Dietzia cinnamea: VYL96_08245
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Entry
VYL96_08245 CDS
T10417
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dcd Dietzia cinnamea
Pathway
dcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VYL96_08245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcd03400
]
VYL96_08245
Enzymes [BR:
dcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VYL96_08245
DNA repair and recombination proteins [BR:
dcd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VYL96_08245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
Motif
Other DBs
NCBI-ProteinID:
WVF65009
LinkDB
All DBs
Position
complement(1796760..1798805)
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AA seq
681 aa
AA seq
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MTTTRPATRVAAAERPVARVLPLLGVPHLDREFDYRVPESMSAEARPGVRVRVRFAGRLV
DGFLVERAAHTDHQGELAWLERVVSPEPVLTPALLRLVDLVARRWVGTRSDVLRLAIPPR
HAAAEKSVPEPGAPEGVSIGPVELPAGWEDHPMVARFLEAVTGGVPARGVWTVPPGRDWA
RSLAALADSVRRRGLQVLLIVPDQRDVDRLAGACREVVGGGAAGRDLVADLSAGVGPSAR
YRRWLRAVRGHARIVVGTRSSVFAPLPEPGLIVLHDDGDDSFVEPRAPYPHTRDVAAQRS
ALEGTPLLLTSVDRTPEVAEYVRTGWAHEIRPRAGLVRELAPRVVAVTDADPLQARDVAG
GRTRLPAVALTMARESIDVDAPVLVQVPRKGYIPTLLCGSCRTPARCRRCNGPLRAGRMD
EVYGPVELACGWCGAPEPGFRCVACGSRALRAGVVGAGRTAEELGRMFPGVRIRTSGGGE
ILDSVPASPAIIVSTPGAEPVADGGYGAALLLDSWALLGRPDLRAVQNALRLWIGAAGLV
RPADEGGRVFLSADSGSAVAQALVRWDPQGWAERELADRAEVGFPPAVHMMAVDGPAAAL
AEFLEDFRFADSVEVLGPVDLPPGEELPGHDEVEDPERVLLRVPPAMLNDVAAELRALIV
RRAGRRSTHPLRVRLDPVNIG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacaacgcgcccggcgacccgggtcgcggcggccgagcgccccgtggcccgggtt
ctgccgttgctcggggtaccccacctcgaccgcgagttcgactaccgggtgcccgagtcg
atgtcggccgaggctcgccccggcgtacgcgtgcgggtgcgtttcgccggccgacttgtc
gacggtttcctcgtcgaacgcgcggcccacaccgaccaccagggcgagctcgcctggctc
gaacgcgtggtctccccggaacccgtcctcaccccggcgctgttgcgcctggtggacctc
gtcgcgcgccggtgggtgggcacgcggtccgacgtgctccgactggccatcccgccccgg
cacgcggcggcggagaagtccgtgcccgagcccggcgcgcccgagggggtgtcgatcggc
ccggtcgaactaccggcgggctgggaggaccacccgatggtcgccaggttcctcgaggcg
gtcaccggcggtgtgccggcccggggggtgtggacggtgccgcccggccgggactgggcg
cggtcgttggccgcactcgccgactccgtccgacgacggggtctgcaggtgctgctcatc
gtcccggaccaacgtgacgtcgaccgcctcgccggggcgtgccgcgaggtggtcgggggc
ggagcggccggccgggacctcgtcgccgacctgtccgcgggagtgggcccctccgccagg
taccgacgctggctgcgcgcggtccgcgggcatgcacggatcgtcgtgggcacacgcagc
tccgtcttcgccccgctccccgaaccgggcctcatcgtgctgcacgacgacggtgacgac
tccttcgtcgaaccccgcgctccgtatccgcacacgcgtgatgtcgccgcccagcgttcc
gcgctggagggcaccccgctcctgctgacgtcggtggaccggacgccggaagtcgcggag
tacgtgaggaccggctgggcacacgagatccggccccgcgccggcctggtccgcgagctg
gccccgcgcgtggtggccgtgacggacgccgacccgctccaggcacgcgacgtcgcgggc
ggccgcacgcgcctgccggccgtcgcgttgacgatggcccgcgagtcgatcgacgtcgac
gcgccggtcctggtccaggttccccggaaggggtacatccccactctgctgtgcggttcc
tgccggacgcccgcccggtgtcgtcgctgcaacggccccctgcgcgccggccgcatggac
gaggtctacgggccggtcgagctggcgtgcgggtggtgcggggcgcccgagccggggttc
cggtgcgtggcctgcggatcgcgtgcgttgcgcgccggggtcgtgggcgcggggcgcacc
gccgaggagttgggccggatgttccccggggtgcggatccgcacgagcgggggaggggag
atcctcgactccgtgcccgcgagtcccgcgatcatcgtgtccacccccggcgcggagccc
gtcgccgacggcggttacggcgccgcgctgctgttggactcgtgggcgctgctcggccgg
cccgacctgagggctgtgcagaacgcgctccggctgtggatcggcgccgccgggctcgtc
cgcccggccgacgagggtggcagggtgttcctgtcggcggactccgggtccgcggtcgcc
caggcgttggtccggtgggacccacagggctgggcggagcgcgagctcgccgaccgcgcc
gaggtcgggttccccccggcggtccacatgatggcggtcgacggccccgcggcggcgctg
gcggagttcctcgaggacttccggttcgccgacagcgtcgaggtgctcggcccggtggac
ctcccccctggcgaggagctgcccggccatgacgaggtggaggatcccgagcgggtcctc
ctgcgggtccccccggcgatgctgaacgacgtcgccgcggagctgcgcgccctcatcgtc
cggcgggcgggcagacgatccacccatccgctgcgcgtccgcctggatcccgtgaacatc
ggatga
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