Dermochelys coriacea (leatherback sea turtle): 119861488
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Entry
119861488 CDS
T09064
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119861488 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcc01009
]
119861488 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119861488 (PCDH20)
Protein phosphatases and associated proteins [BR:
dcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119861488 (PCDH20)
Cell adhesion molecules [BR:
dcc04515
]
Cadherins
Protocadherins
119861488 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
119861488
NCBI-ProteinID:
XP_038272616
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All DBs
Position
1:complement(68975370..68984795)
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AA seq
1047 aa
AA seq
DB search
MHRGGGGARGFLGTGLPLGRERPRAPHGAQPSSTPRGSPPQQPGGAGASGSPRAPPRPAP
EPRVRCVTIGRSPPSHLHAGKGRGGAGRGRGRVFRCLPRRSDGTAPSAGMSYHGAGRRSR
ALGASWLPRSRHRPLEMGHLRSAGRATSHRKLQHLFLFLLFIGPFNCFASYSRATELFYS
LNEGLPAGVLIGSLAQDLRLHGVAAEGPPTRRGEPALSFSLASQGLGGQYVSLDNRSGEL
HTSALQIDRETLCLETGAGSPAFLPAPSSEPCLLLLDVLVLPQEHFRLVKVKIAIRDIND
NAPHFPVPNMRLWVPENAPVDTRLAIEHPALDPDLGTNAVQTYRLQDDYGVFTLDVEENE
SGERTPYLIVMGALDREAREEYVTLIIAEDGGTPPLLGSATLTIGISDINDNCPQFSDSQ
FNVTIYGNSSAGTHVATIHAVDLDLGSNAQISYSYSQKVPQPSRDLFHLDESTGAIKLSS
KIDGDAPRLHRLTILANGPGCIPAVITVLVSIIKVMLRPPEVIPRFIANEVEGVVYLKEL
EPVNTPIAFFTIKDPDEKYKVDCFLDGNGPFKLSPYKPYNNEYLLETTRPLDYEVQQLYE
ISVVAWNSEGFHVNKIIKVKVLDDNDNSPVFPQQLIELSIEENNAPNVFLTKLHATDADS
GERGKVSYFLGPDAPSYFSLDKTTGVLTVSTQLDREEKEKYRYTVKAIDSGLPPRESIAT
VIITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDADAEQNGWVALSVVNGSDI
FVIDTGKGVLRAKVSLDREQQSSYVLWVEAVDGGDPALSSTAKITILLLDINDNPPLVLF
PQSNTSYLLVLPSTLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNI
TLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDIN
IEEKEPQISIEPTHKKMESPSCVPTLVALSIISLGSITLVTGMGIYICLWKGKKHHRADK
NLEVQIPLNGRIDLHMLEKKPMEISNI
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggggcgggggcggcgcccgcggtttcctcgggacgggtttgccgctggggagg
gagaggccccgcgccccgcacggtgctcagccgagttccacgccgcggggctccccgcca
cagcagcccggaggagcgggcgccagcggctcccctcgcgcgccgccccgccccgccccg
gagcctcgagtccgctgtgtgacgattggccgaagtcctcccagtcatttgcatgcagga
aaggggcggggcggggcggggcgggggagggggcgtgtcttccgctgcctgccccgccgg
agcgacgggactgccccttcagcgggaatgagctaccacggggcgggccggcgctcgcga
gccctaggagcaagctggcttccgaggagcaggcaccggccgctggagatggggcacctc
cgcagcgccgggcgcgccaccagccacaggaagctgcagcatttgttccttttcctgctc
ttcattggtcctttcaactgcttcgcaagttacagccgcgccaccgagctcttctacagc
ctcaacgaggggctgccggccggggtgctcatcgggagcctggcacaggacctgcggcta
catggagtggctgcggaggggccgccaacccgtcgcggggagcctgcactctccttcagc
