Dietzia cinnamea: VYL96_10655
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Entry
VYL96_10655 CDS
T10417
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dcd Dietzia cinnamea
Pathway
dcd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VYL96_10655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcd02000
]
VYL96_10655
Transporters [BR:
dcd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VYL96_10655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WVF62375
LinkDB
All DBs
Position
complement(2322875..2324479)
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AA seq
534 aa
AA seq
DB search
MRRIPTAAAALAITALALSACGSSEADPAAAADRDTLTMPADDARCTENKAGGTITMGTY
VMLPSFSPGQGQVGVRGGAESAAVYDRLVRWDARTETFEPKLAESLESSEDHTVWTLTLR
EGVTFSNGDPLTAQDVAFTMGLHKDPATRSTAMTDVQQIERTRVVDPLTVEFTLAEPWST
FPVLLAGSAGEVIPEKAYTEAGPEKWAREPVGAGAFTLASYTPNQEIVLEPNPDYYGGPV
CLTLRFIQIPGSQSTLEAFQNDEVEVAFLRGSKFADMAREADAQGYEEITSAGRLIYMNN
GAAGYDGILTDQRARRAVTHAIDRELLLGRLGDDPAQATSALLADSSRFFDGQEGPALDV
ERATELVTELKQETGWDGSLTLLVSDVPENREAGIVIKAMLDAVGFDVTVEVAPASAASA
RQFTGDYEMAIGGLATSDADPASTLASSLMPGGALNVSGVDDPAFADAISTLKAAPDVDS
QKKAYTDLQEVHNEVAPYAVLGNGVELVTIDESVRGISPTTSSTMLFDGAFIEE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcattcccaccgccgccgctgccctggcgatcaccgccctcgccctgtccgcg
tgcggttcgagcgaggccgatcccgctgcggcggccgatcgggacacgctgacgatgccc
gccgacgacgcccggtgcaccgagaacaaggccggcggcaccatcacgatgggcacctac
gtcatgctgccgtcgttctcgcccggccagggacaggtgggcgtgcggggtggcgcggag
tcggcggccgtctacgaccggctcgtgcgctgggacgcccggaccgagacgttcgagcca
aagctcgccgagtcgctcgagagctccgaggatcacacggtgtggacgttgacgctgcga
gagggcgtgacgttctccaacggcgacccgctcaccgcgcaggacgtggccttcaccatg
ggcctgcacaaggacccggcgacgcgctcgacggcgatgaccgacgtccagcagatcgag
cggacgcgggtcgtcgatccgttgaccgtcgagttcacgctcgccgagccgtggtccacg
ttcccggtgctgctcgccgggtcggcgggcgaggtgatccccgagaaggcctacaccgag
gcgggtccggagaagtgggcccgcgagccggtgggcgccggggcgttcacgctcgccagc
tacacgcccaatcaggagatagtgctggagccgaatcccgactactacggcggcccggtg
tgcctcacgctgaggttcatccagatccccggctcgcagtccacgctcgaggcgttccag
aacgacgaggtggaggtcgcgttcctgcgcgggtccaagttcgcggacatggcccgcgag
gccgacgcgcagggctacgaggagatcaccagcgcgggccggttgatctacatgaacaac
ggggcagcggggtacgacgggatcctcaccgatcagcgcgcacgccgggccgtgacgcat
gcgatcgacagggagctgctgctcggccggctgggcgacgatccggcccaggccacgtcc
gcgctactggccgactcgtcccgcttcttcgacgggcaggaggggcccgcgctggatgtc
gagcgtgcgaccgagctggtcaccgagctcaagcaggagaccggctgggacggctcgctc
acgctgctcgtgtccgacgtgccggagaaccgcgaggcggggatcgtcatcaaggcgatg
ctcgacgccgtcggcttcgacgtgacggtcgaggtagcaccggcctcggcggcgagcgcg
cgtcagttcacgggcgactacgagatggccatcggcggcttggccacctccgacgccgac
ccggcctccacgctggcgagttcgctcatgccgggcggcgctctcaacgtgtcgggcgtg
gacgatcccgcgttcgcggacgccatctccacgctcaaggccgccccggacgtcgactcg
cagaagaaggcctacaccgacctgcaggaggtccacaacgaggtggcgccctacgcggtc
ctcggcaacggcgtcgagctggtgacgatcgacgagtcggtcaggggcatcagcccgacc
acctcctcgacaatgctcttcgacggcgcgttcatcgaggaatag
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