Dietzia cinnamea: VYL96_07785
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Entry
VYL96_07785 CDS
T10417
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
dcd Dietzia cinnamea
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
dcd03051
]
VYL96_07785 (pafA)
Enzymes [BR:
dcd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
VYL96_07785 (pafA)
Proteasome [BR:
dcd03051
]
Prokaryotic proteasome
Bacterial regulatory particles
VYL96_07785 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
DUF7742
Motif
Other DBs
NCBI-ProteinID:
WVF64925
LinkDB
All DBs
Position
complement(1697848..1699254)
Genome browser
AA seq
468 aa
AA seq
DB search
MIRRIVGIETEFGITSVSGEGARGLGADEIARYLFRPVVERWRSSNVFLDNGARLYLDVG
SHPEYATAECDGLRQIVAHDRAGERIVDDLALAAEQSLADEGIDARVYLFKNNTDSVGNS
YGCHENYLLDRSTQVRGIANTLLPFLVSRQLICGAGKILTGTPAGVGLGESSEPVYCFSQ
RAEHMWDGVSSATTRSRPLINTRDEPHADSTRFRRMHVIVGDSNMIETSTLLKVASTRLV
LEMIEAGVELRPMAVAHPVRAIREISRDLTGARPVALTDGTTMSALEIQREFLGAVRRYL
DAGGWERDDRPDVEHCVALWERILDAVESGDHDSIAADVDWAAKLRLIRQVQARTGADLD
HPRLAQIDLTYHDIRPGRGLHSVLERRGMVSRVVDDAAVARARAVAPETTRAALRGRFIT
AAREAGRDFTVDWVHLKVSDGTMPTVALTDPFAEVDPRVDDLIAALGR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtcgcatcgtcgggatcgagaccgagttcgggatcaccagcgtcagcggtgaa
ggcgctcgtgggctcggcgccgacgagatcgcccgctacctgttccgccccgtcgtggag
cgctggcgcagctccaacgtcttcctcgacaacggcgcacgcctctacctcgacgtgggc
tcccaccccgagtacgcgaccgccgaatgcgacgggctgcgacagatcgtcgcccacgac
agggcgggggagcggatcgtcgacgacctcgccctggccgccgaacagtccctcgcggac
gagggcatcgacgcccgcgtctacctgttcaagaacaacaccgactccgtgggcaactcc
tacggatgccacgagaactacctgctcgaccgcagcacccaggtgcggggcatcgccaac
accctgctgccgttcctcgtcagccggcagctcatctgcggcgccggcaagatcctgacc
ggcactcccgccggcgtgggcctgggggagagctccgagccggtgtactgcttctcccag
cgcgccgaacacatgtgggacggcgtgtcctcggcgaccacccgctcgcgcccgctcatc
aacacccgcgacgagccgcacgccgactcgacgcggttccggcgcatgcacgtgatcgtc
ggcgactccaacatgatcgagacctcgacactgctcaaggtcgccagcacccggctcgtg
ctggagatgatcgaggccggcgtcgagctgcggccgatggccgtcgcgcaccccgtgcgc
gcgatccgcgagatcagccgcgacctcaccggcgcccgccccgtcgccctcaccgacggc
accaccatgtccgcgctcgagatccagcgcgagttcctcggcgcggtccggcgctacctc
gacgccggcggctgggagcgcgacgaccgccccgacgtcgaacactgcgtggccctgtgg
gagcgcatcctcgacgccgtggagtccggggaccacgactcgatcgccgccgacgtcgac
tgggccgccaagctgcgtctcatccggcaggtgcaggccaggacgggtgccgatctcgac
cacccgcgcctcgcgcagatcgatctcacctaccacgacatccggcccggacgggggctg
cactccgtgctcgaacgccgggggatggtctcgcgcgtcgtcgacgacgccgcggtcgcg
cgcgcccgcgccgtcgcccccgagaccacccgcgccgcgctgcgcggccggttcatcacc
gccgcacgggaggccggacgcgacttcaccgtggactgggtgcacctcaaggtatccgac
ggcaccatgcccaccgtcgcgctgaccgacccgttcgccgaggtcgacccgcgtgtcgac
gatctcatcgccgcgctcggacgatag
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