Dietzia cinnamea: VYL96_01595
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Entry
VYL96_01595 CDS
T10417
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
dcd Dietzia cinnamea
Pathway
dcd00074
Mycolic acid biosynthesis
dcd01100
Metabolic pathways
dcd01110
Biosynthesis of secondary metabolites
Module
dcd_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
VYL96_01595 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dcd01004
]
VYL96_01595 (pks13)
Lipid biosynthesis proteins [BR:
dcd01004
]
Polyketide synthase
Modular PKS
VYL96_01595 (pks13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
RhiE-like_linker
Abhydrolase_1
Thiolase_N
CurL-like_PKS_C
Abhydrolase_3
Motif
Other DBs
NCBI-ProteinID:
WVF63814
LinkDB
All DBs
Position
355229..360304
Genome browser
AA seq
1691 aa
AA seq
DB search
MAQSEMTVVELREWLRGWVCRATGLDISKVTDDRSLEEYGLSSRDAVSLSADLEDLIGRP
LDATVAYQHPTIASLAEYVVNGPVEADEPTDLHTFRERGAGMEFDVAVIGLATRFPGGAD
SPEATWDLLASARDATTPRPDGRWSEWAGDAYVQQVLAEAPNRGGWLDDTEVKDFDAEFF
GMSPREAEMVDPQQRLALELTWEALENAHIPASDLKGREVGVFMGSSSSDYQVLLTSDSA
AASPYAVTGASNSIISNRISYTFDFRGPSMTLDTACSTSLVAIHEAVNSLRLHESDLVVA
GGVNMMLAPAATMGFAKTGAALSPDGRIKAFSSDANGICRAEGGGVFILKRLSEAERDGD
EILAVIKGSAVNSDGRSNGMTAPNPDAQVSVLRQAYADAGVDPREVDYIEAHGTGTILGD
PIEATALGQVLGRGRDADRPTLLGSAKTNFGHMESAAGAAGLAKIILGMQHDAVPPTINY
AGPNPYIDFDAARLSVVTETTPWPRYSGRAVAGISGFGFGGTNAHVVVAEYRPQPAHVVV
DAPSDTSAGAPADTDPTAETTPATATPAPATTGSATDDDVARCVADAVARNADELATTGT
SAPGAPATVLVVSASLPSRRKATAGQVADWLEAQDDSIDLGAVARTLATRNHGRSRGAVV
GHTRAELVAGLRALAAGDPGPGVFSADAPAGTGDVWVFSGFGSQHRKMAKELYLSNPLFA
SCLDAVDELIDFEAGYRIVELILDDSQTYELENSQVGIFAIQVALVDTLRALGAKPEAVI
GHSMGEVAAAYATGGLGLEDAVRVITVRSRLMGDAEGQVSEEEAGAMALVEYSAEEIAQI
IADNPQFASIEPAVYAAPTHTTVGGRAKPVADFVAWVEEQGKFARQLQVRGAGHTSDVDM
LLGELAAEIAGLEPRELTSGLFSSVDRETFYRAGHEPVHAEEYWVKGMRHSVWFTHAVRK
AVDAGYVTFLELAPNPVAAMSVAATCFDAGLMEPNLLHTLKRKESEADTLLHAIAQLYVH
GHTIDMPSVVEMIHGYVTGPDRYAPVPGTAWKRRTLWPKVTAGGGSGDGRMPGSYVALPD
GRHAWQVRAEVVPSVDALMSAAAAAVIEGATLTAVDRPGVLPASGSVTTTLTPHPGGASL
QVHARSDEESASFVMVASGAVSGGAPIDPSTAPEMPHFESDESDAPVVGEDDDDEADTRW
NPASGESISDRLARIIGSSMGYSPDDLPRELALLDLGLDSLMAVRIKNRVEHEFSIPPLE
LQAMRDASLNDVAEMVRFAVENPEQVGELAAQQARGEGAVDVAALRDGDAADGSGAADPD
GAAPAGDAVSVAPRDDTERMAFGAWAVVTGAAAPGVTGTLPQLDEATRSTLAERLSARSG
GDISAEQVAGASTIAELADLLRPFTEVAVEGNIRVLAEGSDQRTPLFLFHAAGGSSFVYE
PLVDRLGADTPVYGVERVEGPLEERAASYLERIRELAAGRPVAVGGWSFGGALAVEVARQ
LRAAGDDVSLVVLLDTVQPSEPIPDTLDEAEARWKRYSEFAKRTYGLDVEVPRDFLAEHG
EDGVLEMLLGALGAEANAMGGGVIEHQRASFVDNRILQSADMGSWAGVGAEVPFVLYRAE
RMHDGAIELEPRYERIDPDGGWAAVVTDLEVVHLEGDHLAMVDEPVVGTVGKHLARRLTE
LDAGVRKGTNA
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggcacagagcgagatgacggtagtggagctccgcgaatggctgcggggctgggtctgc
