Denitrificimonas caeni: O6P33_03005
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Entry
O6P33_03005 CDS
T08709
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dce
Denitrificimonas caeni
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dce03009
]
O6P33_03005 (rsmB)
Enzymes [BR:
dce01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
O6P33_03005 (rsmB)
Ribosome biogenesis [BR:
dce03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
O6P33_03005 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltransf_31
FtsJ
Methyltr_RsmF_N
MTS
Methyltransf_11
Methyltransf_23
Ubie_methyltran
PCMT
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
WBE25828
UniProt:
A0AAF0ALS8
LinkDB
All DBs
Position
complement(617193..618506)
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AA seq
437 aa
AA seq
DB search
MNPRLAAARALTAVLAGKASLASSLPTQLERVSDRDKGLVQELAFGTARWQPRLSALAAA
LLSKPFRKADQDVEALLLVGLYQLLYTRIPAHAAISETVGCATALKKPWAKGLLNAVLRR
AQREAETLLPSLEKDPVVLTAHPRWLQKSLKAFWPDDWLNICNANNSHPPFTLRVNQKQG
SRDSYLARLNAAGIAAQATAFSPDGITLAAACEVTALPDFATGAVSVQDEAAQLAAQLLL
LEPKQRVLDACCAPGGKTCHILESQADLGEVVAIDLEPQRLQRVEENLARLQLDATLLAG
DARATEQWWDGEVFQRILLDAPCSATGVIRRHPDIKLTRQADDIAALAQLQGELLDALWP
TLADNGILLYATCSTLPTENTEVIAAFLQRTQDAQELPFTATFGQAQPHGRQLLAQVDGH
DGFYYARLIKQAANSSA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacgcctcgcggcagctcgcgccctgactgcagtactcgctggcaaagcatct
ctagccagcagtttacccacccaattggagcgcgtaagcgaccgcgataaaggcttagta
caagaactcgcttttggtacagcacgctggcaaccacgcttatctgccttagccgcagca
ctattaagcaagccatttcgcaaggccgatcaagatgttgaagcattgctcttagtgggc
ttatatcaacttttatacacccgcatccctgcccacgcagccatttctgaaactgttggc
tgcgccacagcgctgaaaaaaccttgggccaaaggtttactcaatgccgtcttgcgccgc
gcacaacgggaagccgaaaccctcttacccagcttagaaaaagatccggtagtgcttacc
gcgcatccacgctggttacaaaaatccttaaaagcattttggccagatgactggttaaac
atctgcaacgccaataacagtcaccctcccttcaccctacgggttaaccaaaagcagggc
agccgtgacagttatttagcccgccttaatgcagcaggaattgccgcccaggccactgcc
tttagccctgacggaattaccttggctgctgcttgcgaggtgacggccctgcccgacttt
gctacgggtgcagtgagcgtacaagatgaagcggcgcaactggcggcgcagctattgtta
ctcgaacctaagcaacgggtattggacgcctgttgcgcacctggcggcaaaacctgccat
attttagaaagccaagccgacttaggtgaagtggttgccattgatttagagccacaacgc
ttgcagcgcgtagaagaaaatctagcacgcttacagcttgacgccactttactggccggt
gatgcacgggctactgagcaatggtgggacggagaagtttttcagcgtatcttgctcgat
gcgccctgctcagccacaggtgttattcgtcgtcatccggatattaaactcacccgtcaa
gcggatgacattgccgctctggcgcaattacagggtgagttgctcgatgctctgtggccg
acgttggccgataatggcattttattgtacgccacctgctccaccttacccacagaaaat
accgaagtgatcgcggcttttttacaacgcacccaagatgcgcaagagctaccgttcacc
gcaacttttggccaagcacaaccccacggacgccagctccttgcccaagtcgatggccat
gacggcttttactatgcgcgattgatcaagcaagcagccaactcaagcgcttaa
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