Dietzia cinnamea: VYL96_04090
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Entry
VYL96_04090 CDS
T10417
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
dcd Dietzia cinnamea
Pathway
dcd00910
Nitrogen metabolism
dcd01100
Metabolic pathways
dcd01120
Microbial metabolism in diverse environments
dcd01310
Nitrogen cycle
Module
dcd_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
VYL96_04090 (nirB)
Enzymes [BR:
dcd01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
VYL96_04090 (nirB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
NIR_SIR_ferr
Fer2_BFD
Pyr_redox
Rubredoxin_C
Motif
Other DBs
NCBI-ProteinID:
WVF64258
LinkDB
All DBs
Position
complement(901014..903545)
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AA seq
843 aa
AA seq
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MTEHIVVVGHGMVSHRFVSTLGSRYADADVAVTVIGEEPDPAYDRVGLSAYVGAWERDAL
HLDDARHSADPRVTVRSGRLVTAIDTAARRVELDSGEHVDYDTLVLATGSRAFVPPVPGH
DLPGCHVYRTLDDLDAIRAAAERAGAGAHGVVIGGGLLGIEAANALSLLGLVPHVVERND
RLMPVQVDGRGGALLCDLIRDRGIDVHLSVTDTAIEESAAAGLRVALSSDDGETDVVDAA
LVVFSVGVRPRDELARAAGIAVAERGGVLTDRACRTSDPHVYAIGECAAIEGTCYGLVGP
GYTSAEVAAGQITGDAGTEFTGADLATKLKLMGVDVASFGDAHGRTPDCLEVVVDDPVAR
TYSKLVLSDDALTLLGGVFVGDAGPYQLLKPLLGRTLPSSNPLSLITPGAAADSGVGVDS
LPDDAQICSCNAVTKGDLREAICGGACDVPALKACTRAGTSCGSCLPLMRQVLEAEGVEQ
STALCEHFDQSRSELFEIVTVTGIRTFSGLIGRFGRGIGCDICKPTVASILASTSSDHVL
DGEQAALQDTNDHFLANIQKNGTYSVVPRMPGGEVTAEQLIVIGEIARDHDLYVKVTGGQ
RIDLFGARVEELPAIWRRLVDAGMESGHAYGKSLRTVKSCVGTSWCRYGQQDSVAMAVLL
ETRYRGLRAPHKIKMAVSGCARECAEARGKDVGVIATENGWNLYVGGNGGATPRHAQLLA
GDLTDDQLIRYIDRTVMFYVRTAERLQRMAPWLEALEGGLDHLREVVCDDSLGLAAELEE
RMEAHVAGYVDEWAAVLDDPDKLARFVSFVNAPEAPDPTVQFEQRDGRKVPVLLGSPAMP
VRS
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcacatcgtcgtcgtcgggcacgggatggtctcccaccgcttcgtctccacc
ctcggctcgcggtacgccgacgccgacgtggccgtcacggtgatcggcgaggaacccgat
cccgcctacgaccgcgtcggactgtccgcctacgtcggcgcgtgggagcgcgacgccctg
cacctcgacgacgcgcggcactccgccgacccccgcgtcaccgtgcggtccggccggctc
gtcaccgcgatcgacaccgccgcccggcgcgtggagctcgactccggcgagcacgtcgac
tacgacaccctggtcctggcgaccggctcgcgcgcgttcgtcccgcccgtccccggccac
gacctgcccggctgccacgtctaccgcacgctcgacgacctcgacgcgatccgcgcggcc
gccgagcgggccggggcgggcgcgcacggcgtggtgatcggcggcgggctgctgggcatc
gaggccgccaacgcgctgagcctgctcggcctggtcccgcacgtcgtggagcgcaacgac
cggctcatgcccgtccaggtcgacggccgcggcggcgccctgctgtgcgacctcatccgc
gaccgcggcatcgacgtgcacctcagcgtgaccgacacggccatcgaggagagcgccgcc
gccgggctccgcgtcgccctgtcctccgacgacggcgagacggatgtcgtcgacgcggcc
ctcgtcgtgttctccgtcggagtccggccccgtgacgagctcgcccgcgccgccgggatc
gccgtggcggagcggggcggcgtgctgaccgaccgggcctgccgcacctcggacccgcac
gtctacgcgatcggcgagtgcgcggccatcgagggcacctgctacggcctggtcgggccc
ggatacacctccgccgaggtcgcggccgggcagatcaccggcgacgccggcaccgagttc
accggggccgacctcgccaccaagctcaagctcatgggggtcgacgtggccagcttcggc
gacgcccacgggcgtacgcccgactgcctcgaggtggtggtggatgacccggtcgcccgc
acctacagcaaactcgtcctcagcgacgacgccctgaccctgctcggcggcgtgttcgtc
ggcgacgcgggcccctaccaactgctcaagccgctgctgggccgcaccttgccgtcgtcc
aatcccctgtccctcatcaccccgggcgcggcggccgactccggcgtcggcgtggactca
cttcccgacgacgcgcagatctgctcgtgcaacgccgtcaccaagggcgacctgcgcgag
gccatctgcggcggcgcgtgcgacgtgcccgccctcaaggcgtgcacccgggccggcacc
tcgtgcggctcgtgccttccgctcatgcgtcaggtcctcgaggccgagggcgtcgagcag
tccaccgcgctgtgcgaacacttcgaccagtcccgctcagaactgttcgagatcgtcacc
gtcaccggcatccgcacgttctccggcctgatcgggcgcttcgggcgcgggatcggctgt
gacatctgcaagccgacggtcgcgtcgatcctcgcctcgaccagctcggaccatgtcctc
gacggcgagcaggcggcgctgcaggacaccaacgaccacttcctggccaacatccagaag
aacggcacctactcggtggtaccgcggatgcccggcggcgaggtgacggccgagcagctc
atcgtgatcggcgagatcgcccgcgaccacgacctgtacgtcaaggtcaccggcggccag
cgcatcgacctgttcggcgcgcgcgtcgaggagctccccgccatctggcggcggctggtg
gacgcgggcatggagtccggccacgcgtacggcaagtcgctgcgcacggtcaagagctgc
gtgggcacctcctggtgccggtacggacagcaggactcggtcgcgatggcggtgctgctg
gagacccgctaccgcgggctgcgggcgccgcacaagatcaagatggccgtgtccgggtgt
gcgcgcgagtgcgcggaggcccggggcaaggacgtcggcgtgatcgccaccgagaacggc
tggaacctctacgtgggcggcaacggcggcgcgaccccgcggcacgcccagctgctggcc
ggcgacctcaccgacgaccagctcatccgctacatcgaccgcacggtgatgttctacgtc
cgcaccgccgagcggttgcagcgcatggcgccgtggctcgaggcgctcgagggcgggctc
gaccacctgcgggaggtcgtgtgcgacgactcgctcggcctggccgccgagctcgaggaa
cgcatggaggcgcacgtcgccggctacgtggacgagtgggcggccgtgctcgacgatccc
gacaagctcgcccggttcgtctcgttcgtcaacgcccccgaggcgccggaccccaccgtg
cagttcgagcagcgcgacggccgcaaggtgccggtgctgctcggctcccccgccatgccc
gtccgcagctga
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