cgggccaccgggctcgacatctccaaggtgaccgacgaccgctcgctggaggagtacggc
ctgtcgtcccgcgacgcggtgtccctgtccgccgacctcgaggacctcatcggccggccg
ctggacgcgaccgtcgcctaccagcaccccaccatcgcctcgctcgccgagtacgtggtc
aacggtccggtggaggccgacgagcccacggacctgcacacgttccgcgagcgcggcgcg
ggcatggagttcgacgtggccgtcatcggcctcgcgacccgcttccccggcggcgccgac
agccccgaggcgacctgggacctgctggcctccgcacgcgacgccacgaccccgcgcccg
gacggccgctggtcggagtgggcgggcgacgcctacgtccagcaggtcctggcagaggcc
ccgaaccggggcggctggctcgacgacaccgaggtcaaggacttcgacgccgagttcttc
ggcatgagcccccgcgaggccgagatggtcgacccgcagcagcggctcgcgctcgagctc
acctgggaggccctggagaacgcccacatcccggctagtgacctcaagggccgcgaggtc
ggcgtgttcatgggctcgtcgtccagcgactaccaggtcctgctcacgtcggactccgcc
gccgcgtccccgtacgcggtcaccggcgcctccaactcgatcatctccaaccggatctcg
tacacgttcgacttccgcggcccgtccatgacgctggacaccgcctgctcgacgtcgctg
gtcgcgatccacgaggccgtcaactccttgcgcctgcacgagtcggacctcgtcgtggcc
ggtggcgtcaacatgatgctcgcgcccgccgccaccatgggcttcgccaagaccggcgcc
gcgctcagccccgacgggcgcatcaaggcgttctcctccgacgccaacggcatctgccgc
gccgaaggcgggggcgtgttcatcctgaagcgcctgtccgaggccgaacgggacggcgac
gagatcctcgccgtcatcaagggctccgccgtgaactcggacggtcgctccaacggcatg
accgcccccaaccccgacgcccaggtctccgtcctgcgccaggcctacgccgacgccggc
gtggacccgcgcgaggtcgactacatcgaggcccacggcaccggcacgatcctcggcgac
cccatcgaggccaccgccctgggccaggtgctcggccgcggccgcgacgccgaccggccc
acgctcctgggctcggccaagaccaacttcgggcacatggagtccgccgccggcgccgcc
ggcctggccaagatcatcctgggcatgcagcacgacgccgtgccgcccacgatcaactac
gcgggccccaacccgtacatcgacttcgacgccgcccggctcagcgtggtcaccgagacc
accccgtggccgcgctacagcggccgcgcggtcgccggcatctccggcttcggcttcggt
ggcaccaacgcgcacgtcgtggtggccgagtaccggccgcagccggcccacgtcgtcgtc
gacgccccgtctgacacctctgccggcgccccggccgacaccgacccgaccgcggagacc
acccccgcgacggccacccctgcgccggccaccaccgggtcggccacggatgacgacgtc
gcccgctgcgtggccgacgccgtggcgcgcaacgccgacgagctcgccacgaccggtacc
tccgcgcccggtgcccccgccaccgtcctggtcgtgtccgcgtcccttccgtcgcgccgt
aaggccaccgccggacaggtcgcggactggctcgaggcgcaggacgactcgatcgacctc
ggcgccgtcgcccgcaccctggcgacgcgcaaccacggccgctcgcgcggcgcggtcgtc
ggccacacccgcgccgagctcgtcgccggactgcgcgcactcgccgccggcgacccgggc
cccggagtgttcagcgccgacgcccccgccggcacgggcgacgtgtgggtgttctccggc
ttcggctcccagcaccgcaagatggccaaggagctgtacctgtccaacccgctgttcgcc
tcgtgcctggacgcggtcgacgagctcatcgacttcgaggccggctaccggatcgtcgag
ctgatcctggacgactcccagacctacgaactcgagaactcccaggtcggcatcttcgcg
atccaggtggcgctcgtcgacaccctgcgcgcgctcggcgccaagcccgaggccgtcatc
gggcactccatgggtgaggtcgccgccgcctacgcgaccggtggcctgggcctcgaggac
gcggtgcgcgtgatcaccgtgcgctcgcgcctcatgggcgacgccgaggggcaggtctcg
gaggaggaggccggcgcgatggcgctggtcgagtactcggccgaggagatcgcgcagatc
atcgccgacaacccgcagttcgcctccatcgagcccgccgtctacgccgcgcccacccac
