Dietzia cinnamea: VYL96_09140
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Entry
VYL96_09140 CDS
T10417
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
dcd Dietzia cinnamea
Pathway
dcd00470
D-Amino acid metabolism
dcd00550
Peptidoglycan biosynthesis
dcd01100
Metabolic pathways
dcd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VYL96_09140
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VYL96_09140
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VYL96_09140
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dcd01011
]
VYL96_09140
Enzymes [BR:
dcd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
VYL96_09140
Peptidoglycan biosynthesis and degradation proteins [BR:
dcd01011
]
Precursor biosynthesis
Amino acid ligase
VYL96_09140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
WVF62103
LinkDB
All DBs
Position
complement(1981943..1983049)
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AA seq
368 aa
AA seq
DB search
MNRITVAVLYGGRSSEHSVSCVSAGAVMGHLDRSRYEVIPVGITEAGAWTLGSDDTADLR
IADRIMPVVDAGRPRVALGLSTDDRGVLRFADGDRAGQEIARVDVVFPVMHGTHAEDGTI
QGLLELSGIPYVGPGVFASAAGMDKEFTKVVLGAAGLPIGRQVVLRPGTATLSPADRDRL
GLPLFVKPARGGSSIGITKVSRAADLDAAIAEARRFDEKVIVEAAIVGREIECGVLEYPD
GRVEASLPAELHIPGEPTGVEGETEGDAFYDFDTKYLDDVTTFDLPADLPAEQTEQLRTL
AVEAFHALDARGLSRVDFFVTAEGPVINEVNTMPGFTPISMYPQMWAATGVDYESLLDTL
IRTAITRG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgcatcaccgtcgcagtcctctacggtggccgcagctccgagcactccgtgagt
tgcgtgtccgccggtgccgtcatgggtcacctcgaccgctcccgctacgaggtgatcccc
gtcggcatcaccgaagccggggcgtggaccctcggctccgacgacacggcggacctgcgc
atcgccgaccggatcatgcccgtggtcgacgccggccgtccgcgggtggccctcggactg
tccaccgacgaccgcggcgtgctgcggttcgccgacggcgaccgggccgggcaggagatc
gcccgggtggacgtggtcttcccggtcatgcacggcacgcacgccgaggacgggaccatc
caggggctgctggagctgtccggcatcccgtacgtcgggccgggtgtgttcgccagcgcc
gcggggatggacaaggagttcaccaaggtcgtgctgggcgcggccgggctcccgatcggc
cgtcaggtcgtcctgcggcccggcaccgcgacgctctcgcccgccgaccgcgaccgtctg
gggctgccgctcttcgtcaagccggcccgcggcggttcgtccatcggcatcaccaaggtc
tctcgggcggccgacctcgacgccgcgatcgccgaggcccgccgcttcgacgagaaggtg
atcgtcgaggctgcgatcgtcggccgcgagatcgagtgcggcgtgttggagtacccggac
ggccgggtcgaggcgagcctgccggccgagctgcacatccccggcgaaccgaccggggtg
gagggcgagacggagggcgacgccttctacgacttcgacaccaagtacctcgacgacgtg
acgaccttcgatctgcccgccgacctcccggcggagcagaccgagcagctacggaccctg
gcggtcgaggcgttccacgccctcgacgcccgcggcctcagccgcgtggacttcttcgtc
accgccgaggggccggtgatcaacgaggtcaacacgatgccgggattcaccccgatctcg
atgtacccgcagatgtgggcggcgaccggggtcgactacgagagcctgctcgacaccctg
atccgcaccgcgatcacccgcggctga
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