Dermochelys coriacea (leatherback sea turtle): 119863673
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Entry
119863673 CDS
T09064
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119863673 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcc03019
]
119863673 (BARD1)
04121 Ubiquitin system [BR:
dcc04121
]
119863673 (BARD1)
03036 Chromosome and associated proteins [BR:
dcc03036
]
119863673 (BARD1)
03400 DNA repair and recombination proteins [BR:
dcc03400
]
119863673 (BARD1)
Messenger RNA biogenesis [BR:
dcc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
119863673 (BARD1)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119863673 (BARD1)
Chromosome and associated proteins [BR:
dcc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119863673 (BARD1)
DNA repair and recombination proteins [BR:
dcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
119863673 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
zf-C3HC4_2
NIBRIN_BRCT_II
zf-C3HC4
zf-C3HC4_4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
119863673
NCBI-ProteinID:
XP_038278347
LinkDB
All DBs
Position
11:complement(69355868..69419573)
Genome browser
AA seq
805 aa
AA seq
DB search
MRAALGARSGNQPAPAGRAAAAPRGMERPAGSWDSTRAALRQLERRLRCSRCINILKEPV
CLGKCEHVFCLACVGDCVGTECPVCHTPAWVQDVQINRQLDNMIQLCSKLRHLLGKDFTD
SVEDLFASVGPDHETRNKKRQIKMWFSPRSRKIRCVLNNSSLQKQNQLVTNGGSIHQGPS
STFDFLPSPPQEKPSKMTKEPPPHRSKKKLKKKSLAHINQVWGIEKEKQKKGSGTEGETQ
DEFKEKSVTFCSQPLVLCSPEPNNMEETIGQESVMETDRKDGSESHLEMAIRVKPTEDKD
SSAQVNTVNGFNTEKPLPSENEITPLKRRRQQSISPTVCHSKRLRRSDQSADTHSVNQGV
CNPAVTAMSTIKISPTIKHGTPVHISSPAFKLTGGTVSKTRSSAIFQEINSPSLSKTPST
PFISNTHNQMETTRSPSLLKKSPSNNRTTKRNHRGETLLHVASIKGDVSAVEHLLKNGAD
PNVKDHAGWTPLHEACNHGHKKVVELLLQHRALVNTTGYQNDSPLHDAAKNGHMSIVELL
LSHGASQDAVNIFGLRPVAYAETEKMKSVLMLPMKNESYSFSQCGEQASPGHPREGPVVL
LGSSLNSEQQKSLSKLAAVLKARKCVEFNSTVTHIVIADDPMRSTIKGMLAILAGCWVLK
FEWVKACLQRRIHEQEEKYEICGGPRRGRLNQEQLLPKLFDGCYFYFWGTFNHHQKNDLI
ELVKAAGGQILIRQPKPDSDVTQTINTVAYHAEPGSDQSFCTQYVIYDVSSKYNPDKIRQ
GKVWMAPSSWLIDCVMSFQLLPVTK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgcgctgggggctcgctccgggaaccagccggctccggcagggagggccgcg
gccgcgccgcgcggcatggagcggcccgccggctcctgggacagcacccgggccgccctg
cggcagctggagaggcggctgcgctgctcccgctgcataaacatccttaaggaacctgtg
tgcttgggaaaatgtgagcatgtcttctgtctagcttgtgtgggggactgtgttggcaca
gaatgcccagtgtgtcacactccagcctgggtacaagatgtgcaaataaataggcagcta
gacaacatgatccagctgtgcagcaaactgcgtcatctactgggcaaggacttcacagat
tctgtagaagacttgttcgcatcagtaggtcctgatcatgaaacaagaaataagaagagg
cagataaaaatgtggttcagcccacgcagtaggaagatcagatgtgtgctaaacaatagt
tcccttcagaagcagaatcagctggtgactaatggtggtagcattcaccagggcccatct
tctacttttgacttccttccttctcctcctcaagagaagccttccaagatgaccaaggaa
ccaccaccacacagatcgaagaaaaagctgaagaaaaagagtctagcacacatcaaccaa
gtatggggtatagagaaggaaaagcagaaaaagggcagtggaactgaaggggagacccaa
gatgaatttaaagaaaagtctgtgaccttttgcagccagccattagttttatgcagtccc
gaaccaaataatatggaagagacaataggacaggagtctgtaatggaaaccgaccgtaag
gatggaagtgagtcccacttggaaatggccatacgagtaaaacccacagaggataaagat
agctctgcacaagttaacacagtgaatggttttaatacagagaaacctctgccatcagaa
aatgaaattactcctttaaagcgcagaaggcagcaatccatatcccccactgtatgtcat
tctaaaagactgagaagaagtgaccagagtgctgatacacactcagtcaaccaaggtgtt
tgcaatcctgcggtaactgccatgagcactattaaaatctctccaactattaaacatgga
actccagttcatatctcctctcctgcatttaaacttactggtggcactgtatcaaagaca
agaagctctgcaatttttcaagaaataaatagcccttcactttcaaaaactccctctacc
ccattcatttcaaatactcataatcaaatggaaaccacacgcagtccttccctcttgaag
aagtctcctagtaataacagaactaccaaaaggaatcacagaggagagaccttgctccat
gttgcttcaatcaagggtgatgtatcagccgttgaacacttactgaaaaatggagcagac
cccaatgttaaagaccatgctggatggacgccattgcacgaggcttgtaatcacgggcac
aagaaggtggtggagctattgctacagcaccgggcattggtgaacactactgggtatcag
aatgactcaccgcttcatgatgctgccaagaatgggcatatgagcattgttgagctgttg
ctctcacatggagcctcccaggatgcagttaatatattcggtctgcgccctgtggcctac
gcagaaactgaaaagatgaagtctgtgctaatgctaccaatgaagaatgaatcatattca
tttagtcaatgcggggaacaagcaagcccaggccaccctagagaagggcctgttgtttta
ctgggaagcagcctcaattcagagcaacaaaaatcactgagcaaactcgcagcagttctg
aaggctagaaaatgtgttgagtttaacagcacagtgactcacatcgttatcgctgatgat
ccaatgcgaagtactatcaaaggcatgctggccattctggctggatgttgggtcctgaaa
tttgagtgggtgaaggcatgtttgcaaagaagaattcatgaacaagaggagaagtatgaa
atctgtggtggcccacgaagaggcagactcaaccaagaacagctgctgcctaagttgttt
gatggttgttacttctatttttggggaactttcaaccaccaccagaagaatgatctcata
gagctggttaaagcagcaggaggacaaatcctcattaggcagccaaagccagatagtgac
gtgacacagaccatcaacacagtggcataccatgccgaacctggttctgaccagagtttc
tgcacacaatacgttatctatgatgtgtcttctaaatacaacccagataaaattcgccaa
ggcaaagtctggatggccccctccagctggcttatagactgtgtgatgtcatttcagctg
ttacctgttacaaagtga
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