Denitrificimonas caeni: O6P33_01900
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Entry
O6P33_01900 CDS
T08709
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dce
Denitrificimonas caeni
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dce03032
]
O6P33_01900 (gyrB)
03400 DNA repair and recombination proteins [BR:
dce03400
]
O6P33_01900 (gyrB)
Enzymes [BR:
dce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
O6P33_01900 (gyrB)
DNA replication proteins [BR:
dce03032
]
Prokaryotic type
DNA Topoisomerases
O6P33_01900 (gyrB)
DNA repair and recombination proteins [BR:
dce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O6P33_01900 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Allatotropin-like_C
Motif
Other DBs
NCBI-ProteinID:
WBE25625
UniProt:
A0AAE9VSL2
LinkDB
All DBs
Position
384545..386965
Genome browser
AA seq
806 aa
AA seq
DB search
MSEEQSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFETVDNSIDESLAGHCDE
ISITIHTDESITVQDNGRGIPVDIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GISVVNALSRELVMTIRRQGKVWEQTYHHGVPQAPMTAIGDTDKTGTRIHFKPSPETFAN
IHFSWDILAKRLRELSFLNSGVGIKLKDERTGKEELFQYEGGLKAFVEYLNTNKTTVNNI
FHFSTQREEDGIGVEVAMQWNDGFNENLQCYTNNIPQRDGGAHLVGFRTALTRHLNSYIE
AEGIGKKDKVNTTGDDAREGLTAIISVKVPDPKFSSQTKEKLVSSEVKTAVEQEMGKYLA
DYLLENPAEAKAIVAKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDRMISSQEVGTLITALGCGI
GRDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVK
RGKQEQYIKDDEAMDEYLTNAALEDASLHVNASAPGLSGTALEALVNEYRSVLKTLERLS
RLYPKEITEHFLYLPRVEPEQLSDKAAMQSWLDALQVRMDAVEKSGEVYTVGLRHDSERN
YWLPEIQIKAHGLTNHILFNHDFYSSNDYRTVTELANKLNNLLEEDAYVMRGERKQEIST
FKEALDWLLAEGSRRLSVQRYKGLGEMNPEQLWETTMDPSQRRMLQVTIEDAIAADQIFN
TLMGDHVEPRRAFIEENALAVSNLDF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaacaatcgtacgattccagtagtattaaagtccttaagggcctggatgca
gtgcgcaaacgccctggcatgtatatcggagatactgatgacggcactgggctgcaccac
atggtctttgagaccgtggataactccattgacgaatccctagcaggtcactgcgatgag
attagcattactatccacaccgacgaatccattacagtccaagataacggccgtggtatc
cctgtcgatatccacgaagaagagggcatctctgccgcagaagtcatcatgaccgttctg
cacgccggtggtaagtttgatgacaacagctacaaagtatctggcgggttgcacggcgta
ggtatttccgtcgtaaacgccttatcgcgcgaattggttatgaccatccgccgtcaaggc
aaggtttgggagcaaacctaccaccacggtgttcctcaggcaccgatgacggctattggc
gataccgacaaaaccggtactcgtattcacttcaagccttcgccagaaacctttgccaac
attcactttagttgggatattttagccaagcgcctgcgcgaactgtcattcttgaactct
ggtgttggcatcaagttaaaagatgagcgcaccggtaaagaagagctgtttcagtatgaa
ggtggcttgaaagcttttgttgagtacttaaataccaacaaaaccaccgtaaataatatt
ttccacttctctacccaacgtgaagaagacggcattggcgttgaagttgctatgcagtgg
aatgatggttttaatgaaaaccttcagtgctacaccaacaatattcctcaacgcgatggt
ggggcacacttagtgggcttccgtaccgcattgacgcgccacctcaacagctatattgaa
gctgaaggtattggcaaaaaagataaagtaaacaccaccggtgatgatgcccgtgaaggc
ctcacggcaattatttcggttaaagtacctgaccccaagttcagctcgcaaactaaagaa
aaactggtttcttctgaagttaagaccgcagttgagcaagagatgggaaaatacttagcg
gattacttgctcgaaaaccctgctgaagcaaaagccattgttgcgaagatgattgacgca
gcccgcgcccgtgaagccgcccgtaaagcccgcgaaatgacccgccgcaaaggtgcgcta
gatattgctggtttacccggcaaactggctgactgccaagagaaagaccccgccttatca
gaactctatattgtcgaaggggactctgctggcggctcagccaagcaggggcgtaaccgt
aaaacccaagcgatcttgcccctgaaaggtaagattctaaacgtagaaaaagcacgcttt
gaccggatgatttcatcacaagaagtgggcaccttaatcactgctttaggctgtggtatt
ggccgcgacgaatacaatatcgacaagctgcgctatcacaacatcatcatcatgacggat
gctgacgtggatggttcgcacattcgtacactcttgctgaccttcttcttccgtcagcta
cctgaactggtcgagcgcggctatatctacattgcacaaccacccctgtataaagtaaag
cgtggcaagcaagaacagtacatcaaagatgatgaagcgatggatgagtacttaaccaac
gccgctctggaagatgccagcttacatgtaaatgccagcgcacctggcttatcgggcacc
gctttggaagctctagtcaacgagtaccgttcagtactaaaaaccctagaacgtctctcg
cgcctgtacccgaaagaaattaccgagcactttctctatttgccacgggtagaaccagag
cagttaagcgataaagcagccatgcaatcgtggttagatgctctccaagtgcggatggat
gccgtagaaaaatcaggcgaggtctacactgttggcttacgccatgacagcgagcgcaat
tactggctacctgaaatccaaattaaagcccatggtttaaccaaccatattctgtttaat
catgatttctactccagtaatgattaccgcactgtgacggagttagccaacaagctaaac
aacctcctcgaagaggatgcctatgtgatgcgcggtgagcgtaaacaagaaatcagcacc
tttaaagaggcactggactggttactggcagagggcagtcgccgcttaagcgtacagcgc
tataaaggtcttggtgaaatgaaccccgagcaactctgggaaactaccatggacccaagc
caacgccgtatgctgcaagtgaccattgaggatgctattgccgcagatcagattttcaac
accctaatgggcgaccatgttgaaccgcgtcgcgcctttattgaagaaaacgcgctggct
gtctctaacttagatttttaa
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integrated database retrieval system
