Denitrificimonas caeni: O6P33_02850
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Entry
O6P33_02850 CDS
T08709
Name
(GenBank) RluA family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
dce
Denitrificimonas caeni
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dce03009
]
O6P33_02850
03016 Transfer RNA biogenesis [BR:
dce03016
]
O6P33_02850
Enzymes [BR:
dce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
O6P33_02850
5.4.99.29 23S rRNA pseudouridine746 synthase
O6P33_02850
Ribosome biogenesis [BR:
dce03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
O6P33_02850
Transfer RNA biogenesis [BR:
dce03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
O6P33_02850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WBE25798
LinkDB
All DBs
Position
588323..589042
Genome browser
AA seq
239 aa
AA seq
DB search
MPTTALLPHGALTDFVAPECEALVEILYQDDDILLINKPSGLLSVSGANPLNWDSVYYRL
LHGQEGATPAFPEAKLPHRLDIGTSGIMLVGLHAAATRHLNIQFQQRVIQRRYVAVLEGW
LQHDHGQVSAPIAKDKSIFPRVKICHSSGKAATSQYRVLQRLDQPQRTVVEFTPLTGRTH
QLRIHSLLAGHPILGCELYSSAHSEQMAERLLLHAKDVYFQHPRSGEHIHAQSPCPFYP
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcctactactgctctactgccgcacggcgctttaaccgactttgtcgcgccagagtgt
gaggccttggtggagattctgtatcaagatgatgatattttattgatcaataaacccagt
ggcttgctcagtgtgtctggggctaatccgttgaactgggactcggtgtattaccgctta
ttacatgggcaagagggcgcaactccggccttcccagaggcgaaactgccgcaccgttta
gatattggcacttcagggattatgttggtggggttgcatgcggcggcgacccgtcatctg
aatattcagtttcagcaacgagtgatccaaaggcgttatgtggcggtgctggaggggtgg
ttgcaacatgaccacgggcaagtcagtgcgcccattgctaaagataaaagtatttttccg
cgcgtgaaaatctgtcacagcagcggtaaagcggcgaccagccaataccgggttttgcag
cgtttggatcaaccgcagcgcaccgtggtggagtttaccccgctcacagggcgtactcat
cagttgcgtatccacagtttgttagctggtcaccctatcctgggttgcgagctttatagc
agtgcgcacagtgaacagatggcagagcgcttactgttgcatgccaaggatgtatatttc
cagcacccgcgtagtggcgagcatatccatgcccagagcccttgtccgttttacccatga
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