accacggtcggcggccgcgccaagcccgtcgccgacttcgtcgcgtgggtcgaggagcag
ggcaagttcgcccgtcagctgcaggtccgcggtgccgggcacacctcggacgtcgacatg
ctcctcggcgagttggccgcggagatcgccggcctcgagccgcgcgaactcacctccggg
ctgttctcctccgtcgaccgcgagaccttctaccgcgccggccacgagccggtccacgcg
gaggagtactgggtcaagggaatgcgccactcggtgtggttcacccacgccgtgcgcaag
gccgtcgacgccgggtacgtcacgttcctcgagctggcccccaacccggtggccgcgatg
tcggtggccgccacgtgtttcgacgccggtctcatggagccgaacctcctgcacacgctc
aagcgcaaggagtccgaggccgacacgctcctgcacgcgatcgcgcagctgtacgtccac
gggcacacgatcgacatgccgagcgtcgtggagatgatccacggctacgtgaccggcccc
gaccggtacgcgccggtgccgggcaccgcgtggaagcgccgcaccctgtggcccaaggtc
accgcgggcggcgggtccggcgacggccgcatgccggggtcgtacgtcgcgctgcccgac
ggccgccacgcgtggcaggtccgcgccgaggtcgtgcccagcgtggatgcactgatgtcc
gccgcggccgccgcagtgatcgagggcgcgaccctcaccgccgtcgaccggcccggcgtc
ctgcccgcctcggggtcggtcaccacgaccctcaccccgcacccgggtggggcgtccctg
caggtccacgcccggtcggacgaggagtccgcgtcgttcgtgatggtcgcctccggtgcg
gtcagcggcggcgcgccgatcgatccgtcgacggcgccggagatgccgcatttcgagtcg
gacgagtccgacgcgccggtggtcggcgaggacgacgacgacgaggccgacacccgctgg
aaccccgcctccggcgagtcgatcagcgacaggctcgcccggatcatcggctcctcgatg
gggtacagccccgacgacctgccgagggagctggcactgctcgatctcggcctggattcg
ctcatggccgtgcgcatcaagaaccgcgtcgagcacgagttctccatcccgccgctcgag
ttgcaggccatgcgtgacgcgtcgctgaacgacgtcgcggagatggtccggttcgcggtg
gagaacccggagcaggtcggcgagctggcggcccagcaggcccgcggtgagggagcggtc
gatgtcgcggcgctgcgcgacggcgacgccgccgacggctcgggtgcggctgaccccgac
ggcgcggccccggccggcgacgccgtgtccgtcgccccgcgcgacgacaccgagcgcatg
gcgttcggcgcgtgggcggtggtgacaggcgcggccgcacccggtgtcaccggcactctg
ccgcagctcgacgaggcgacccggagcacgctcgccgagcggctgtccgcccgctccggg
ggcgacatcagcgctgagcaggtggccggtgcctcgacgatcgccgagctggccgatctg
ctccggccgttcaccgaggtggccgtcgagggcaacatccgcgtgctggccgagggctcg
gaccagcgcacgccgctgttcctgttccacgcggccgggggttcgtcgttcgtctacgag
ccgctggtcgaccgactcggggcggacaccccggtgtacggcgtcgagcgggtcgagggg
ccgttggaggagcgtgccgccagctacctggagcgcatccgcgagctcgcggcgggccgt
cccgtcgcggtcgggggatggtcgttcggcggcgctctggcggtcgaggtggcccgccag
ctgcgggccgcgggcgacgacgtgtcgctggtggtcctgctggacaccgtgcagccgtcc
gagccgatcccggacacgctcgacgaggccgaggcccgctggaagcggtactcggagttc
gccaagcggacgtacgggctcgatgtggaggtgccgcgcgacttcctggccgagcacggt
gaggacggggtcctggagatgctgctcggcgcgctgggtgccgaggccaacgcgatgggc
ggcggcgtgatcgagcaccagcgggccagcttcgtggacaatcgcatcctgcagagcgcg
gacatgggctcgtgggccggcgtcggcgccgaggtgccgttcgtgctgtaccgggccgag
cggatgcacgacggggcgatcgagctggagccgcgctacgagcgcatcgacccggacggc
ggctgggccgccgtggtgaccgatctggaggtggtccacctcgagggggaccacctcgcg
atggtcgacgagccggtggtcggtacggtcggtaagcatctggcgcgtcgactcacggag
ctcgacgcgggcgtacggaagggaaccaacgcgtga
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