Dermochelys coriacea (leatherback sea turtle): 119862830
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Entry
119862830 CDS
T09064
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dcc03037
]
119862830 (IFT140)
Cilium and associated proteins [BR:
dcc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
119862830 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
WDR55
Beta-prop_WDR75_1st
TPR_COPA_B
TPR_GEMI5
Beta-prop_CAF1B_HIR1
Clathrin
WD40_MABP1-WDR62_1st
RNase_HII
FtsK_SpoIIIE_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
119862830
NCBI-ProteinID:
XP_038276113
LinkDB
All DBs
Position
10:complement(38294274..38545003)
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AA seq
1464 aa
AA seq
DB search
MAVYVGHRIEVPDSVGSPSHITWHPLHPLLAVASISPTSGGSVDIYLEQGDHVPDSHTER
SFRASSLSWHPSRLILAVGWETGEVVVLNKQDKEHHTVPPNHNAEITVLNWSTNGTRLVS
GDRLGVMVLWRLDQRGRVQGLPLLKHEYGKYLSHCIFWPPPPGEDLVQLAKAAVSGDEKA
LDMFNWRKAGIGVPLKVGPQEGLSFFISVADGSVHYVNEKGKTSHAFSTDSPIQKLLIME
KRDVLVVITENLLLSMYTITLEGEAEEIMKVGEVKLSGKIGHSADIILIDRSLLVTAIGE
TVLRFWDLERSENYVLFLDVQLGFEAGECVNSVSYCTVKGLLAAGTNKGRIAMWRKASVS
NQSTWALEGKDRWKLQTPTELEGNITQIKWGSRKNLLAVNNMSSVVILSEQAMSSHFQQQ
VAVVQVSPTLLNVTFFGTGATHSLRIDMHINGVFATKDAVVFWNGKQVTVFECSGATLRN
AGSFLCDSPVLAMHEESIYTVEPNRVQVRTWQGTVKQLLMFSEAEGNPCLLDVCGNFLAV
GTDLAHFKIFDLSRREAKVHCSSKNLTELFPGLRGIASVKCNSYGNKVSILVNKADESLD
SKICFYDVEMDRVTLFDFKAGQGDSGAVPSYSGQEPEKSVTEHPALQDHIPVSHFWDNSE
PRLFVCEAVLEPNLQFPDKQQQQQTESSESTPDVLIISFFCTEEHGLLLQESFPLPSTYQ
ALLGIEVPHYYFAKKPGEAEKEAQVDSGSVQLSQMVAKRPMRDFIGLEECDKTTREAMLN
FSFYLTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGAKALRE
AEKEPEVEARVAMLAVQLGMLEDAERLYKNCNRYDLLNKFYQASDQWQKAMEVAETHDRV
HLRTTYYNYAKHLEATAECNIALSYYEKSDTHRFEVPRMLSEDLQALEIYVNKMKDKSLW
KWWAQYLESQSDMESALRYYELAQDYFSLVRLYCFQGNIQKAAEIANETGNWAASYHLAR
QYESQDEIKQAVHFYTRAQAFNNAIRLCKENNLDDQLMNLALLSSPEDMIEAACYYEEKG
EQMDRAVMLYHKAGHFSKALELAFATQQFGALQLIAEDLDEKSDPALLARCSDFFIEHTQ
HEKAVELLLAAKKYHEALQLCLNQNLTITEEMAEKMTVSKDSKELSVESRKELLEQIADC
CMRQGNYHMATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQREIYIMAANYLQSLD
WRKDPEIMKNIISFYTKGKALDLLAGFYDACAQVEIDEYQNYERAQGALTEAFKCLSKVK
TRSPVEQESKLALLQSKMALVKRFIQARRVYSEDPKEAIRQCELLLDEPDLDSTIRLGDV
LGFLVEHYLQVEDFQMAYRYLEEMRKRIPCVNLTYYVNERTIEAVHRGLGIPWNQNPVPE
RIRHNSMEDNKEVEEDVADEVEDP
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtatgttggtcacagaatagaagtccctgattcagttgggtccccttcccac
ataacttggcaccctcttcatccactcctggctgttgcttccattagcccaacatctgga
ggtagtgtggatatctatttggaacagggagatcatgtgcctgattcacacactgaaagg
agttttcgggcctcatctcttagctggcacccatccagactgatcctggcagtaggctgg
gagacaggggaagtggtggtgcttaacaaacaggacaaagagcaccacacagtacccccc
aaccataatgccgaaattactgtcctaaactggagtactaatggtacccgccttgtgtct
ggtgatagacttggagtcatggttctatggagactggaccagcggggtcgagtgcagggc
ctccctttattgaaacatgagtatggaaagtatctttctcactgtatcttttggcctcca
cctcctggcgaggacctggtacagctagccaaagctgcggtgagtggtgatgagaaggcc
ctggatatgtttaactggagaaaagctggaatcggagtgcctctgaaagtgggaccccag
gaggggttatccttcttcatcagtgtggcagatgggtctgtgcattacgtgaatgaaaaa
ggaaagacaagccatgcattcagcacagacagtccaatccaaaagctcctgatcatggag
aagagggatgttttggtggtaataacagagaacctcctgttgtccatgtacacaataact
cttgaaggagaagcggaggaaatcatgaaggtaggtgaggtgaagttgagtggaaagata
ggccactctgcggacattattttaatcgaccgtagcctccttgttacagcaataggtgaa
acagtcctcaggttttgggatttagagcggagtgagaattatgtgctctttctagatgtg
cagcttggctttgaagcaggggaatgtgtaaactctgtctcttactgcactgttaaaggt
ctcctagcagctggtaccaataaagggagaatagctatgtggaggaaagcatcagtgtcc
