Dietzia cinnamea: VYL96_00025
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Entry
VYL96_00025 CDS
T10417
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dcd Dietzia cinnamea
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcd03032
]
VYL96_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
dcd03400
]
VYL96_00025 (gyrB)
Enzymes [BR:
dcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VYL96_00025 (gyrB)
DNA replication proteins [BR:
dcd03032
]
Prokaryotic type
DNA Topoisomerases
VYL96_00025 (gyrB)
DNA repair and recombination proteins [BR:
dcd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VYL96_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WVF63527
LinkDB
All DBs
Position
5176..7308
Genome browser
AA seq
710 aa
AA seq
DB search
MADARSTADNGGAKEYGASSITVLEGLEAVRMRPGMYIGSTGPRGLHHLIWEVVDNSVDE
AMAGHATGVKVTLLEDGGVEVIDDGRGIPVEMHESGMPTVQVVMTQLHAGGKFDSDSYAV
SGGLHGVGISVVNALSTRVEVQIKRDGRLWKQDFDMAEPAELVDAGPAEGTGTKVRFWAD
PSIFETTEYDFDIVARRLQEMAFLNKGLTITLTDRRPRAEKAAELDAIADSEGVGPDSAP
GSDEGSDLASAVDAEQVFVEGAGEGGGEGGEAAAEPEKIRERKRTFHYPDGLKDYVKAIN
KSKTAIHPTILYFEGKGTGHEVEVAMQWNSGYSESVHTFANTINTHEGGTHEEGFRAALT
SLVNKYARDKKLIKEKDPNLTGDDIREGLAAVISAKIADPQFEGQTKTKLGNTEVKGFVQ
RQVAEHVGHWFEANPAEAKVIVNKAIASSQARVAARKAREMVRRKSATDIGGLPGKLADC
RSKDPSKSELYIVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKSRIDKVLKNAEVQAI
ITALGTGIHEEFDIDKLRYHKIVLMADADVDGQHIATLLLTLIFRFMKPLVENGYVYLAQ
PPLYKLKWSKGEPDFAYSDRERDELLKIGLENKRKINVDDGIQRYKGLGEMNPKELWETT
MDPSVRTLRQVTLEDAAAADELFSILMGEDVDARRNFITRNARDVRFLDV
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtggcggacgccaggagcacggccgacaacggcggagccaaggaatacggcgcttcatcg
atcacggtcctcgaggggctcgaggccgtccggatgcggccgggtatgtacatcggctcc
accggaccgcggggtctgcaccacctgatctgggaggtcgtcgacaactccgtcgacgag
gccatggcgggtcacgcgaccggagtcaaggtcaccctcctcgaggacggtggcgtcgag
gtcatcgacgacggccgcggcatcccggtggagatgcacgagtcgggcatgcccaccgtc
caggtcgtcatgacccagctccacgcgggcggcaagttcgactcggactcctacgcggtc
tccggtggtctccacggcgtgggcatctcggtggtcaacgcgctgtcgacccgcgtcgag
gtccagatcaagcgcgacggtcgcctgtggaagcaggacttcgacatggcggagccggcg
gagctggtcgacgccgggcccgccgagggcaccggcaccaaggtccggttctgggccgat
ccatcgatcttcgagaccaccgagtacgacttcgacatcgtcgcccgtcgcctgcaggag
atggcgttcctcaacaagggactgaccatcacgctgaccgaccgtcggccgcgcgccgag
aaggcggcggagctcgacgcgatcgcggacagcgagggcgtcggcccggactccgcaccg
ggctcggacgagggctcggatctggccagcgccgtggacgccgagcaggtcttcgtcgag
ggcgccggcgagggcggcggcgagggcggcgaggcggcggccgagcccgagaagatccgc
gagcgcaagcggaccttccactacccggacggcctcaaggactacgtcaaggcgatcaac
aagtccaagaccgcgatccacccgacgatcctgtacttcgagggcaagggcaccggccac
gaggtcgaggtcgccatgcagtggaactccgggtactcggagtccgtccacaccttcgcc
aacacgatcaacacccacgagggcggcacccacgaggagggcttccgtgcagcgttgacc
tcgctggtcaacaagtatgcccgggacaagaagctcatcaaggagaaggaccccaacctc
acgggtgacgacatccgcgagggtctcgcggccgtcatctccgccaagatcgcggacccg
cagttcgaggggcagaccaagaccaagctcggcaacaccgaggtcaagggcttcgtccag
cggcaggtggccgagcacgtcggtcactggttcgaggccaaccccgccgaggccaaggtg
atcgtcaacaaggccatcgcctccagtcaggcacgcgtcgccgcccgcaaggcccgcgag
atggtgcgccggaagtcggcgaccgacatcggtggactgcccggcaagctcgcggactgc
cggtccaaggacccgtcgaagtccgagctctacatcgtggagggtgactcggccggtggt
tcggccaagtccggtcgcgactcgatgttccaggcgatcctgccgctgcgcggaaagatc
atcaacgtcgagaagtcgcggatcgacaaggtcctcaagaacgccgaggtccaagccatc
atcacggcgctgggcaccggcatccacgaggaattcgacatcgacaagctgcggtaccac
aagatcgtgctgatggccgacgccgacgtcgacggccagcacatcgcgacgctgctgctg
acgctcatcttccgcttcatgaagccgctcgtggagaacgggtacgtctacctcgcgcag
cccccgctgtacaagctcaagtggagcaagggcgagccggacttcgcgtactcggaccgc
gagcgcgacgaactgctcaagatcggcctggagaacaagcgcaagatcaacgtcgacgac
ggcatccagcgctacaagggcctcggcgagatgaacccgaaggagctgtgggagaccacg
atggacccgtcggtccgcacgcttcggcaggtcaccctcgaggacgccgcggcggccgac
gagttgttctcgatcctcatgggtgaggacgtggacgcgcgccgcaacttcatcacccgc
aacgcccgcgacgtccgcttcctggacgtctga
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