgtgtatcaagcagttagacagttc
agtttacaagctgaagaggagagggaatccacagatgatgaaagcaaccctttgggaaga
gctggaatttggactaagacgcacactatatggtacaaaccagtgcgagaggatgaagat
ggtaataaggactgtgttggtggtaaaagaggaagggcacaaactgctcccacaaaaact
tcccctagaaattcaaaaaagcatgatgagttgtggcatgatggtgtgtgcccttcggtg
tcaaatcctttagaagtttaccttgtatttacaccacctgaaaatataacatttgaagac
ccctcgttagatgttatcctccttttgagagttttacatgctatcagtcgatattggtat
tacctgtatgaaaatgcagtttgcaaggagattattcccaccacagaatttatcaacagt
aaactgacagcaaaagctaacaggcagcttcaggatcctttggtaatcatgacgggaaac
ataccaacttggctgacagagcttggaaaaacatgcccatttttctttccatttgacacc
cggcaaatgctattttatgtaactgcttttgatcgagatcgagcaatgcagagattacta
gataccaatccagaaatcaatcagtccgattctcaggacagcagagtggcgccgcgactg
gacaggaaaaaacgcactgtgaatagagaagagctgttgaaacaggcagaatctgtgatg
caagatctaggcagttcgagagctatgttggaaatccagtatgagaatgaagttggcaca
ggtctaggacctacactggagttttatgcacttgtatctcaggaactacagagagcagac
ttaggcctctggagaggagaagaagtaactctatccaatccaaaaggaagtcaagaaggc
acaaagtatattcataatctccaaggcctatttgctcttccttttggtagaacagctaaa
ccagctcacattgcaaaggttaaaatgaagttccgttttctgggaaaactaatggctaaa
gcgatcatggatttcagattggtggaccttccccttggccttcctttttacaaatggatg
ttacgacaggaaacttccttaacttcacacgacttgtttaatatcgatccagtggtagct
agatcagtatatcatcttgaagatatagtgagacagaagaaaagacttgaacaggacaaa
tcacagaccaaagaaagtttacagtatgcattggagaccctcaatatgaatggctgctca
gtggaagatctaggactggatttcacattacctgggtttcccaatatagagctgaaaaaa
gggggaaaagatatacctgtcaccatccacaatttagaagagtatctcagactggttata
ttctgggcactaaatgaaggtgtttccagacaatttgactcattcagagatggatttgaa
tcagtcttccccctcagtcatcttcagtacttctatcctgaagagttggatcagctcctg
tgtggcagtaaaacagacacttgggatgcaaagacattaatggaatgctgcaggccagat
catggttatacacatgacagtcgagctgtgaagtacctgtttgaaattcttagtagtctt
gatagtgagcaacaaagactatttctccaatttgtgaccggtagccctagactgccagta
ggaggctttcgaagtttgaatcctccactgacaattgtacgcaagacatttgagtctaca
gaaaatccagatgacttcttgccctcagtaatgacttgtgtgaattatctcaaattgccg
gactattcaagtattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
