Dermochelys coriacea (leatherback sea turtle): 119863082
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Entry
119863082 CDS
T09064
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 isoform X1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcc04040
]
119863082 (HCN4)
Ion channels [BR:
dcc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
119863082 (HCN4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Cupin_1
LPD1
Motif
Other DBs
NCBI-GeneID:
119863082
NCBI-ProteinID:
XP_038276772
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Position
10:42135643..42284228
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AA seq
1178 aa
AA seq
DB search
MDKLPPAMRKRFYSLPQPGGAKASIMDEEGDGDKDTRWRSIRLKPLPVAGSTRGDAGPEP
GAKSSTNGDCRRFRGSLSSLASRHLHDAAEGRRLIGGEGEAASPGEERSPPGGGEPQLPP
APARSPPPAPQALPASASIKVEGGAGGDQITPDEELRLGQAGFMQRQFGAMLQPGVNKFS
LRMFGSQKAVEREQQRVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDE
NTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSI
PVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYD
LASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPEDCWVSLNRMVNDSWGKQYSYALF
KAMSHMLCIGYGQQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEK
YKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEDSILGELSEPLREEIINFNCRKLV
ASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKET
KLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDR
LDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHNVQAAAAAASTPT
PVIWTPLIQAPLQAAAATTSVAIALTHHPRLPTAIFRPPVSVLGSLGQPSSQTPRQLKRL
QSIISSSGPSAVGSPSSTLSQLHTPGAETPSSSSFQIQQLAGFTASAGLGQFHQASVGSP
SPGSSQQCLGGTSSAGLNQFQQAPLGAIQQQPLSSNTLPSGFGHFQQATTSSPPTSFTQF
SSNSPSNLLNQFQPTTPRPPQVGQLQPLTGSGTLGGMNHFQPPPSSSSPSSSLSQLAQAS
GGSLSGLCQIQPSALGSATGTIGQLHQERSPFASMSPLQQPGVASPCYTHSGLSPPSQSP
EATRTFQCGPSRASGSHGSLLMPQTSSPPPLVLQPKSSPHLPPRHLSQDIRLISASQPSL
PQELAQTLSQSSPLSSRESVLSFFPFSGGGSRLLRKPCSSIPGRMTLPRQMSSGSLPHPL
VFGASAVVAPSLTTGGRKESVVLPGELEPVRSKLPSNL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggataagctgccccccgccatgcgcaagcggttctacagcctgccccagcccggcggg
gccaaggcgtcgatcatggatgaggagggagacggcgacaaggacacccgctggcggagc
atccgcctcaagccgctgcccgtggctgggagcacccggggagacgccggcccggagccg
ggcgccaagagcagcaccaacggggactgccggcgcttccgcggcagcctgtcctcgctg
gccagccggcacctgcacgacgcggccgagggcaggcggctcatcgggggcgagggggag
gcggcctcccccggcgaggagcggagccccccgggcgggggggagccccagctcccgccg
gcccccgcccggtcccccccgccggcgccgcaggccctgcccgcctccgcctccatcaaa
gtggaaggcggggcggggggcgaccagatcaccccggacgaggagctgcggctgggccag
gcaggcttcatgcagcgccagttcggggccatgctccagccgggggtcaacaagttctcg
ctgaggatgttcggcagccagaaggcggtggagcgggagcagcagcgggtcaagtccgcc
gggttctggatcatccacccctacagcgacttcagattctactgggatctgaccatgcta
ctcctgatggtgggaaacctgatcattatccctgtgggcatcactttcttcaaggacgag
aacaccaccccatggatcgttttcaatgtggtctcagacaccttcttcctcattgacctg
gtcctcaacttccggaccggcatcgtggtagaggataacactgagatcatccttgacccc
