Dietzia cinnamea: VYL96_07430
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Entry
VYL96_07430 CDS
T10417
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
dcd Dietzia cinnamea
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VYL96_07430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcd03021
]
VYL96_07430
Transcription machinery [BR:
dcd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VYL96_07430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WVF64858
LinkDB
All DBs
Position
complement(1626674..1628092)
Genome browser
AA seq
472 aa
AA seq
DB search
MSADQAASIPDSHRVTGCEGAFVAATKTTNSDSAASGDPSATEVTGEAPAKKTAARKAPA
KKTAAKKTAAKKTAAKKKAAKKTASPAGADVVEDDQLEDAGDSIEVEPDTSELEDVEVDV
ESVEDEQADEETKAEPSAKDKASGDFVWDEDESEALRQARKDAELTASADSVRAYLKQIG
KVALLNAEEEVELAKRIEAGLYATWYMAQVIERGEKLTTAQRRDFKWIERDGVRAKNHLL
EANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAIT
RAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQY
AREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLRSVLDTLSEREAGVVR
LRFGLTDGLPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaccaggcggcatcgatccccgattcccatcgagtaaccggttgtgaaggg
gcgtttgtggcagccacgaagaccaccaattcggattccgcggcgagcggcgatccgtcg
gccaccgaggtcactggcgaggcccccgccaagaagaccgccgcgcgcaaggcgcccgcg
aagaagacggcggccaagaagaccgccgccaagaagaccgcggccaagaagaaggccgcc
aagaagaccgcctcccccgcgggcgccgacgtggtcgaggacgaccagttggaggacgcc
ggggattctatcgaggtcgagcccgacacgtccgagctcgaagacgtcgaggtggatgtc
gagagcgtcgaagacgagcaggccgacgaggagaccaaggcggagcccagcgccaaggac
aaggcgtcgggcgacttcgtctgggacgaggacgagtccgaggccctccgccaggcccgc
aaggacgccgagctcaccgcctccgccgactccgtccgcgcctatctcaagcagatcggc
aaggtcgccctcctcaacgccgaggaggaggtcgagctcgccaagcgcatcgaggccggc
ctatacgccacctggtacatggcacaggtcatcgagcgcggcgagaagctcaccaccgcg
cagcgccgcgacttcaagtggatcgagcgggacggtgtgcgcgccaagaaccacctcctc
gaggccaacctccgcctcgtcgtgtcgctggccaagcgctacaccggccgcggcatggcg
ttcttggacctcatccaggagggcaacctcggcctcatccgcgccgtcgagaagttcgac
tacaccaagggctacaagttctccacgtacgccacgtggtggatccgtcaggccatcacc
cgcgcgatggccgaccaggcccgcaccatccgcatcccggtgcacatggtcgaggtcatc
aacaagctcggccgcatccagcgcgagctgctccaggacctgggccgcgagcccaccccg
gaggagctggccaaggagatggacatcaccccggagaaggtgctggagatccagcagtac
gcccgggagcccatctcgctggaccagaccatcggcgacgagggcgactcgcagctcggc
gacttcatcgaagactccgaggccgtggtggccgtggacgccgtgagcttcaccctgctg
caggaccagctccgctccgtgctcgacacgctctccgagcgtgaggccggcgtcgtccgg
ttgcgcttcggcctcaccgacggtctgccgcgcacgctcgacgagatcggccaggtctac
ggggtcacccgtgagcgcatccgtcagatcgagtccaagaccatgtccaagctgcggcac
ccgtcgcgctcgcaggtcctgcgggactacctggactga
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