Dietzia cinnamea: VYL96_06155
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Entry
VYL96_06155 CDS
T10417
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dcd Dietzia cinnamea
Pathway
dcd03030
DNA replication
dcd03430
Mismatch repair
dcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VYL96_06155
03430 Mismatch repair
VYL96_06155
03440 Homologous recombination
VYL96_06155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcd03032
]
VYL96_06155
03400 DNA repair and recombination proteins [BR:
dcd03400
]
VYL96_06155
Enzymes [BR:
dcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VYL96_06155
DNA replication proteins [BR:
dcd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VYL96_06155
DNA repair and recombination proteins [BR:
dcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VYL96_06155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WVF64634
LinkDB
All DBs
Position
complement(1347053..1348666)
Genome browser
AA seq
537 aa
AA seq
DB search
MPPSTSPAPVGVQAAFDELEPLLSEVTFVVVDLETTGTRPGGDEITEIGAVRVRGGEVQA
ELSTFVSIDGVLPGHISRLTGIAPEDLVGAPSLGEVMATFLEFSRGAVLVAHNARFDLGF
LRAAAAATGHRWPDPPSVCTLALARRVLHPGETRGHRLGVLAAHLGATVEPNHRALQDAR
ATVDVLHALISRVGDCGVSTLSELLAYDGRLAPEIRRRATLTESLTDGPGVYVFRDEAGG
PLYVGSSGSVRRRARSYYSGGDTRGRMRTMVGLAASVDSVPCAHLLEAWTVEEQLIDSLQ
PPFNRRSRSPRRGWWLSPPTGRASRPTIVRVPEDPTAIGPFRRAEDARTAWEDLLEAFGG
RPAPESWAALADGRDSAPLHALVEQIDRLAAGGAFERGARLRDRTAALIRVLARRQELVA
TAALAEIVLVQPAPRRAWAVAVVRHGRLAGSGTVPPGAAPMPVIDGLRAAAATVQPAPGP
FAGATRAQIQNVHRWIDSTQTRIVSVDGCWTLPVQGAHTLTDWADRAEHAAADHRHA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgtccacctcaccggcacccgtcggcgtgcaggccgcgttcgacgagctcgag
ccgctgctgtccgaggtgaccttcgtcgtcgtcgacctcgagaccaccggcaccaggccg
ggcggcgacgagatcaccgagatcggcgccgtccgggtcaggggaggcgaggtgcaggcg
gagctgtcgaccttcgtctcgatcgacggtgtcctaccggggcacatcagcaggctgacg
ggaatagcaccggaggatctcgtcggggcgccgtccctcggcgaggtgatggcgacgttc
ctcgagttctcgcgcggggcggtcctggtggcacacaacgcccggttcgacctcggcttc
ctccgcgccgccgcggcagcgacgggccaccggtggccggatcccccgtccgtgtgcacc
ctcgcgctcgcccggcgggtgctgcacccgggcgagacgcgtggccaccggctcggggtc
ctggccgcacacctgggcgccacggtcgagcccaatcaccgcgccctgcaggacgcgcgt
gccaccgtggacgtactgcacgccctcatctcgcgggtcggtgactgcggggtgtccacc
ctttcggagctgctggcgtacgacggccgcctggctcccgagatccgacgtcgcgcgacc
ctcaccgagtcgctcaccgacggtcccggggtctacgtcttccgcgacgaggccggcggg
ccgctgtacgtcggttcgtccggttcggtgcgtcgtcgcgcgcgttcctattactccggc
ggggacacccgaggacggatgcgcaccatggtcggcctggccgcatcggtggactcagtg
ccgtgcgcccacctcctcgaggcgtggaccgtcgaggaacaactcatcgactcactgcag
ccaccgttcaacagacggtcccgcagcccccggcgaggctggtggctctcccctcccacc
ggccgcgccagccgcccgacgatcgtccgggtcccggaggatcccactgcgatcggaccc
ttccgccgcgccgaggacgcgcgcaccgcctgggaggacctcctcgaggctttcggcggt
cggcccgcgcccgagagctgggcggcgctcgccgacgggcgtgattcggccccgctgcat
gcgctcgtggagcagatcgaccgactggccgcaggcggggccttcgaacgcggggcgaga
ctgcgcgacaggaccgccgccctcatccgggtactcgcccgccggcaggagctggtcgcc
accgccgcgctcgcagagatcgtgctcgtccaaccggcgccccgccgggcctgggcggtg
gcggtcgtccgccacggccggctcgccggatccggcacggttccacccggagccgcgccc
atgccggtcatcgacggactacgggccgccgcggccaccgtgcagcccgcacccgggccg
ttcgccggggcgacccgggcccagattcagaacgtccaccgatggatcgactccacgcag
acccgcatcgtctcggtcgacggctgctggacgctccccgtccagggtgcgcacaccctg
acggactgggctgaccgggccgaacacgcggccgccgatcaccgccacgcctga
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