ctggcctcccaggggctgggcggccagtacgtgagcctggacaaccgttcaggggagctg
cacacttcagccctgcagatcgaccgcgagacactgtgcctggaaactggcgccggctca
cctgcctttctgccggcgccatcctcagagccctgcctgttgctgctggatgtgctggtg
ctgccccaggagcacttccgcctggtgaaggttaagattgccatccgtgatatcaatgac
aatgcgccacacttccccgtgcccaacatgcgcctctgggtgcctgagaacgcccccgtc
gacacccgcctggccatagagcacccggccctcgaccctgacctgggtaccaatgcggtc
cagacctaccgccttcaggatgactatggggtcttcaccctggatgtggaggagaatgag
agcggggagaggaccccctacctgatcgttatgggggctctggacagggaggccagagag
gaatatgtcaccctcatcatcgcagaggatggggggaccccaccgttgctgggcagtgcc
accctcaccattggcatcagcgacatcaatgacaactgcccccagttcagcgactcccaa
ttcaatgtcaccatctatgggaattccagtgcagggacacatgtggccaccatccatgca
gttgacctggacctgggatccaatgcccagatctcttactcttacagtcaaaaagtcccc
cagccatcaagagacttgttccacctggacgaaagtacaggagccatcaagctctccagt
aaaatcgacggtgatgctccccggctccatagattgactatattggccaatggtcctggt
tgtatccctgctgtgatcactgtgctggtgtccatcatcaaagtcatgttgagaccccct
gaagtgatccctcgttttatagctaatgaagtagaaggtgtggtttacttgaaagaattg
gagcctgttaacacaccgatagcattttttaccataaaagacccagatgaaaaatataaa
gtggattgctttttggatggcaatgggccattcaaactgtcaccatacaaaccatacaac
aatgaatatttattagagactacaaggcctttagactacgaggtgcagcagctctatgaa
atatcagtggttgcatggaactcagagggatttcatgtaaacaagataattaaagtgaag
gttctggacgataacgacaactcaccagttttccctcaacaactgatagaattatctatt
gaagaaaataatgctcccaatgtttttttgaccaaattgcatgcaacggatgctgacagt
ggagagagagggaaagtctcctattttctagggcctgatgccccttcatatttttcttta
gataaaactacaggtgttcttacagtttccactcagctggacagagaagaaaaagagaaa
tacagatatactgttaaagcaatagattctggattgcctcccagagaatcgatagcaact
gtcatcatcacagtgttggataaaaatgacaatagtcccagatttatcaataaggatttc
agtttttttgtaccagaaaactttcctggttttggggaaattggagttatcagtgttaca
gatgctgatgcagagcaaaatggatgggtagccctttcagttgtaaatggaagtgatatt
tttgtgatagatactggcaaaggagttttgagagctaaggtctccctcgacagggagcag
caaagttcctatgtcttgtgggttgaagctgttgatggaggtgaccctgccctgtcttct
actgccaaaataactatccttcttctggacattaatgataaccccccactggtcttgttt
cctcagtctaatacgtcttatttgttggtacttccttctactcttcctggttctcccatc
acagaagtctatgctgtagataaagacactggcatgaatgctgtcatagcttacagcatc
ataggtagaagaggtccacgacctgaatcatttaggattgaccctaaaactggtaatatc
accttggaagagtcactgatgcagaatgactatggtctctaccggctactggtaaaagtt
agcgatcatggctatccagagcccctgcattccacagtcatggtgaacctttttgtcaat
gacacagtgagcaatgagagctatattgaaagtttgttaagaaaggagcctgacattaat
atagaggaaaaagagccacaaatatctatagagcctacgcataagaaaatggagtcacca
tcttgcgtgcctaccttagtagccctgtcaataataagcttggggtcaatcactttagta
actgggatgggcatttacatctgtttatggaaagggaaaaagcatcacagagcagataaa
aatttggaagtacaaatcccactaaatggaagaattgaccttcatatgttggagaagaaa
ccaatggagatttctaatatttga
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integrated database retrieval system
