Dermochelys coriacea (leatherback sea turtle): 119862249
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Entry
119862249 CDS
T09064
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X2
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcc01002
]
119862249 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119862249 (USP42)
Enzymes [BR:
dcc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119862249 (USP42)
Peptidases and inhibitors [BR:
dcc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119862249 (USP42)
Ubiquitin system [BR:
dcc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119862249 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Ntox14
Motif
Other DBs
NCBI-GeneID:
119862249
NCBI-ProteinID:
XP_038274541
LinkDB
All DBs
Position
10:16008594..16050618
Genome browser
AA seq
1394 aa
AA seq
DB search
MTIVDKVSESSNPAACQKQPCSSVVPSTGDMDSASASWGAVSSLEVPKHKITLGPVPGAA
VYSSSSVPDKSKPSVQKDQSIGDGIAPPQKVLFPAEKICLKWQQTHRVGAGLQNLGNTCF
LNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQAHITQALSNSGNVIKPMAVIN
DLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSNKLDRHTQATTLVYQIFGGYLRSR
VKCMNCKGVSDTFDPYLDITLEIKTAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVPAS
KRFTIHRSSNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFSCHAGHYYCYIKASNGQWYQMNDSVVSNSDIRSVLNQQAYVLFYIRSHDMKNGGEH
PHSIHTPGQSSPRPVINQRVVNSRQGASGFIGPQLPPHMIKNSSHLNGTGSLKETPSSSV
ASASNVTLNRPASAPPSTSIQNWTINRPIIPDPSKKQKITISIHNNKLPARQTLSQPNLH
NSLENLSKPVPSSTITNSSAVKSTSNAPTMSVATKVSKQTAPSDSCSKPLMNGKSKLNSS
TLVPYGAESSEESDEESKGLVKENGHSKSFNGILIGNVVSTLQNSCSSCQNAEEAVSQHE
LPKNVTVNGAISIDSDPEENGLKFEESTCQVKPVKSTEIPFPKVNGLHGKIIPTALPPVP
EDRILESFRYNQLKSLSEEISATGLEKTSESDGHIETLVGGNNTVSYEKSSKVPANLSCN
VQNPFTASDPETISTKEEIAESIVSKTDHAHSDISGQCNTKKISLGIDDEFSKQCDTKDY
ADKMIGTQEVKMTLKESPLHIRGSAETAEKLGQSPFIKSDNECSSKKLAALNIIDKCQET
KESANNYTDVPPTNDSSATRLNKVLESHSKENNGLDGNEICEENKDRQKFKSHSPIKEKN
CTPKKIDKGHYRTKRERSENEEQEKQIKSKPDDDYSKKRQSYSKESTKQDRHKQEHCNGN
KNKLIHSERNSPDNGRSLGKYTHYRSRSRGKTDQERSRYYHSKRERSWSRERYYQDMPRR
WDKCRYYNDYPSYAARDGRDRKFFHGDRDYDKSSQVYNSRSYRDYYYTSRWNHEPVAKER
EKHHFGSSKIDLYNCSAPSQHSEKYSHEKCASMSEENNISFETSCHKYEYLKDRKRKCAS
LESSDSDMEKKQRRSLQSEPTEEQKVKKHKKSKKKKKSKDKHREKDDRHHQDSDFSGACS
DSDIHKHKKKKKKKKKHTKKSEGFIEYLDPNIQKAVGSEANKTWEKKEFHCTDDPPSEEY
SKHGSKWPHEGGDADSCHKTKYIGGDQENSYHISKEYSKAIELPCHKDHEHTVIKSLDGN
FAYTDETRWKVSEK
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagtatctgagtcttcaaaccctgcagcttgtcagaaacagcct
tgtagctccgtggtaccctctactggagacatggactcagcctctgcaagttggggtgct
gtatcgtcgttggaagttccaaagcacaagatcactttgggacctgtacctggtgctgca
gtttattctagttcatctgtacctgataaatccaagccttcagttcagaaagatcaatct
attggtgatggcattgctccgccacagaaggttctttttccagcagagaagatttgtctg
aaatggcagcaaacgcatagagttggagctggactccaaaatcttggcaatacatgtttc
ctcaactctgctcttcagtgtttgacttatacaccccctcttgccaactacatgctttct
catgaacactcaaaaacatgccatgaacaaggattctgcatgatgtgtacaatgcaagct
cacattacccaggcgctctctaactctggcaatgtcatcaaacctatggctgtcatcaat
gatcttagacggatagcaaaacatttccggtttggaaatcaggaagatgcacatgaattt
ctacgctacactgttgatgctatgcagaaagcatgtttgaatggaagcaacaaattggac
agacatacccaggctaccacactcgtctatcaaatatttggagggtacttaagatcaaga
gtaaagtgtatgaactgcaaaggagtctcagatacctttgatccgtaccttgatattaca
ttggagataaagacagctcaaagcgtaaacaaagctctggaacagtttgtgaagcctgaa
caactggatggtgaaaatgcctataaatgtagcaagtgtaagaagatggttcctgcttca
aagaggtttacaatacatcgttcttctaatgttcttacactgtctctgaaacggtttgca