aatcagagcacatgggcgttggagggaaaggacagatggaagcttcagacccctacagag
ctggagggaaatatcactcagataaagtggggctccaggaaaaacctactggcagtgaac
aacatgagctctgtggtgatcctcagtgagcaggctatgtcatctcatttccagcagcag
gtggcagtagtgcaagtgtccccaactcttcttaatgtgaccttctttggcacaggagcc
acgcacagcctccgtattgatatgcatattaatggagtatttgccactaaggatgctgta
gtgttctggaatgggaagcaagtcactgtctttgaatgctcaggagccactttacgaaat
gcaggctctttcctctgtgattctccagtgctggctatgcatgaagaaagcatttacaca
gttgagccaaatcgggttcaggtccgcacctggcagggtactgtcaaacagctgctgatg
ttctctgaagcagaggggaatccctgcctgttggatgtctgcgggaatttcctggctgtg
ggaacggacttggctcactttaaaatctttgatctctctcgcagagaggcaaaagtgcac
tgcagtagtaagaacttgactgaactttttcctggcctgcggggcattgcatcggttaag
tgcaattcttatggcaacaaagtcagcatcctcgtcaacaaggctgatgagagtcttgac
tctaagatctgtttttatgatgttgaaatggacagagtcacattatttgatttcaaggct
ggacaaggggatagtggagccgtgccctcctactctggacaagagcctgaaaagagtgtc
actgagcatccagcactgcaagatcacatccctgttagccacttctgggacaatagtgaa
ccaagactttttgtatgtgaagcagtccttgaaccaaacctgcagtttccagacaagcag
cagcagcagcagacagagagctcagaaagcacaccggatgttttgattatatcattcttc
tgtactgaagagcatggtcttttgcttcaggaaagcttcccattgccttcaacctaccag
gctcttctgggcatcgaggttccacattattactttgcaaaaaagccaggagaagctgag
aaagaagcacaagtggactctggctcagtacaactctctcaaatggttgccaaaaggccc
atgagagatttcattggtctggaagagtgtgacaaaactacccgtgaagctatgctgaac
ttcagcttctatctaacaattggggacatggatgaggccttcaaatccatcaaactcatc
aaaagtgaggcagtctgggagaatatggcccgcatgtgcgtgaagactcagaggctggat
gttgccaaagtttgcctcggaaacatgggtcatgccagaggagctaaggcattaagggag
gcggaaaaagaaccagaggtggaagccagagtggccatgttggcggttcagctgggcatg
ctggaagatgcagagcggctgtacaagaattgcaatcgctacgacctcctgaacaagttc
taccaggcttctgaccagtggcagaaagctatggaagtagctgagactcatgaccgggtt
cacctgcgcaccacatactacaactacgccaaacacctggaggccactgcagagtgcaat
attgcacttagctactatgagaaatcagacacgcataggtttgaggtgcccaggatgctc
tctgaagatttacaagccttggagatctatgtcaacaagatgaaagataagagcttgtgg
aaatggtgggcacagtatctggaaagccagtcagatatggaatccgcactaagatactat
gagttagctcaggattatttctccctggttcgtctttattgctttcagggcaacatccag
aaggctgctgaaatagcgaatgaaacgggaaactgggcagcatcctatcacctggcccgc
cagtacgagagccaggatgaaatcaagcaggctgtgcacttctacactagggcccaggca
tttaacaatgccattcgcttgtgtaaggagaacaatctggatgaccagctgatgaacttg
gctctgctgagttccccagaagacatgatagaggcagcctgctactatgaagagaagggg
gaacaaatggacagagcagtcatgttgtaccacaaggcaggacacttttccaaagcactg
gaactggcttttgccacacagcagtttggtgccctgcagctgattgctgaggacctggat
gagaagtcagacccagccctgctggcacgctgctctgacttcttcattgaacacacacag
cacgagaaggccgtggagttgttgctagcagccaaaaagtaccatgaagccctgcagctt
tgcttgaatcagaacctgaccatcacagaggagatggccgagaagatgactgtctccaag
gattcaaaggagctctctgtagagtctaggaaagaactgctggaacagattgccgattgc
tgcatgcggcaaggcaattaccacatggcaaccaagaaatacactcaagcaggaaacaag
ctgaaggcaatgagagcactgcttaagtctggagacacagagaaaatagtgttttttgct
ggagtctccaggcagagggagatttatatcatggcagccaactacctacagtcactggat
tggcgaaaggacccagagattatgaagaacatcattagcttctataccaagggaaaggcc
cttgacctcttagctggcttttatgatgcctgtgctcaggtggagatcgacgaatatcag
aactatgagagagcacagggagcactgactgaggcatttaagtgcctgtcaaaggtgaag
acgagaagccctgtagagcaggagagcaaactggcactcttacaaagcaagatggctttg
gtcaagcgattcatccaggctcgaagagtttactctgaggaccccaaagaggcaatcagg
cagtgtgagcttctcctcgacgagccagaccttgacagtaccatccgcctaggtgatgtc
ttgggctttctggttgaacattacttacaggtggaggacttccagatggcctacagatac
ttggaggagatgcggaaaagaattccatgtgtaaacctgacctactatgtgaatgaacgg
accattgaggcagttcacagagggctgggcattccctggaaccagaaccctgtcccagaa
cgaattcgccacaacagtatggaagacaacaaggaggtggaagaggatgtagctgatgaa
gttgaggatccctga
DBGET
integrated database retrieval system
