Dermochelys coriacea (leatherback sea turtle): 122461188
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Entry
122461188 CDS
T09064
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcc03041
]
122461188
Spliceosome [BR:
dcc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122461188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
TPR_17
TPR_MalT
TPR_11
HH_EMRA
Motif
Other DBs
NCBI-GeneID:
122461188
NCBI-ProteinID:
XP_043375707
LinkDB
All DBs
Position
7:32309078..32334716
Genome browser
AA seq
749 aa
AA seq
DB search
MAAEGLEAAGSSSCGGAGNERALGGGSEGGESGRDVGGPNQDLLPKPPSDSTSKQEDTKA
VQGCNGVNAEASMSGLKDPYASEENCPYPASEEEHAAVATPVAVEEASLSYPLEFEKYWK
AAQENPHDFTAWTELLQYVEQENHIFAARKAFDAFFARYPYCYGYWKKYADMERRFDFSK
ETEEVFERGLQSIPLSMDLWIHYISYLQATLDMNLPESIQKIHSVFESAVAAAGMDFRSD
KLWEMYVEWEKEQGDLKAITAIYDRVLSTPTQLYSHHWEKFKEHVMSNSPKDILSAEELL
WLQSKITTETVQKSVETEVEEVPPGEDLPPGVEVKPETGADAQVPHFSASYPNDADFDSY
SELTSAVRGDLNQDKIRELVISIRQQVYTQNEAEVSKRWNFEEGIKRPYFHVKPLERAQL
KNWRDYLDYEITNGSHERTIVLFERCVIACALYEEFWIKYTKYLENHTVAGARSVFQRAC
GYHLPRKPNIHLLWAAFEEKQGDLEEARRILKSYEESIPGLAMVRLRRVSLERRHGNLEA
AEALLQEAIRDNEGMPLASFYAIKLARQVLKVQKNLIKARKVLMEALEKDPENAKLYTNL
LEIEFSADVRQNEGNTMNCFERALSSGLPEETKIVFSQRRVEFLEDFGSSIHSLLTAYDE
HQKFLKHQMTRKRAPENGCTDEPEDKKLRAEDSPGMVSPAVTTAGIAPLMGGDMSTNPGA
AYNYSTWYQNYGVYGYQNPWNYSQYYSQS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgaggggctggaggcggcggggagctcaagctgtggcggagccgggaacgag
agggccctcggcgggggaagcgagggcggggagagcggccgggacgttggcggtcccaac
caagatttgctcccaaaaccgccaagtgacagtaccagtaagcaggaagacaccaaagca
gtgcaagggtgcaatggagttaatgctgaagccagcatgtcagggctcaaggacccatat
gcaagtgaagagaactgtccatatcctgcctccgaggaagaacacgcagcagtggctacc
cctgtggcagtggaagaagcctccctctcataccctctggagtttgagaagtactggaag
gcagctcaggagaatcctcatgacttcacggcatggaccgaactgctgcagtatgtggaa
caagagaatcacatctttgcagcacgaaaagcctttgacgccttttttgctcgctacccc
tactgctacggctactggaagaagtatgcagacatggagaggcgcttcgacttcagcaag
gagacagaagaggtgttcgaacgagggctgcagtccatccccctcagcatggacctctgg
atccattacatctcttacctacaggccaccttagatatgaaccttcctgagtccatacag
aagatccacagtgtgtttgaatcagccgtggctgctgcaggaatggacttccgctcagac
aaactgtgggagatgtatgtggagtgggagaaggagcaaggtgatctgaaggccatcaca
gccatttatgaccgagtgctctccacaccgacccagctgtacagccaccactgggaaaag
ttcaaggaacatgtgatgagcaactcccccaaagacatcctatctgcagaggagctgctc
tggttgcaatccaagatcaccacggagacggtacagaaaagtgtggagacagaggtggag
gaggtgccacctggggaagacctgcctccgggggtggaagtgaagccagaaacaggagct
gatgcccaggtaccacacttttcagcctcctacccaaatgatgcagactttgacagttat
tctgagctgacatctgctgtcaggggagacctgaaccaggacaagatccgggagctcgtt
atctccatccggcagcaagtgtacacccagaatgaggcagaagtcagcaagcgctggaat
tttgaggaagggatcaagaggccatacttccatgtcaagccgctggaaagagcacagctg
aagaactggcgcgactacctggactacgagattaccaatggctcccacgagcgcaccatt
gtgctttttgagcgctgcgtcattgcctgtgccctctacgaggagttctggatcaagtac
acgaaataccttgagaaccacactgtggctggggccaggagtgtcttccaacgagcttgt
ggctaccatctccccaggaagcccaacatccacctcctgtgggctgcatttgaagagaag
caaggagacctggaggaggcacgtcgcatcttgaagtcttatgaggagtccatcccaggg
ctggctatggttcggctgcggagagtgagcctggagcggcgacacggcaacctggaggca
gctgaggctctgctgcaggaagccatacgggacaatgaggggatgcccctggcttcattc
tatgccatcaagctggcccgacaggtgctgaaagtgcagaagaatctaataaaggctcgg
aaggttctcatggaagcactagagaaagatccggaaaatgcaaagctctacaccaacctc
ctggagatagagttcagtgccgatgtcaggcagaatgaaggcaacaccatgaactgcttt
gaaagagcgctgagcagtggcctccctgaggagaccaagattgtcttctcacagcgcaga
gtggagttccttgaggactttgggtccagcatacacagcttgctgacagcgtatgatgaa
caccagaagttcctcaaacaccagatgaccaggaaaagagcccctgagaatggctgcact
gatgaaccagaagacaaaaagctgagagctgaggactctcctgggatggtcagccctgca
gtcactactgcaggcatcgcaccactgatgggtggagatatgagtaccaatccaggagct
gcttataactacagcacctggtatcagaactacggcgtctacgggtatcaaaatccatgg
aactacagccaatattactctcagagctga
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