Dermochelys coriacea (leatherback sea turtle): 119862579
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Entry
119862579 CDS
T09064
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04350
TGF-beta signaling pathway
dcc04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119862579 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119862579 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dcc04515
]
119862579 (NEO1)
Cell adhesion molecules [BR:
dcc04515
]
Immunoglobulin superfamily
DCC/UNC5 family
119862579 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
Ig_Rha78A_N
C2-set_2
Tissue_fac
fn3_2
DUF4998
TMEM154
TM_ErbB1
EphA2_TM
GBS104-like_Ig
FAM176
Motif
Other DBs
NCBI-GeneID:
119862579
NCBI-ProteinID:
XP_038275452
LinkDB
All DBs
Position
10:complement(42323597..42823114)
Genome browser
AA seq
1471 aa
AA seq
DB search
MAARGARRLLGSLWIALFLGQPDPAAAARSSSQSPAGSTVRTFTPFYFLVEPVDTLSVRG
AFVILNCSAYCETSPKIEWKKDGTFLNLVSDDRRQLLPDGSLLINGVVHSKHNKPDEGYY
QCVATVESLGTIVSRTAKLTVAGLPRFTSQPESTSVYRGNSVILNCEVNADLVPFVRWEQ
DRQPFFLDDRIFTLPSGALIISNVTDGDGGLYRCVIESGGSPKYSDEAELKVLPDPEVPL
NLVFLRQPSSLTKVTGQSAVFPCVTAGFPTPVIKWMRNEEELTIEDSERFLLLAGGSLEI
SDITEDDAGTYACIVDNGNETIEAQADLIVQAPPEFLKLPANIYAHESMDIVFECEVTGK
PTPTVKWIKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLII
LEHDVAIPTLPPTPLTSATTDHLAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPH
GDNLTYTVFYTKEGINRERVENTSRPGEMQVTIQNLMPETVYVFRVVAQNKHGPGESSVP
LKVATQPEVQLPGPAPNIRAYANSPTSITVTWDTPLSGNGEIQNYKLYYMEKGTDNEQDV
DVGGHSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVVVQTLSDVPSAAPQNLSLEVRNS
KSIMIQWQPPPAGTHNGQITGYKIRYRKASRKSEVTESIGGTQLFQLIEGLERGTEYSFR
VAALTSNGTGPATDWISAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIVV
RGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTR
PHTDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKITDA
RYYTVRWKTNIPANTKYKTANTTTLSYLVTSLKPNTLYEFSVMVTKGRRSSTWSMTAHGT
TFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE
PVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQALGS
AGKGSRPLDIGPDYKPPMSGSNSPHGSPTSHLDSNMLLVIIVSVGVITIVIVVIVAVFCT
RRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDT
PIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQP
VISAHPIHSLDNPHHHFHSGSLASPTRSYHHHQVNPWPIGMSMSNSDRANSTESVRNTPS
TDTMPASSSQTGCADHQDPESATASYLANAQEEDSGQSLPTAHVRPSHPLKSFAVPAVPP
TGSTYDPALPSTPLLTQQASNHPVHSVKTASIGTLGRTRPPMPVVVPSAPDVQETTRMLE
DSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggggagccaggcggctcctcggctccctctggatcgccctgttcctaggg
cagccggacccggcggccgccgccaggagcagctcgcagagccccgcagggtccaccgtg
agaaccttcactccattttattttctggtggagccagtggacaccttatcagttcgaggg
gcttttgtcatactgaactgttcagcttactgtgagacttctccaaaaattgaatggaag
aaagatgggactttcctaaatttggtgtcagatgaccggcgccagctgctaccagatgga
tctttattaataaatggtgtagtgcattccaagcacaataaacctgatgaaggatattat
caatgtgtggcaactgtggaaagccttgggaccattgtaagcagaacagcaaagcttaca
gtagcaggacttccaaggttcactagccagccagaatcaacatctgtctatagaggaaac
agcgtaattctgaactgcgaggtcaatgctgatctggtaccatttgtgaggtgggagcag
gatcgtcagccattctttttggatgaccgtatattcacattaccgagtggagctctaatc
attagcaacgttacagatggggatggaggactctatcgctgtgtcattgaaagtggtggt
tcccccaaatacagtgatgaagcagagcttaaagttcttccagatccagaggttccatta
aacctggtgtttctgaggcaaccttcttcacttactaaagttactggacaaagtgcagtt
ttcccatgtgtcactgcaggatttccaactccagttatcaagtggatgaggaatgaagaa
gaacttaccatagaagactctgaaagatttctgttactggcgggagggagcctggagatc
agtgatatcacagaagatgatgctgggacatatgcctgcattgtggataatgggaatgag
acaattgaagctcaagcagatcttatagttcaagctccacctgaatttctgaagctgcct
