Denitrificimonas caeni: O6P33_00650
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Entry
O6P33_00650 CDS
T08709
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dce
Denitrificimonas caeni
Pathway
dce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O6P33_00650 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dce03021
]
O6P33_00650 (rpoA)
03400 DNA repair and recombination proteins [BR:
dce03400
]
O6P33_00650 (rpoA)
Enzymes [BR:
dce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O6P33_00650 (rpoA)
Transcription machinery [BR:
dce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O6P33_00650 (rpoA)
DNA repair and recombination proteins [BR:
dce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O6P33_00650 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Trm5_N
Motif
Other DBs
NCBI-ProteinID:
WBE25395
UniProt:
A0AAE9VNG3
LinkDB
All DBs
Position
complement(133279..134280)
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRQINVDMVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEVE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAVILHGRDEATLTLSKKGPGVVTAADIKLDHD
VEIVNGDHVIANLADKGALNMKLRIARGRGYESADSRFTDEDETRSIGRLQIDSLFSPVR
RVAYVVENARVEQRTNLDKLIIDLETNGTLDPEEAIRRSATILQHQLAAFVDLQSEVEQV
EEKPEDEIDPILLRPVDDLELTVRSANCLKAESIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacccctcgtcaaattaacgttgacatggtcagt
ccgacccgcgccaaaatcacgcttgagcctctcgagcgtggatttggacatactttgggc
aacgcgctacggcgtatattgttgtcttcaatgcctggctgtgctgtcgtcgaagttgaa
atcgacggcgtattgcacgagtacagtgctattgaaggggttcaagaagatgtcattgag
attcttcttaacctgaaaggccttgcagttattttgcacggtcgtgacgaagccacgtta
actctgagcaaaaaagggccgggcgtggtgactgctgccgatattaagctggatcatgat
gtggaaatcgtcaatggcgaccacgtgattgccaatctggctgacaagggcgcattgaat
atgaagctgcgtattgcacgtggccgtggctatgaatcagcggattctcgttttactgac
gaagatgaaactcgtagcattggtcgtttgcaaatcgattcattattcagccctgttcgt
cgtgttgcatacgtggtggaaaacgcccgtgttgagcagcgtactaacttggacaaactg
atcattgatcttgaaaccaatggcacccttgaccctgaagaagcgattcgtcgcagtgca
acaattctgcaacatcagttagcagcattcgttgatcttcagagtgaagtagagcaggtt
gaagagaagccggaagatgagattgatccaatcttgttgcgtccggttgatgatttagag
ttgactgtgcgttcggcaaactgcctcaaagcagaaagcatttactacattggtgatctg
attcagcgcaccgaagtagaattgttaaaaacaccgaacttgggtaaaaaatccctgact
gaaatcaaggatgttttagcctcgcgtggtctgtccctcggtatgcgccttgataactgg
ccgccggcaagtttgaagaaagacgataaggctacggcctga
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