Dermochelys coriacea (leatherback sea turtle): 122456802
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Entry
122456802 CDS
T09064
Symbol
PUS1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcc03016
]
122456802 (PUS1)
Enzymes [BR:
dcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
122456802 (PUS1)
Transfer RNA biogenesis [BR:
dcc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122456802 (PUS1)
Prokaryotic type
122456802 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
122456802
NCBI-ProteinID:
XP_043354038
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All DBs
Position
15:complement(19261114..19278357)
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AA seq
479 aa
AA seq
DB search
MGAGRGKVSDPDRAASFLSGLGPRGGPAPQLGWGDPSWAPDVRKKGEKLEKAQRSAAQTS
KGLGYVTYEGGVKKRGLWFAMAGDMRATAASQAKRFKSSSEETENQEENGHQDKRFKRSQ
KDVEDQNKKFPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVRSGCIPENHG
DDMKKMSFQRCARTDKGVSAAGQIVSLKIWLIDDVLEKINNCLPSHIRILGLKRVTGGFS
SKNKCDARTYFYMLPTFAFAHKDRDIQDKTYRLNKETLEKVNKLLACYKGTHNFHNFTSQ
KGPKDPSAKRYIMEIYCEEPFVKEGMEFAVIKVKGQSFMMHQIRKMIGLVIAVVKGYALE
SIMERSWGEEKVDVPKAPGLGLVLEKVHFEKYNRRFGNDGLHEPLEWTEEEEKIAVFKEQ
HIYPTIINTEREEQSMVNWLSTLSIHDFSATSSGVQVNDRNSKSNDLEGSDGGCDDDSD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagggagggggaaagtgtctgatcctgatcgtgcagcttccttcctttcaggg
ctaggtcctcgcgggggtccagcgcctcagctgggctggggtgacccgtcctgggcgcca
gatgtcaggaaaaagggggagaaattggagaaagcccagaggagcgcagcacaaacgagt
aaaggtctaggatacgtgacctatgagggaggagtgaaaaagcgaggcttgtggtttgca
atggctggggatatgagagcaacggctgccagtcaggcaaaaagatttaagagcagcagt
gaggagacagaaaaccaagaggaaaatggacaccaagacaaaaggttcaagagaagccaa
aaggatgtggaggatcagaataaaaaatttcccaaaaggaagattgttctgttgatggca
tattctgggaaaggctaccatgggatgcaacgaaacgtggggtcctcgcagttcaagacg
atcgaggatgacttagtatctgccctcgttcggtcagggtgcatcccagaaaaccacggt
gatgatatgaaaaaaatgtcctttcagaggtgtgcgcgaacagacaagggcgtgtctgcc
gctggacagattgtgtcactgaagatctggctgatagatgacgttttagaaaagatcaat
aactgtcttccttctcatatcagaattctgggactgaaaagagtaaccgggggattcagc
tccaagaacaagtgtgatgccagaacctacttctacatgctaccaacatttgcctttgcc
cataaagaccgtgatatccaagacaaaacttaccgtctgaacaaagagactcttgagaaa
gtcaacaagcttcttgcttgctacaaagggacccataacttccacaacttcacttctcag
aagggacccaaagaccccagtgccaaacggtacatcatggagatatattgcgaagagccc
tttgtgaaggagggcatggaatttgctgtgataaaggtgaaaggacagagttttatgatg
caccaaataaggaagatgattggtttggtgatagctgtagtgaaaggctatgcactggag
tccatcatggagcgcagctggggagaggaaaaggtggatgtccccaaagctccagggctt
gggctggtcttggaaaaggtgcactttgaaaagtacaatagacgctttggaaatgatggt
ttacatgagccactggaatggacagaggaggaggagaagatcgctgttttcaaagagcaa
catatctatcccactattatcaacactgaaagggaggagcaatccatggtgaactggctg
agcacgctctccatccatgacttcagtgctacttcttcaggggtacaagtcaatgacaga
aactcaaagagcaacgatcttgaaggcagtgatggtggttgtgacgatgactctgactga
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