Dermochelys coriacea (leatherback sea turtle): 119862354
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Entry
119862354 CDS
T09064
Symbol
SMURF1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04120
Ubiquitin mediated proteolysis
dcc04137
Mitophagy - animal
dcc04144
Endocytosis
dcc04340
Hedgehog signaling pathway
dcc04350
TGF-beta signaling pathway
dcc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119862354 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119862354 (SMURF1)
04350 TGF-beta signaling pathway
119862354 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119862354 (SMURF1)
04137 Mitophagy - animal
119862354 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
119862354 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcc04131
]
119862354 (SMURF1)
04121 Ubiquitin system [BR:
dcc04121
]
119862354 (SMURF1)
03029 Mitochondrial biogenesis [BR:
dcc03029
]
119862354 (SMURF1)
Enzymes [BR:
dcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119862354 (SMURF1)
Membrane trafficking [BR:
dcc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119862354 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
119862354 (SMURF1)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
HECT type E3
119862354 (SMURF1)
Mitochondrial biogenesis [BR:
dcc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119862354 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
119862354
NCBI-ProteinID:
XP_038274903
LinkDB
All DBs
Position
10:9065940..9129510
Genome browser
AA seq
727 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKXDSLTISVWNHKKIHKKQGAGFLACVRLLSKPRRLKDTGYQRLDLCKL
NPTDXDAVRGQIVVSLQTRDRIGSGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPAP
YTDTTGAAGGGNCRFVESPSLDQRLQAQRLRNPEVRGHVQTPQNRPHGHQSPDLPEGYEQ
RTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHN
NRTTQFTDPRLHHIMNHQCQLKEPSQPLPVPNEGSLEDGEELPAQRYERDLVQKLKVLRH
ELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREW
LYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYIN
GGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQ
HELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKE
LELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRV
PLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEE
TCGFAVE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatccagggacccggagaaacggctccagcatcaaaatccggctcacagtatta
tgtgccaagaatcttgcaaaaaaagatttcttcagacttcctgatccatttgcaaaaata
gtagtagacggatcaggtcagtgccattcaactgacactgtgaagaacacattagacccc
aagtggaaccagcattatgatctatatgttgggaaanacgattctctaaccatcagtgta
tggaatcacaagaaaatacacaagaaacagggagctggcttcctggcgtgtgtccgtctc
ctttctaagcctcgcagactaaaagatactggataccagcgtttggatctatgcaaatta
aaccccacagatnctgatgcagtacgaggccaaatagtggtcagtttacagacacgggac
agaataggctcaggaggttctgtggtagattgtagagggctgttggagaacgaaggaacg
gtttatgaagattctggacctggaaggccactcagctgtttcatggaggaaccagcacca
tatacagatactactggtgctgctggtggagggaattgtaggtttgtggaatctcctagt
ctagatcagaggcttcaggcacagcgacttcgaaaccctgaagtcagaggtcatgtacaa
acacctcagaatagaccacatggtcatcagtcacctgacctacctgaaggttacgaacaa
aggacaacggtacagggacaggtttattttttgcacacacagactggagttagtacgtgg
catgacccgaggataccaagagaccttaacagtgtgaattgtgatgaactaggtcctctg
ccaccgggttgggaagtgagaagtacagtgtctggaagaatatattttgtagatcacaat
aacagaaccacacagttcacagacccaagattacatcacattatgaaccatcaatgccaa
ctaaaagaaccgagccagcctttgccagtcccaaatgaggggtcattagaagatggtgag
gagttgcctgcccaaagatatgaaagagacttagtacagaaactaaaagtccttagacat
gaactctctcttcagcaaccacaagctggtcactgccgcattgaagtatccagagaagaa
atatttgaggagtcctaccgtcagataatgaagatgaggccaaaagacttgaaaaagagg
ctgatggtgaaatttcgaggagaagaaggcttggattatggtggagtggcaagagagtgg
ttgtatttactgtgccatgaaatgttgaacccctattatggacttttccagtactctact
gacaatatttacatgctgcaaatcaatccagactcttctatcaatcctgatcatttatca
tatttccattttgttggtcggataatgggtttagctgtgttccatggacactacatcaat
gggggtttcacagttcccttctacaaacagctgctggggaaacccattcagctatctgat
ctggaatctgttgacccagaactgcacaagagtttagtttggattttagagaatgacatc
accccagtgttggaccatactttctgtgtggaacacaatgcttttgggcggattctgcag
catgagctcaaaccaaatggcagaaatgttcctgttacagaagagaacaagaaagaatat
gtcaggttgtatgtaaactggcgatttatgagaggaattgaggcacaatttctggctcta
caaaaaggctttaatgaacttattcctcaacacttactaaagccttttgaccagaaggag
cttgagctaataataggaggcctggataagatagacctgaatgactggaagtcaaacaca
cgtctaaagcactgcatggcagatagcaatatcgtaaagtggttttggcaagccgtggaa
acgtttgatgaggaaagaagggcgaggctcttacagtttgtgactgggtccacacgtgtc
cctcttcaaggtttcaaggctttgcaaggcgctgcaggacccaggctgtttaccatccat
ttgatagatgcaaatacagacaaccttccaaaagcccacacttgctttaaccgaattgac
attccgccttatgagtcatatgagaagctttatgagaagctactgacagctgtggaagag
acatgtggatttgctgtggagtga
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