gctaatatttatgctcatgaatctatggatattgtctttgagtgtgaagtgactgggaaa
ccaactccaacagtgaaatggatcaagaatggagacatggtgatccctagtgactacttc
aaaattgtaaaggagcataacctacaggttttgggtcttgtgaaatcagatgaaggattc
tatcagtgcattgcagaaaatgatgttggaaatgcacaggctggagcccagctgataata
cttgaacatgatgttgccatcccaacattacctcctactccactgaccagtgccactact
gaccatctagcacctgccacaactggaccgttgccttcggcccctcgggatgtcgtggcc
tccctcgtctctactcgcttcatcaaactaacatggcggacaccagcatcagatcctcat
ggagacaacctcacctatacggtattctacaccaaggaaggtataaacagagaacgtgtt
gaaaatacaagtcgtcctggagagatgcaagtgacaatccaaaacctgatgccagagacc
gtgtatgttttcagagttgtggctcaaaacaaacatggccctggagagagctcagtacca
ctaaaggtggcgactcagcctgaagttcaacttcctggtccagcaccgaacattcgagca
tatgctaattcacccacttcaattactgtcacatgggacacaccgttgtcaggcaatggt
gaaatccagaactacaagctctattacatggaaaaggggacagataatgaacaggatgtt
gatgttggaggtcactcctacaccattaatggattaaagaaatatactgagtacagcttc
cgagtggtagcctacaataaacacggtcccggagtctctacccaagatgttgttgtgcag
actctgtcagatgtccccagtgctgcaccccagaatctgtcgctggaagtgcggaattcc
aagagcatcatgatacaatggcaaccccctcctgcaggaacacacaatggtcaaatcaca
ggctacaaaattcgctaccgtaaagcatctcgtaagagtgaggtaacagagagcattggt
gggacacaactttttcagctaattgaaggtcttgagcgaggtacagaatatagtttccgt
gtggctgccttaacaagcaatggtacaggaccagctactgattggatatcagcagaaact
tttgagagtgatctagatgaaactcgtgttcctgaagttccaagctccctacatgttcgt
ccacttgttacaagtattgtagtgagctggactcctcctgaaaaccagaacattgtggta
agaggatatgctatagggtatggcattggcagtcctcatgcacagactatcaaagtggac
tacaaacaacgctattacaccattgagaacttggatccaagttcccactatgtcataact
ctgaaagcatttaacaatgttggtgaaggaatcccactctatgagagtgcagtgaccagg
cctcatacagacacttccgaagttgatttatttgttattaatgctccatacactccagtg
ccagatccctcccccatgatgccaccggtgggagttcaggcttccattctgagccatgac
accataaggatcacttgggcagacaattctctgccgaagaatcagaagatcacagatgct
cgctactacacggtccgctggaaaaccaatattcctgcaaacacgaagtataagactgca
aacacaaccaccttgagctatttagtgaccagtttaaaaccaaacaccttgtatgagttc
tctgtgatggtgactaaaggtcgaagatcaagtacttggagtatgacagcacatgggact
acctttgaattagttcctacgtctccaccaaaagatgtgactgtggtgagcaaagaggga
aaacctaggaccataattgtaaactggcagcctccatctgaagccaatggcaaaattaca
ggatacatcatttactacagcacagatgtgaatgctgagatacatgattgggtcatcgaa
cctgtggtgggaaacagattgacacaccagatccaagagttaacccttgatacgccatat
tatttcaaaatccaggcccgcaactccaagggcatggggcctatgtcggaggcagtacag
ttcagaacacccaaagctgaatcctcagataaaatgcctaatgatcaagcattagggtct
gcaggaaaaggaagtcggccattggatataggacctgactacaaaccacccatgagtggc
agtaacagtcctcatggaagccccacatcccacctggatagcaacatgcttctagtcata
atagtatctgttggagtgatcaccattgtgatagtggtgattgttgctgtcttctgcact
cgtcgcaccacctctcaccagaaaaagaaacgagctgcctgcaaatcagtgaatgggtcc
cataaatacaaaggaaattccaaggatgtcaaaccccctgacctttggatccatcatgag
agactggagctgaaacccattgataaatctccagaccctaacccaatcatgacagacacc
ccaatccctcgcaactcccaggacatcacgccagttgacaattccatggatagcaatatc
catcaaaggcgcaactcatacagggggcatgagtcagaggacagcatgtccacattggca
ggaagaagagggatgaggccaaaaatgatgatgccatttgattctcagccccctcagcct
gtgattagcgctcatcccatccattcactcgataaccctcaccatcatttccactccggc
agcctcgcttctccaactcgcagctatcaccatcatcaggtcaacccttggccgattggc
atgtccatgtccaattcagacagggccaattccacagaatctgttcgaaatacaccgagc
acagacaccatgccggcttcctcatctcagacaggttgtgctgaccatcaagatccagaa
agtgccacagcatcttatctggccaacgcacaggaggaggattcaggtcaaagtctccct
actgcccacgtccgtccctctcaccctctgaagagctttgcagtaccagcagttccaccc
acaggttccacatatgaccctgcattgccaagcacaccgttattgacgcagcaagcttct
aaccatccagttcactcggtgaagactgcgtctatcgggactttagggagaactcgacca
cctatgccagtggtagtgcccagcgcccccgatgtgcaggagaccaccaggatgcttgag
gactcagaaagtaactatgaaccggatgagctgaccaaagagatggcccacctggaagga
ctaatgaaggaccttaatgccatcactacagcatga
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