caacgaattaagatgaagtacctgaagagctggtttgtggtggattttatctcctccatc
cctgtggactatatcttcctgattgtggagacccgtatcgactcagaggtttacaagact
gcccgggctctgcgcatcgtgcgcttcaccaaaatcctcagccttttgcgtctgctaagg
ctctccaggctcatccgctacatccaccaatgggaggagatattccacatgacctatgac
ctggcgagtgcggtggtgcggatcgtgaacctgattggaatgatgctgctgctgtgtcac
tgggacggctgccttcagttcctggtgcccatgctacaggacttccctgaagattgctgg
gtgtccctcaatcgcatggtgaatgattcctgggggaagcagtattcctatgcgctgttc
aaggcaatgagtcacatgctgtgcattggctatgggcagcaggctcccgttggcatgtca
gatgtgtggctcactatgctgagcatgatcgttggtgccacttgctatgccatgttcatc
ggccacgccacagccctcatccagtctctggactcctcaaggcggcaataccaggagaag
tacaaacaagtggagcaatacatgtccttccacaagctccccgccgacatgcgccagcgg
atccatgactattatgagcaccgctaccagggcaagatgtttgatgaggacagcatcctg
ggagaactgagtgagcccctgcgtgaggaaatcataaacttcaactgccggaagctggtg
gcatccatgccgctgtttgccaatgcagatcccaactttgtgacatccatgctgaccaaa
ctgcggtttgaggtgttccagccgggggattacatcatccgggagggcaccattggcaag
aaaatgtacttcatccagcacggcgtggtgagcgtgcttaccaaaggcaacaaggagact
aaactggcagatggctcctattttggagaaatctgcctgttgacccgtggccggcgcacg
gcaagcgtgcgagctgacacttactgccgcctctactccctctcagtggacaacttcaac
gaggtgttggaagagtatcccatgatgagaagggcttttgaaacagtggcgctggacagg
ctggatagaattggtaagaaaaattccatcctactacataaagtccagcatgacctcaac
tctggtgtcttcaactatcaggagaacgagatcatccagcagattgtgcagcatgacaga
gagatggcacattgtgctcacaatgtccaggctgctgcagcagcagcttccacaccaacc
cccgtcatttggactccactgatccaggcgcccttgcaagctgcagcagccaccacttca
gtagcaatagctctgacccaccacccgcgtctcccgacggctatattccgtcctccagta
tctgttttggggtctttgggacagccatccagccagacaccgagacaactgaaaaggctt
cagtctattatatcatcatctggtccttctgcagtaggttctccatccagcacgctatcc
cagctgcacactccaggagctgaaaccccttcatcatcttccttccaaatccagcagctg
gcaggattcacagcctctgctggcttaggccagttccatcaggcctcagttggatctcct
tcccctggctcaagccaacagtgcttgggtggcacatcatcagcaggattgaaccagttt
caacaggcgcctttaggggcaattcagcagcaaccactttccagcaacactctgcctagt
gggtttggccacttccagcaggccaccactagctctccacctacttccttcacccagttc
tcatcaaactcacctagcaatcttctcaaccaattccagcccaccacccccagaccacca
caggtgggacagttacagccactcacgggaagtggaactttgggaggaatgaaccacttt
caaccccctccttcttccagttctccatcctctagcttaagccagctggcacaagcatct
ggaggctccctttcagggctgtgccaaatacaaccaagtgcattaggttctgcaactggg
acgataggccagctgcaccaggaaaggtcaccttttgcctccatgtctccattgcagcag
cctggtgtagcctccccttgttacacccattctggccttagtcctcctagtcagagccca
gaggccacaagaactttccaatgtggcccttccagggcctctggctctcatggatctttg
ctcatgcctcagacctccagcccacctccactggtccttcaacccaagagctctccacat
ttgccaccaagacacctgagccaggacatcaggttgatttctgcttcccaaccatctttg
ccccaagaattggctcaaactctgagccaaagttctcctctttcctctagagagtctgtt
ctgagcttctttcctttctctgggggagggtctagacttctcaggaagccgtgtagctct
attcctggacgcatgactttgccacgtcagatgtcctcaggttctctgccacacccgcta
gtgtttggagccagtgctgtcgttgctccctccctgactactggtgggaggaaagaatct
gttgtgctccctggggagctagaacctgtcagatccaaactgccctccaatttatga
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