Dermochelys coriacea (leatherback sea turtle): 119862855
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Entry
119862855 CDS
T09064
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03430
Mismatch repair
dcc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119862855 (PMS2)
03460 Fanconi anemia pathway
119862855 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119862855 (PMS2)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119862855 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
119862855
NCBI-ProteinID:
XP_038276191
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All DBs
Position
10:complement(15924043..15941645)
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AA seq
920 aa
AA seq
DB search
MIARGWSPQELCGCGLWPRRLNVGALLACVPGVLRAGSRDSMEATAPCAQPAKAIKPIDH
NSVHQICSGQVVLNLGTAVKELVENSVDAGATNIDLKLKDYGTDLIEVSDNGCGVEEENF
EGLTLKYYTSKIQDFSDLVHVGTFGFRGEALSSLCALSDVTIFTCHKSAKVGTRLVFDHN
GKITQKTPYPRQQGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQILQAYCIISTGVRI
NCTNQVGQGKKHSVVCTTGSCSLKENIGAIFGQKQLQSLIPFVQLPPSEAVCEEYGLNST
DMPQNLYTITGFVSHCDHGVGRSTTERQFFFVNQRPCDQSKISKVVNEVYHMYNKHQYPF
IVLNICVDSECVDINVTPDKRQILLQQEKVLLAILKTSLVGMFGSNVNKLNINQKLLDIT
GNFKKIVAEETEKPQTGMLLDFAAQNPKGEEKRAMTIVKLRESFSLHQMTESSFQSPNNV
GNQHNSPGKRKLMSFLNTSSPVRSQKSISSKESEPRRQMDSNTYSVTSRDLRKLENDTDS
GCGSTSAESNVGFSTPEVGSCLSNESAGSSPEEEFLISKEELQSVYLETVELSEELLEYD
AKFSGVEHELTQVGEQNELSELPQQANSFPPNVKRFKIEQANLKAATCPELRSAENSASV
PHVDVPIEIKKKTVPLEFSMSSLAERVKRLIQQQQKKAETQNYRRFRAKISPGDNKAAED
ELRKEISKEMFAKMEIIGQFNLGFIVAKLNSDLFIIDQHATDEKYNFEMLQQHNILQGQK
LIAPQNLNLTAVNETILIENLEIFRKNGFDFVIDENAPVTERVKLISLPTSKNWTFGPQD
IEELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALTVNEMKKLITHMGEIEHPWN
CPHGRPTMRHIANLDMISQE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgcgggggtggagcccacaggagttgtgcggctgtgggctctggcccaggagg
cttaacgtgggcgcgttgctggcctgtgtcccgggagtcctgcgtgccgggagcagagac
tctatggaggccacggcaccctgtgcacagcctgctaaagccatcaagcctatagatcat
aattcagttcaccagatctgttcaggacaggttgtcctgaatctaggcactgcggtgaag
gaattggtggaaaacagtgtagatgctggagctactaatattgacctaaagcttaaagat
tatggaacagatcttatagaagtttcagataatggttgtggagtagaggaagaaaacttt
gagggcttaactctgaaatattatacttccaagatacaagatttctctgatctagtgcat
gttggaacatttggatttcgaggtgaagctctgagttcactgtgtgcattaagtgatgtt
accatttttacttgtcacaaatctgcaaaggttggaactcgtctggtatttgatcacaat
ggaaaaattactcagaaaactccttacccacgacaacagggaacaactgttagcgtgcag
caattgttttataccctgccagtgcggcacaaggaatttcaacgaaatattaaaaaggaa
tatgcaaaaatggtccaaatattacaagcatactgtatcatttcaacgggagttcgaatt
aactgcaccaatcaggttggccaagggaaaaaacactcagtggtgtgtaccactggaagc
tgtagtctaaaagaaaacattggagcaatatttgggcaaaaacagttgcaaagcctcatt
ccctttgttcaactacctcctagtgaagctgtttgtgaagaatatggcctcaactccact
gatatgccacagaatctttatactattacaggcttcgtttcccattgtgatcatggtgtt
ggaaggagtacaacagagagacagtttttctttgtcaatcagcgaccatgtgaccaatca
aagatttctaaagttgtgaatgaagtttaccacatgtataataagcaccaatatccattt
atcgttcttaacatttgtgtagattctgagtgtgttgacatcaatgtaactcctgacaag
aggcaaattttactgcaacaggagaaggttttgttagccattttaaagacctctcttgtg
ggaatgtttggtagcaatgttaacaaacttaacatcaatcaaaaactgctggatattaca
ggtaacttcaaaaagatagtagcagaagaaacagaaaagcctcagacaggaatgctgctt
gattttgcagcccagaatccaaagggagaagagaaaagagcaatgactattgtcaaatta
agagagtcattctctctccatcaaatgacagagagcagctttcagagccctaacaatgtc
ggaaatcaacacaactcccccgggaagagaaaacttatgtcatttcttaacacttcaagt
cctgtaaggagtcaaaagtccatctccagcaaggagtctgaacctcggaggcagatggac
tcaaatacatactcagttactagcagagatttgaggaagttagaaaatgacacagattct
ggatgtggtagcacctctgcggagtcaaatgttggctttagtactccagaagttggtagc
tgcctcagcaatgaaagtgcaggcagttcacctgaagaagagttccttatttcaaaagag
gagcttcaaagtgtatatcttgaaactgtcgaacttagtgaggaattattggaatatgat
gccaaattttcaggggttgaacatgaattgacccaagtgggtgaacagaatgaactgagt
gagttacctcagcaagccaatagttttcccccaaatgtgaagcgttttaaaattgagcaa
gctaatttaaaggcagccacctgtccagaactgaggagtgctgagaacagtgcatcagtg
ccacacgttgatgtaccaattgaaattaaaaagaaaactgtgccacttgagttctctatg
agctctttagcagaaagagtaaaaaggctaatacagcagcaacagaaaaaggcagaaaca
cagaattatagaagatttagagcaaagattagccctggagacaataaagcagcagaggat
gaattaagaaaagaaataagtaaagagatgtttgcaaaaatggaaatcataggtcagttc
aatttagggtttatagtagccaagctgaactctgatctcttcataattgaccaacatgct
actgatgaaaaatacaactttgagatgttacaacagcacaacattctccaaggtcagaag
ctgatagcgccacaaaatcttaatttaactgctgtaaatgaaactatattgattgaaaac
ttggagatatttaggaaaaatgggtttgattttgtcattgatgaaaatgctcctgtaact
gaaagggttaagttgatttccttgccaacaagcaaaaattggacttttggtccacaggac
atagaggagttgatcttcatgttaagtgattgcccaggagtcatgtgtaggccctctagg
gtcagacagatgtttgcttctcgagcttgtagaaaatctgtgatgattggaactgcactt
actgtaaatgagatgaagaaactgatcacccacatgggtgagattgagcatccttggaac
tgtccccatggaaggccaactatgaggcacatagccaatttagatatgatttctcaggaa
tag
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