Dermochelys coriacea (leatherback sea turtle): 119861306
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Entry
119861306 CDS
T09064
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X2
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119861306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119861306
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119861306
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
119861306
NCBI-ProteinID:
XP_038272233
LinkDB
All DBs
Position
9:82985190..83018632
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AA seq
556 aa
AA seq
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MATELEPPASGAAPLEAEEDEEHWLYGDDTTGKQEDGPIAGHAESSHPLQDAPQESRPVT
SEDREMSQHAPPSGEDDEEDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYG
TSSSAKLQPKGIDLDATGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKA
YCEKQRRLQLGLDPSPPISSENKITVQQGRTGNSEKEPENNVIKTEFKTDFVALIGGRMK
AGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGNKPQPPQQPQQP
SQPQQPPQQQPFVPPAGPPPPPIAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLF
PPPLAPPPALLIPTLDGQPAGYNNRQPPPFGYSSADSGFISYPPISTSHTPWVTTVDKGT
SSSSSSHWEYSSSRRERERERERERERDRDRTPTTSEYNNDDERYRYYSRERSYDFERDY
RRSRDRSREREDRHRERRHREKEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKE
ASDDGVAEGDEQDAKE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccccccgcctcgggcgcggcgccgctggaggcggaggaggac
gaggagcactggttgtacggggatgacaccactggtaagcaagaagatggaccaattgct
ggacatgcagaatcttctcatcctttgcaagatgctcctcaggagagccggcctgtcacc
agtgaagaccgagagatgtcacaacatgcccctccaagtggtgaagatgatgaggaagac
agtgatagcgacagtgatgatgatgatgtgaaagttaccattggcaacattaaaacagga
gcaccatcctacatggggactcctatgaatctgaacttaaaaacaggtagaggctatgga
acctcctcttcagccaagttgcagcccaaaggtattgatctagatgccacagggaatata
aatggattgcctgtaatagaagtggatttagattcgtttgaagacaaaccgtggaggaaa
ccaggtgctgacctttcggattactttaattatggattcaatgaagaaacatggaaagct
tattgtgaaaaacagcgacggcttcagcttggactggatccctctccacctatcagcagt
gagaataagatcacagttcagcaaggaaggacaggaaattcagagaaagaaccagagaac
aacgttatcaaaacggaattcaaaacggactttgtggctctgataggaggacggatgaag
gctgggcctccaccaaataggaagctgggtgggacaattgatgtgattggtggacaggca
ggcactattaggagggtagaaggaagacgccgcgataaacacgcctcagaggaaaatccc
attcaggttcttggagatcatggaaataagccacaacccccgcagcagccccagcaacca
tcacagccacaacagccacctcagcaacagccgtttgtaccaccagcaggtcccccacct
cccccaattgctgggccacccccaccacactttctccaccctccccctccagttacttct
gtcccacctcctctgcatcctccaggcttgccaccaccaggtcccattccagggctgttc
cctccacctctggctcctccaccagctctcctcattccaacacttgatggccaacctgcc
ggctacaataacaggcagcctccaccatttggatacagctctgcagattctggtttcatc
agctaccctccgatttccacgtctcacacgccctgggtgacgacagtggataagggcaca
agcagctccagcagcagccactgggagtactccagctcaaggcgtgagagagaaagggag
cgggaaagggaaagggagagagacagagaccggactccaaccaccagtgaatacaacaat
gacgacgagcgatatcgctactacagtcgagagcgaagttatgattttgagcgggattat
cgcagaagtagagatcggagcagagagcgggaggatcgccaccgggagcgcaggcacaga
gagaaggaggagagcagtaaacataagtcttcaagacgtaagcagcacgagagtgaagag
ggtgaaagccaccggcgccacaagcacaaaaagaacaagcgcagcaaagaggagaaggag
gccagtgatgacggcgtcgcagagggagatgaacaagatgctaaggagtaa
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