Dietzia cinnamea: VYL96_13220
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Entry
VYL96_13220 CDS
T10417
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
dcd Dietzia cinnamea
Pathway
dcd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dcd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VYL96_13220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcd02000
]
VYL96_13220
Transporters [BR:
dcd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VYL96_13220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BPD_transp_1
AAA_21
AAA_29
nSTAND1
AAA_16
AAA_22
AAA_25
SMC_N
OppC_N
AAA_23
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
WVF62851
LinkDB
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Position
2841613..2843265
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AA seq
550 aa
AA seq
DB search
MREAPPARRATPRRVAGAAMLAAIVVFALLWPVLAPDAMTTSDYLAADLPPSPAHPMGTD
ALGRDLSVLVARALQVSLAVAAGSAAMAGLLGVVVGTAAAAGGRRVDAALMRVTDAVAAV
PHLLATVVVVALFRGSLAAIVLALALTHWPGVARVVRAEAQKVMATGYVAASRAAGASPA
QVARWHVVPAVAGQAGLAVVLMVPHAVWHESTLSFLGIGLSPERASLGTLVAMSQSGLLV
GRWWPLAFPTAALIAVTVAVALLGPGRAGRGVGSAGGGRGGRVASVPAVGDDDDEARTTR
AALRVDGLTVRHGGSGADAGETAVDGVSLRVEPGRVVAIVGPSGAGKSSLLDACAGLVAP
GSVVAGRVEVGGRGMPGHVAQTAADAFTPTRHLRGQLEESIAVAAARGSATGTGSVPAGG
PTDVAALCRLVGVDPALADRYPHQLSGGQLRRMAIAVALGTWPSVLLADEPTAGLDPALA
LAVLRQLRRLADETGVAVLLATHDLVALEASGAADEVVSMQAGRLCPADPSQGNRAPADA
TAPAGELVTP
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaggccccgcccgcccgccgggcgacgccccgccgcgtcgcgggggcggcgatg
ctcgcggcgatcgtcgtgttcgcgctgctctggccggtgctcgcgcccgacgcgatgacc
acctccgactacctcgccgccgacctgccgccctcgcccgcgcacccgatggggaccgac
gccctcggccgcgacctgtccgtgctggtcgcgcgggcgctgcaggtgtcgctggcggtg
gccgccgggtccgcggcgatggcagggctgctcggggtggtcgtggggaccgccgccgcg
gcgggcgggcggcgcgtcgacgcggcgctgatgcgggtcaccgacgccgtcgccgccgtg
ccgcacctgctggcgacggtcgtggtggtggcgttgttccgcgggtcgctcgccgcgatc
gtgctcgccctcgcgctcacgcactggccgggcgtggcgcgcgtcgtgcgggccgaggcg
cagaaggtcatggccacggggtacgtggcggcctcgcgcgcggcgggcgcgtccccggcg
caggtcgcccggtggcacgtggtgccggcggtcgcgggtcaggcggggctcgccgtggtg
ctcatggtgccgcacgccgtgtggcacgagtcgaccctgtcgttcctggggatcggcctg
tcccccgagcgggcgagcctgggcacgctcgtcgcgatgtcgcagtccggcctgctggtg
ggccggtggtggccgctggcgttcccgaccgccgcgctcatcgccgtgaccgtggccgtg
gccctgctcggacccggcagggcggggcggggggtggggtcggccggcggtggtcgcggt
ggccgtgtggcgtcggttccggccgtcggtgacgacgacgacgaggcgcgcaccacccgg
gcggcgctgcgcgtggacggtctcacggtgaggcatgggggcagcggcgcggacgccggg
gagaccgcggtggacggggtgtccctgcgcgtcgagcccggtcgggtcgtggcgatcgtc
ggcccgtcgggcgccggcaagtcgagcctgctggacgcgtgcgccgggctcgtggcgccg
ggctcggtcgtggcggggcgggtcgaggtgggcgggcgcgggatgcccggccatgtcgcc
cagaccgccgctgatgcgttcaccccgacccggcacctccgtgggcaattggaggagtcg
atcgcggtcgcggcagcacgcggcagcgcgaccggcaccggcagcgttccggccggcggc
ccgaccgacgtggctgcgctgtgccgactggtgggcgtcgaccccgcgctcgccgaccgc
tacccgcaccagctctccggcggccagctgcggcggatggccattgccgtcgcgctgggc
acctggccgtcggtgctgctcgccgacgaacccaccgccggactcgaccccgctctcgca
ctcgccgtcctgaggcagctgcggcgcctggccgacgagaccggtgtcgcggtgctgctc
gcaacgcatgacctggtggcgctcgaagccagcggtgctgccgacgaggtcgtgtcgatg
caggcagggcgcctgtgccctgcggacccctcccagggcaaccgcgcccccgcggacgcc
accgcacccgccggggagctggtgacaccgtga
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