Dermochelys coriacea (leatherback sea turtle): 119861652
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Entry
119861652 CDS
T09064
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119861652 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcc01009
]
119861652 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119861652 (PCDH11X)
Protein phosphatases and associated proteins [BR:
dcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119861652 (PCDH11X)
Cell adhesion molecules [BR:
dcc04515
]
Cadherins
Protocadherins
119861652 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
K319L-like_PKD
TMEM154
Cadherin_4
DUF6249
Motif
Other DBs
NCBI-GeneID:
119861652
NCBI-ProteinID:
XP_038272948
LinkDB
All DBs
Position
9:complement(70290137..71273575)
Genome browser
AA seq
1242 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GTPPRSSTAILQVTVTDVNDNRPVFKENDIEVSIPENAPVGTSVSQLHATDADLGSNAQI
HFFFSNQISSLAKRHFALDNTTGLITIKEPLDREVSPVHKLTVLASDGSSTPSRATVTVN
ITDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKVALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPVIGLSIPENNAPGTQLTKISATDADSGRNAEISYMLSSDAPPIFNLDRRTGVLTA
VRKLDREKQDKYSFTVLARDNGMPPLQTNTTVTLSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRENFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRVQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYDLIPTATNPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITADHGLHRLVVKVNDLGQPESLYT
IALVHLFVNETITNGSYVQEMVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPAHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVTECSCQGGFKTPGP
IHTRQHTKEMGRPQSPLKETSLESWTQPQSQRRVTFHLPDGSQESCSDSGLGDHEPSSSA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNSPLPSFGFQQGWGRGTRPEGRHALGRPKDDTDKSQGGPQPQF
YNTCERHCTSEDPVKVIPLANFTPSQQAPVSGNNTFIHEHQL
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagttttattagcctgcattgtatttcaa
tctggtgcccaagagaagaattatactgtgagggaagaactgccggaaaatgtcctgatt
ggcaatttgctcaaggatctgaacttgacactggacccggatgtgcccctttcatcacct
cttcagttcaagcttgtatataagactggtgatgtgccattagtccgggtggaggaaaac
actggtgagatattcacgactgcaaaccgtatagaccgggagaagctgtgctctggcatt
tttagtgagaaccgctgcttttatgaggtggaggtagcagttttgcctgatgaagtcttc
agactggtcaagatcagattcctgatagaggatatcaatgacaatgctcccctttttccc
tcaacagtcattaacatctccatccctgagaacacagccattaattcccgctattctgtc
ccttcggccatcgatcctgacattggagtgaatggcattcagcattatgaacttcttaag
cccaaaacagcaccgaaaaggacatttggatccattacgaatgatcagggtcaaaatgta
tttggacttgatataattgaaacacctgagggagataagtggccacagttgattgttcag
cagatcctggacagggagcagaaagacacatatgtgatgaagattaaagttgaagatggt
ggaacacctcccagatccagtacagccatcctacaagtaacggttactgatgtgaatgac
aatcgcccagtctttaaggaaaatgacattgaagttagcattccagaaaatgctcctgtg
ggcacctcagtttctcagctccatgccactgatgctgatctgggctcaaatgcacagatc
cacttctttttcagcaatcagatctccagtctggctaaaaggcactttgccttagataac
actactggcctcatcacaattaaggaaccactggacagggaggtgtcacccgtacacaag
ttaactgttttggcaagtgatggcagctcaactccatcaagagcaacagtgacagtaaat
atcacagatattaacgataatgtcccatccatagacacaagatacatcatcaatccagtg
aatgggactgtgctcctgtctgagaaagcacctctcaatacaaaagttgccctgattaca
gtaatggacaaggatgctgatctgaatggaaaagttacctgcttcacagaccatgatgtc
ccttttaggttaaagccagtgtttgataatcagtttctattggagactgccacatttcta
gactatgaggctacgcgagaatatgccattaaaatagtggcctctgattcagggaaacct
cccttaaatcagtctgcaatgctgctgatcaaaatcaaagatgaaaatgacaatgcccca
gttttcacacagcctgtcataggactctccattcctgagaacaatgctcctggtacccag
ctgaccaagatcagtgccacagatgcagacagcggacgcaatgctgagatcagctatatg
ctgagttcagatgcaccccccattttcaacctggatcgacgcacaggagttctgacagca
gtgagaaagctggacagggaaaagcaggacaagtactccttcactgtactggctagggat
aatgggatgccaccattgcagaccaatactactgtgacactatcagttctggaccagaat
gacaacagccctgcttttacccacaatgaatacaatttctatgtgccagaaaacctgccc
atgtatggcacagtggggctcatcacagttactgatgctgactctggagagaatgctgcg
gttactctctctatattaaatggcagagagaatttcattatcgatccacttactggtgta
ataagacctaatattacatttgatagagagcaacaaggttcttacactttccaggtgaaa
gctgttgatggaggaagagtgcaacgctcttccactgccaaagtgaccataaatgtagtt
gatgtgaatgacaacaggccggttttcgtcatcccttcatctaactattcctatgacttg
attcccacagccaccaatccagggtctgtggtgactaaagtctttgcagttgacaatgat
acagggatgaatgcagagctccgctacagcattataggtgggaactctagaggtttgttt
acaatcgatcagttaacaggcaacattactttgaaagagaaggtaatcacagcagatcat
ggcttacataggctggtggtaaaagtcaatgatttaggacagccagagtctctttatacc
atagcactggtgcatttatttgtgaatgaaaccatcaccaatggttcatatgtgcaggag
atggtgcgcagaaatatggaaacaccagtgggccagaatgttggggatggtgagataacc
ccacagaccaatgactatgtcaaaatcatcattgctataattgcaggcaccatgacagtc
atcctggtcatttttgtcactgctttggtacgatgccgccagacaccccggcacaaggtt
gtccaaaaaagcaagcagagtggggaatgggtctccccgaaccaggagaaccgacagatc
aagaagaagaagaagaaaaagaagcgctctcctaaaagcctccttctcaactttgtgaca
attgaagaatctaagcccgacgatcctgcccatgagcatataaatggcactttagacatt
cccgtagagctagaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaagcctgacagcccagatttagcaaagcattacaagtctgcctctccacagcccacc
tttcaaattaaacccgagactcctgtaccccctaagaagcaccatgtcattcaggaactg
cctctggataacacctttgtagtgggttgtgactcgctctccaagtgctcctcaagcagc
tcggacccgtatagtgtcactgaatgcagctgtcaaggtggcttcaagaccccaggcccc
atccacaccagacagcacacaaaagagatgggaagaccccagagccctttgaaagagaca
agcctggaatcatggactcagccccagtcgcaacgccgtgtcacgtttcacctaccagac
ggctcccaggaaagctgcagtgacagtgggcttggagaccatgaacccagcagcagtgct
agcacatcgcatcctctgccccttggtttcccccaagaggagtactatgaacaggcttcg
cccaacagtcggacagaaggagatggcaattcggacccggagtccactattgaagttaat
ctccaaaaagcccttgctgaagcttctgaaacctgcacacaagaatgtcttatcctaggc
cattctgacaactgctggatgccaccttctttgacacagtaccaacaatccaactctcct
ttgccatcatttggcttccagcaaggatggggtcgaggaaccagacctgagggaagacac
gcgcttggaaggccgaaggatgatactgacaaaagccaaggtggtccacagccccagttc
tacaacacctgtgaaagacactgtaccagtgaagatccagtcaaagtgattcccctggca
aacttcactccatcgcaacaggcaccagtgtctgggaataacacctttatacatgagcac
cagttataa
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integrated database retrieval system
