Dietzia cinnamea: VYL96_12430
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Entry
VYL96_12430 CDS
T10417
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dcd Dietzia cinnamea
Pathway
dcd00521
Streptomycin biosynthesis
dcd00523
Polyketide sugar unit biosynthesis
dcd00525
Acarbose and validamycin biosynthesis
dcd00541
Biosynthesis of various nucleotide sugars
dcd01100
Metabolic pathways
dcd01110
Biosynthesis of secondary metabolites
dcd01250
Biosynthesis of nucleotide sugars
Module
dcd_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VYL96_12430 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VYL96_12430 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
VYL96_12430 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VYL96_12430 (rfbB)
00525 Acarbose and validamycin biosynthesis
VYL96_12430 (rfbB)
Enzymes [BR:
dcd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
VYL96_12430 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
adh_short
KR
ProQ
Motif
Other DBs
NCBI-ProteinID:
WVF62710
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Position
complement(2686309..2687337)
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AA seq
342 aa
AA seq
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MRLVVTGGAGFIGANFVRSVVREYPQAHVTVLDSMTYAANRANLDGLPADRVRLVEADCA
DAAITDRLVSELTGPRDAVVHFAAESHNDNSLATPWPFVHSNIVGTYTILEACRRHDVRL
HHVSTDEVYGDLELDDPATFTPATAYNPSSPYSATKAGADMLVRAWVRSFGVRATISNCS
NNYGPYQHVEKFIPRQITNILDGRRPRLYGSGANVRDWIHVDDHNSAVLRILEAGEPGRT
YLIGADGERSNLEVMRMICELMGVSGTGGDPGFDHVTDRPGHDLRYAIDASATREELGWE
PQHTDFREGLRQTIEWYAAHRDWWEPVKERVEATYARTEKVL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgtcgtcaccgggggagccgggttcatcggcgccaacttcgtccgctccgtc
gtccgcgagtacccgcaggcccacgtcacggtgctcgactccatgacgtacgccgccaat
cgcgcgaacctggacgggctccccgccgaccgggtccggctggtggaggcggactgtgcg
gacgccgcgatcacggaccggttggtctccgagctgacggggccgcgcgacgcggtcgtg
cacttcgcggcggagagtcacaacgacaactcgctcgccacgccgtggccgttcgtgcac
tcgaacatcgtgggcacgtacacgatcctcgaggcctgccggcgccacgacgtgcgcctg
caccacgtctcgacggacgaggtctacggggacctggaactggacgacccggccacgttc
accccggccacggcgtacaacccgtcgagtccgtactcggcgaccaaggcgggcgcggac
atgctggtgcgcgcgtgggtccgcagcttcggggtgcgcgccacgatcagcaactgctcg
aacaactacgggccctaccagcacgtggagaagttcatcccgcggcagatcaccaacatc
ctcgacggtaggcggccccgcctctacggcagtggagccaacgtgcgggactggatccac
gtcgatgaccacaactccgcggtcctgcgcatcctcgaggcgggcgagccgggacggacg
tacctcatcggcgccgacggcgagcgctccaacctcgaggtcatgcggatgatctgcgag
ctcatgggcgtctcgggcaccggcggtgacccggggttcgaccacgtcaccgaccgcccg
ggccacgacctgcgctacgcgatcgacgcctccgccacccgggaggaactgggctgggag
ccgcagcacacggacttccgcgagggcctgcggcagaccatcgagtggtacgccgctcac
cgcgactggtgggagccggtcaaggagcgggtcgaagcgacgtacgcccgaacggagaag
gtcctgtga
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