Dietzia cinnamea: VYL96_02025
Help
Entry
VYL96_02025 CDS
T10417
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dcd Dietzia cinnamea
Pathway
dcd03030
DNA replication
dcd03430
Mismatch repair
dcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VYL96_02025
03430 Mismatch repair
VYL96_02025
03440 Homologous recombination
VYL96_02025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcd03032
]
VYL96_02025
03400 DNA repair and recombination proteins [BR:
dcd03400
]
VYL96_02025
Enzymes [BR:
dcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VYL96_02025
DNA replication proteins [BR:
dcd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VYL96_02025
DNA repair and recombination proteins [BR:
dcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VYL96_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WVF63887
LinkDB
All DBs
Position
451874..452815
Genome browser
AA seq
313 aa
AA seq
DB search
MSGWVVVDVETSGMTPAVDRVLSVAAVVIGDDGEVVEEFATLLNPGVDPGPVHVHGLTPA
LLAGKPRFQDVAAELGRVLDGRTVVAHNAAFDASFLAAEARRAGLAPPLERFVCTLDFAG
RLHLSTADLKLSTLAAHFGVHQRAAHDAHDDALVLAGVFAGLLEVAAAKDVRPSVRELDA
MVAHPETGYLVSTVWAEALAAPRLWRPAGRLKRGGGLVQGMEVVFTQDVDRDPEEIVSLV
VDAGLYVADRISSRTSLAVCDAPGAVRGRTAFARKKGLELVPCARFQEMLADVAPGRPVA
GAQAVDSAQEALF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttgggtcgtggtggacgtcgagacgtcggggatgacgccggcggtcgaccgg
gtgttgtcggtggccgccgtggtgatcggtgacgacggcgaggtggtcgaggagttcgcg
accctgctcaaccccggggtcgacccggggcccgtccacgtgcacggcctcaccccggcc
ctcctcgccggcaaaccgcgcttccaggacgtggcggccgagttgggccgggtgctggac
gggaggacggtcgtcgcccacaacgcggccttcgacgcgtcgttcctcgccgccgaggcc
aggcgggccgggctcgccccgccgctcgagaggttcgtgtgcaccctcgacttcgccggc
cggctccacctgtcgaccgccgacctcaagctgtccacactggccgcccactttggcgtc
catcagcgggccgcgcacgacgcccacgacgacgccctcgtgctggccggggtgttcgcc
ggtctgctcgaggtggccgccgcgaaggacgtgcgcccctcggtccgcgaactcgacgcg
atggtggcccaccccgagaccgggtatctggtgtccacggtgtgggcggaggccctcgcc
gcacccaggctgtggcgtccggccggaaggctgaagcgcggcggcgggctggtgcagggc
atggaggtggtcttcacgcaggacgtggatcgcgacccggaggagatcgtctccctcgtc
gtcgacgccggtctctacgtggccgaccgcatctcgtcccgcacctcactcgcggtgtgc
gacgcacccggcgcagtgcgcggacgcaccgcgttcgcgcggaagaaggggctcgagctg
gtgccgtgcgcccggttccaggagatgctcgccgacgtcgcccccggccggcccgtcgcc
ggcgcccaggccgtggacagtgcgcaggaggcgctcttctga
DBGET
integrated database retrieval system