aattttagtggtggaaaaattaccaaggaagtgaaatatcctgagtatctggatattcga
ccatatatgtctcaaccaaatggagaaccaatcatttatgttctatatgcagtcctggtg
catactggtttcagttgtcatgcaggacactactactgctatataaaggccagtaatggg
caatggtaccagatgaatgattctgttgtgtccaacagtgacatcagatctgtgctcaat
cagcaagcttatgtgctcttttatatcaggtcccatgatatgaaaaatggaggagaacac
cctcattctattcatacaccaggacagtcttctccccgtccagttatcaatcagcgggtg
gttaatagcaggcagggggcatcaggatttattggaccacagcttcctcctcacatgatt
aagaattccagtcatttaaatggaactggatcactgaaagaaactccaagcagttctgtg
gcaagtgctagcaatgttaccctaaacagaccagcttcagctccaccttcaacttccatt
caaaactggacaattaacagacccattattcctgacccttcgaaaaaacagaaaatcact
atcagtattcacaataacaaattgcctgctcgccaaactctgtctcaacccaaccttcat
aattctttggagaatctcagcaaacctgttccttcgtccacgattacgaattcctctgca
gtaaagtctacctcaaatgcacctacaatgtcagttgctactaaagtatctaaacaaaca
gctcctagtgactcttgttctaagccattaatgaatggcaagtctaaactaaactctagt
acgttggtcccttacggtgcagaatcttcagaagaatctgatgaggagtcgaagggacta
gttaaggagaatggccactcaaaatcctttaatggaattttgattggaaatgtagttagt
acattacagaactcttgttcttcctgtcaaaatgctgaagaggctgtatcccagcatgaa
ctgccaaaaaatgttacagttaatggtgctattagtatagatagtgatcctgaagaaaat
ggattgaaatttgaagaatctacttgccaagtcaagcctgttaaatctacagaaattcca
tttcctaaagtgaatggattgcatggaaaaataatacctacagctttgccaccagttcct
gaagataggattttagagtctttccgatataaccagttgaaaagcttgtcagaggaaata
agtgcaactggacttgaaaaaacttctgaaagtgatggtcatatagaaactttagtcggt
ggcaacaatactgtttcctatgagaagtctagtaaagttcccgctaaccttagctgcaat
gtccagaatccctttactgcatcagatcccgagaccatttctaccaaagaagaaattgcc
gaaagtattgtatcaaaaactgatcatgcacattctgatatcagtggtcagtgtaacact
aagaaaatatccctgggaattgatgatgaattctctaaacagtgtgatactaaggattat
gcagataagatgataggaacacaagaggtaaaaatgactttgaaagagagccctctgcac
atcagagggtctgctgagactgcagagaaattggggcaaagtcccttcataaagtctgac
aatgaatgtagttctaaaaaacttgcagctctaaacattatagataaatgccaagaaaca
aaggagagtgctaataattacacagatgtaccacctactaatgattcttctgctacaagg
ttgaataaagttttagagagtcattctaaagaaaacaatggactggatggtaatgaaata
tgtgaagaaaataaggataggcaaaaatttaagtctcattctccaattaaggaaaaaaat
tgcacccccaaaaaaattgacaaagggcattaccgtactaaaagagagcgctctgaaaat
gaagagcaggagaagcaaatcaaaagcaaaccagatgatgattattccaaaaaaaggcaa
tcctatagcaaggagagtacgaagcaagatcgccataagcaggagcactgcaatggaaat
aagaacaaacttatacatagtgaaagaaacagccctgataatggcagaagtttaggaaaa
tacacccattatagatcccgaagtagagggaaaactgatcaggagaggagtagatattac
cattctaaaagggaaagatcttggagtagggaaagatattaccaagatatgccaaggaga
tgggacaagtgcagatattacaacgattatccttcttatgcagcaagagatggtagagac
agaaaattctttcatggggacagagactatgacaaatcaagtcaggtttacaacagtagg
tcatatagggattattattacacaagcagatggaatcatgaaccagtagctaaagagaga
gagaaacatcatttcggcagctccaaaatagacttgtataattgctcagctccctctcag
cactctgaaaaatattcccatgaaaaatgtgcatccatgtctgaagaaaacaatataagt
tttgagacgtcttgccacaaatatgaatatctaaaagacagaaaaagaaaatgtgctagt
ctagaaagtagtgacagtgatatggaaaagaaacagagaaggagtttgcagagtgagcca
acggaagagcaaaaagtgaaaaaacacaagaagtcaaagaaaaaaaagaagtccaaagat
aaacaccgagagaaagatgacagacatcaccaggattcagacttctctggggcctgctct
gattctgacatccacaaacataagaaaaagaagaagaaaaagaagaaacatacaaagaaa
tctgaggggtttattgaatatttagatcctaatatccagaaggctgttggttctgaggct
aataagacatgggagaaaaaagaatttcattgtacagatgaccctccatctgaagaatat
agtaaacatgggagtaaatggcctcatgagggaggggatgctgattcctgtcataaaaca
aaatacataggaggagaccaggaaaatagctatcacatatctaaagagtatagcaaagct
atagagctaccttgtcataaggaccatgaacacacagtcattaaatctttggatggcaac
tttgcatacacagatgaaaccagatggaaagtgagtgaaaagtaa
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