Dietzia cinnamea: VYL96_02480
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Entry
VYL96_02480 CDS
T10417
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
dcd Dietzia cinnamea
Pathway
dcd02020
Two-component system
dcd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VYL96_02480
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VYL96_02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcd03000
]
VYL96_02480
Transcription factors [BR:
dcd03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
VYL96_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
GntR
Crp
HTH_3
Sigma70_r4
MarR_2
wHTH-PRTase_assc
Sigma70_r4_2
HTH_24
HTH_29
HTH_ParB
HTH_IclR
HTH_23
HTH_28
DUF977
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
WVF63972
LinkDB
All DBs
Position
complement(546966..547670)
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AA seq
234 aa
AA seq
DB search
MTIDRRTDQSADDVLTSAGIFQGVEPAAVSALRADLTREEYSKGDVIIREGEQGDSLYIV
TSGKVKLSRKAPDGRENLLSILGPSDMFGELSIFDPGPRTSSAVCVTDVTVQAMDRSALK
RWIAERPEISDQLLRVLARRLRRTNNNLADLIFTDVPGRVAKALLQLAQRFGTQEGGNIR
VTHDLTQEEIAQLVGASRETVNKALAEFAHRGWLRLEGKSVIISDTERLARRAR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgacgattgatcgccgcacggaccagtctgccgacgacgtcctcaccagtgccggaatc
ttccagggtgtggagcccgcggcggtctccgctctgcgtgccgatctgacccgcgaggag
tactcgaagggtgacgtgatcatccgcgagggcgagcagggcgacagcctgtacatcgtc
acctccgggaaggtgaagctgtcccgcaaggcgcccgacggccgcgagaacctgctgtcc
atcctcggtccgtcggacatgttcggcgagctgtcgatcttcgacccgggcccgcggacc
tcgtcggccgtgtgcgtcaccgacgtcaccgtccaggccatggaccgctccgccctcaag
cggtggatcgccgagcggcccgagatctccgaccagctgctgcgcgtgttggcccgccgc
ctgcgccgcaccaacaacaacctggccgacctcatcttcaccgacgtccccggtcgcgtg
gccaaggccctgctccagctggcgcagcgcttcggcacgcaggagggcggcaacatccgc
gtgacgcacgacctcacgcaggaggagatcgcccagctcgtcggcgcctcccgcgagacg
gtgaacaaggcgctggccgagttcgcgcaccgcggctggctgcggctcgagggcaagagc
gtcatcatctcggacaccgagcgcctggcccgccgcgcccgctga
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