Denitrificimonas caeni: O6P33_01525
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Entry
O6P33_01525 CDS
T08709
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dce
Denitrificimonas caeni
Pathway
dce03420
Nucleotide excision repair
dce03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O6P33_01525 (uvrD)
03430 Mismatch repair
O6P33_01525 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dce03400
]
O6P33_01525 (uvrD)
Enzymes [BR:
dce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O6P33_01525 (uvrD)
DNA repair and recombination proteins [BR:
dce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O6P33_01525 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
O6P33_01525 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
DUF2173
Motif
Other DBs
NCBI-ProteinID:
WBE25552
UniProt:
A0AAE9VPI3
LinkDB
All DBs
Position
308658..310871
Genome browser
AA seq
737 aa
AA seq
DB search
MHDDISHLLNALNEAQREAVAAPIGQQRVLAGAGSGKTRVLVHRIAWLIQVEGASPHSIL
SVTFTNKAAAEMRLRIEELLGMNPAGMWVGTFHGLAHRLLRAHWQEAGLAEGFSILDGDD
QQRLLKRVMRELNLDEKRWPVRQAQWFINGQKDEGLRPQHIQAGGDLFLATMLQIYTAYE
EACARAGAIDFAELLLRALDLWRDNPSLLQHYQQRFKHVLVDEFQDTNAVQYAWLRLLAQ
GGKSLMVVGDDDQSIYGWRGAKIENIQEFSNDFVNTQSIRLEQNYRSTATILKAANALID
NNQGRLGKELWTDGAEGEPIRLYSAYNEHDEARYIVECIEQALRKGELKRSDIAILYRSN
AQSRVLEEALLRAAVPYRIYGGQRFFERLEIKNALAYLRLLRSRHDDGAIERVINVPTRG
IGEKTIETVRHAAREHDLSLWAAMHLLIEQKTLTGRASNALKGFIELIEELAVRTQDCDL
HAMTQITIEQSGLLTYHQEEKGEKGQARVENLEELVSAARTFTKDGDLSATDGEIDDDLP
PLVAFLDHAVLEAGDTQADEFTEAVQLMTLHSAKGLEFPIVFIAGMEEGLFPHKMSLEEP
GRLEEERRLAYVGITRAMQQLYITCAETRRLYGTETYNKVSRFVREIPADLLQEVRMNNS
VSRPYQSSHQVQSSPMFSGAEVPETGFNLGQLVQHAVFGEGVILNFEGSGAQARVQVNFA
NEGIKWLMVAYAKLEPL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgatatctcacacttattaaacgccctcaacgaagcccagcgtgaagctgtg
gctgcgcccattggtcaacagcgggttttagccggcgctggttcaggcaaaacacgggtg
ttagtccaccgtattgcttggctgattcaagttgaaggggcttccccgcacagtatttta
tcggtgacttttaccaataaagccgctgccgaaatgcgcctgcgtattgaagagctgctg
ggcatgaacccagcgggcatgtgggtgggcactttccacggtttagcccaccgcttactg
cgtgctcactggcaagaagcaggtttagctgaaggttttagcattctcgatggcgatgac
caacagcgcttattaaagcgggtaatgcgcgaactcaatctagacgaaaaacgctggcca
gtgcgtcaagcgcagtggtttattaatggccaaaaagacgaaggcctgcgcccgcagcat
attcaagccggtggcgatttgtttttagccaccatgctgcaaatttatacggcctacgaa
gaagcctgcgctcgcgctggggccattgattttgctgagctattgctgcgtgccttggat
ctctggcgcgacaacccaagcttattgcagcattaccaacagcgctttaagcatgtgttg
gtagacgagtttcaagacactaacgccgtgcaatatgcttggttacgcctgctcgcccaa
ggcggcaaaagcctgatggtagtgggcgatgatgaccaatccatttatggctggcgcggc
gccaaaattgagaacatccaggagttctctaacgactttgttaacacgcaaagcattcgt
ttggagcaaaattaccgctccaccgccaccattcttaaagctgccaacgccttaatcgac
aataaccaaggccgcttaggtaaagaactgtggaccgacggcgcagaaggtgaaccaatc
cgcttgtatagcgcttataacgagcacgatgaagcccgttatatcgttgaatgtattgag
caagcgctgcgcaaaggcgagctcaagcgcagtgatattgccattttataccgctccaac
gcccagtctcgggtgctggaagaagccttattacgcgccgcagtaccgtaccggatttac
ggcgggcaacgcttctttgaacgcctcgaaattaaaaacgccctggcctatttgcgtttg
ctgcgcagccgccatgatgacggcgccattgagcgagtgattaatgtgcccacccgcggt
attggtgaaaaaaccattgaaactgtacgccatgcagcgcgggaacatgatctttccctg
tgggcagcgatgcacttgctgattgagcaaaaaaccttaaccggccgcgccagtaacgct
ctcaagggttttattgagctgattgaagagctggctgtgcgcacccaagattgtgatttg
catgccatgacgcaaattaccattgagcaatcgggcttgctcacctatcaccaagaagag
aaaggtgaaaaaggccaagcgcgagtggaaaacctcgaagagctggtcagtgccgcccgc
acctttaccaaagacggcgatctcagtgccacagacggcgagattgacgatgatttaccg
ccactggtggcgtttttagatcatgcggtactggaagcgggcgacacccaagccgatgag
tttactgaagccgtgcaactgatgaccttgcatagcgccaaaggcctggagtttcctatt
gtctttatcgccggtatggaagaaggcttatttcctcacaagatgagccttgaagagccg
ggccgcttagaagaagagcgccgtttagcctatgtgggcattactcgggccatgcagcag
ctgtatatcacttgtgctgaaacccgccgcctatatggcactgaaacctataacaaggtt
tcgcgttttgttcgcgagatccctgctgatttgctgcaggaagtgcggatgaacaacagt
gttagccgcccctaccaaagctcgcaccaagtgcaatcgagccctatgtttagtggtgcg
gaagttccagaaacaggctttaatttgggccaattggtgcagcacgcagtcttcggagag
ggcgtcattttaaactttgaaggctctggtgcccaagcgcgcgtgcaagtcaacttcgcc
aatgaggggatcaaatggctaatggtcgcttacgctaagcttgagccactatag
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