Dietzia cinnamea: VYL96_12895
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Entry
VYL96_12895 CDS
T10417
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
dcd Dietzia cinnamea
Pathway
dcd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
VYL96_12895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcd03400
]
VYL96_12895
DNA repair and recombination proteins [BR:
dcd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
VYL96_12895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
YL1
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
WVF62797
LinkDB
All DBs
Position
complement(2768608..2769729)
Genome browser
AA seq
373 aa
AA seq
DB search
MRSIWKGEVSFGLVNVPVKVYAATEDHDLHARQVDKKDGVRIRYKKVRDDNGEEVEFSDI
AKAYESEEGEMVILTKEDLASLPVEQNHEIEVTEFVPADQVDPVAFDNAYFLEPASRSNR
AYVLMREALQQTDRLAICTFTLRNRTRLCALRVYKDVLMLQTLLWPDEIRPAILEGLDKE
AKVRPQEVKMAASLIETMAADFEPEKYEDDYQNQLKELIEAKAAGGEAFTVEEKDTSGDE
DGDDEVADLLAALRASVKDRGGKADDADDQDDDQDDDEDDDDEDSGSAKKTTSRKSGSSS
ARKAPAKKTAAKKAPAKKAAAKKSTAKKSTSSKSDSGSSGSGTAKKSTASKSTAKKAPAK
KSTARKAPAKKSA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccatctggaagggcgaggtctcgttcggtctggtcaacgtgccggtcaaggtg
tacgcggcgacggaggaccacgatctgcacgcgcggcaggtggacaagaaggacggcgtc
cgcatccgctacaagaaggtgcgggacgacaacggcgaggaggtcgagttctccgacatc
gccaaggcgtacgagtccgaagagggcgagatggtcatcctcaccaaggaggacctggcc
agcctgccggtggagcagaaccacgagatcgaggtgacggagttcgtcccggcggatcag
gtggatccggtggcgttcgacaacgcgtacttcctcgagccggcgtcgcgctccaaccgg
gcgtacgtgctcatgcgcgaggcgctgcagcagacggatcgcctcgccatctgcacgttc
acgctgcgcaatcgcactcgcctctgcgccctccgggtgtacaaggacgtgctcatgctg
cagacgctgttgtggccggacgagatccgcccggcgatccttgaggggctggacaaggag
gcgaaggtccggccgcaggaggtcaagatggcggcgtcgctcatcgagaccatggcggcg
gacttcgagccggagaagtacgaggacgactaccagaatcagctcaaggagttgatcgag
gccaaggcggccggcggtgaggcgttcacggtggaggagaaggacacctcgggcgacgag
gacggcgacgacgaggtggccgacctgctcgcggcgctgcgggcgagtgtgaaggaccgg
ggcggcaaggcggacgacgccgacgaccaggacgacgaccaggacgacgacgaggacgac
gacgacgaggactccggctccgccaagaagaccaccagcaggaagagcgggagtagctcg
gcaaggaaggccccggccaagaagactgcggcgaagaaggcgcccgccaagaaggccgcg
gcaaagaagtcgacggccaagaagtcgacgtcctccaagtcggactccggcagctccggc
tcgggcaccgccaagaagtcgacagcctccaagtccacggccaagaaggccccggcgaag
aagtcgacggcccgcaaggcaccggccaagaaatctgcctga
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